RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 TNIP1Q15025 636 aa16.34■□□□□ 0.21
PDLIM5-203ENST00000359265 CST9Q5W186 159 aa16.34■□□□□ 0.21
PDLIM5-203ENST00000359265 RSBN1LQ6PCB5 846 aaPredicted RBP16.34■□□□□ 0.21
PDLIM5-203ENST00000359265 Q6ZUG5 572 aa16.34■□□□□ 0.21
PDLIM5-203ENST00000359265 AMOTL1Q8IY63 956 aa16.34■□□□□ 0.21
PDLIM5-203ENST00000359265 SH3RF3Q8TEJ3 882 aaPredicted RBP16.34■□□□□ 0.21
PDLIM5-203ENST00000359265 INTS4Q96HW7 963 aaKnown RBP16.34■□□□□ 0.21
PDLIM5-203ENST00000359265 KRT23Q9C075 422 aa16.34■□□□□ 0.21
PDLIM5-203ENST00000359265 CWC22Q9HCG8 908 aaKnown RBP16.34■□□□□ 0.21
PDLIM5-203ENST00000359265 DCP1AQ9NPI6 582 aaPredicted RBP16.34■□□□□ 0.21
PDLIM5-203ENST00000359265 KCNQ5Q9NR82 932 aa16.34■□□□□ 0.21
PDLIM5-203ENST00000359265 CHMP5Q9NZZ3 219 aa16.34■□□□□ 0.21
PDLIM5-203ENST00000359265 HACL1Q9UJ83 578 aa16.34■□□□□ 0.21
PDLIM5-203ENST00000359265 DAGLAQ9Y4D2 1042 aa16.34■□□□□ 0.21
PDLIM5-203ENST00000359265 ZNF541Q9H0D2 1346 aa16.34■□□□□ 0.21
PDLIM5-203ENST00000359265 MINDY4BA8MYZ0 360 aa16.33■□□□□ 0.2
PDLIM5-203ENST00000359265 PSMD14O00487 310 aa16.33■□□□□ 0.2
PDLIM5-203ENST00000359265 RAD17O75943 681 aa16.33■□□□□ 0.2
PDLIM5-203ENST00000359265 VIL1P09327 827 aaKnown RBP16.33■□□□□ 0.2
PDLIM5-203ENST00000359265 PCP11498 1178 aaKnown RBP16.33■□□□□ 0.2
PDLIM5-203ENST00000359265 ECE1P42892 770 aa16.33■□□□□ 0.2
PDLIM5-203ENST00000359265 HDLBPQ00341 1268 aaKnown RBP16.33■□□□□ 0.2
PDLIM5-203ENST00000359265 CTDSPL2Q05D32 466 aa16.33■□□□□ 0.2
PDLIM5-203ENST00000359265 COL9A3Q14050 684 aaPredicted RBP16.33■□□□□ 0.2
PDLIM5-203ENST00000359265 SBK1Q52WX2 424 aa16.33■□□□□ 0.2
PDLIM5-203ENST00000359265 CIAPIN1Q6FI81 312 aa16.33■□□□□ 0.2
PDLIM5-203ENST00000359265 HHIPL2Q6UWX4 724 aa16.33■□□□□ 0.2
PDLIM5-203ENST00000359265 MFSD6Q6ZSS7 791 aa16.33■□□□□ 0.2
PDLIM5-203ENST00000359265 TEX11Q8IYF3 940 aa16.33■□□□□ 0.2
PDLIM5-203ENST00000359265 TEKT1Q969V4 418 aa16.33■□□□□ 0.2
PDLIM5-203ENST00000359265 MXD3Q9BW11 206 aa16.33■□□□□ 0.2
PDLIM5-203ENST00000359265 MRIQ9BWK5 157 aa16.33■□□□□ 0.2
PDLIM5-203ENST00000359265 NEDD4P46934 1319 aa16.33■□□□□ 0.2
PDLIM5-203ENST00000359265 PRC1O43663 620 aa16.32■□□□□ 0.2
PDLIM5-203ENST00000359265 SLC3A2P08195 630 aaKnown RBP16.32■□□□□ 0.2
PDLIM5-203ENST00000359265 DDIT3P35638 169 aa16.32■□□□□ 0.2
PDLIM5-203ENST00000359265 MMP14P50281 582 aa16.32■□□□□ 0.2
PDLIM5-203ENST00000359265 FBXL16Q8N461 479 aa16.32■□□□□ 0.2
PDLIM5-203ENST00000359265 AGBL3Q8NEM8 1001 aa16.32■□□□□ 0.2
PDLIM5-203ENST00000359265 AGXT2Q9BYV1 514 aa16.32■□□□□ 0.2
PDLIM5-203ENST00000359265 HDAC9Q9UKV0 1011 aa16.32■□□□□ 0.2
PDLIM5-203ENST00000359265 B4E1Z4 1266 aa16.31■□□□□ 0.2
PDLIM5-203ENST00000359265 USP17L12C9JPN9 530 aa16.31■□□□□ 0.2
PDLIM5-203ENST00000359265 USP17L21D6R901 530 aa16.31■□□□□ 0.2
PDLIM5-203ENST00000359265 FZD9O00144 591 aa16.31■□□□□ 0.2
PDLIM5-203ENST00000359265 LARGE1O95461 756 aa16.31■□□□□ 0.2
PDLIM5-203ENST00000359265 MAP2K2P36507 400 aa16.31■□□□□ 0.2
PDLIM5-203ENST00000359265 CXCL9Q07325 125 aa16.31■□□□□ 0.2
PDLIM5-203ENST00000359265 CTR9Q6PD62 1173 aa16.31■□□□□ 0.2
PDLIM5-203ENST00000359265 KIAA0825Q8IV33 1275 aa16.31■□□□□ 0.2
PDLIM5-203ENST00000359265 BRF1Q92994 677 aa16.31■□□□□ 0.2
PDLIM5-203ENST00000359265 LARP6Q9BRS8 491 aaKnown RBP16.31■□□□□ 0.2
PDLIM5-203ENST00000359265 LRRC2Q9BYS8 371 aa16.31■□□□□ 0.2
PDLIM5-203ENST00000359265 TOMM22Q9NS69 142 aa16.31■□□□□ 0.2
PDLIM5-203ENST00000359265 MCM9Q9NXL9 1143 aa16.31■□□□□ 0.2
PDLIM5-203ENST00000359265 SERPINA10Q9UK55 444 aa16.31■□□□□ 0.2
PDLIM5-203ENST00000359265 TPCN1Q9ULQ1 816 aa16.31■□□□□ 0.2
PDLIM5-203ENST00000359265 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.31■□□□□ 0.2
PDLIM5-203ENST00000359265 ROBO3Q96MS0 1386 aa16.3■□□□□ 0.2
PDLIM5-203ENST00000359265 RPS12P25398 132 aaKnown RBP16.3■□□□□ 0.2
PDLIM5-203ENST00000359265 SCNN1DP51172 638 aa16.3■□□□□ 0.2
PDLIM5-203ENST00000359265 ANTXR2P58335 489 aa16.3■□□□□ 0.2
PDLIM5-203ENST00000359265 RHBDL3P58872 404 aa16.3■□□□□ 0.2
PDLIM5-203ENST00000359265 ME3Q16798 604 aa16.3■□□□□ 0.2
PDLIM5-203ENST00000359265 OGFOD1Q8N543 542 aa16.3■□□□□ 0.2
PDLIM5-203ENST00000359265 TGFBRAP1Q8WUH2 860 aa16.3■□□□□ 0.2
PDLIM5-203ENST00000359265 TMEM87BQ96K49 555 aa16.3■□□□□ 0.2
PDLIM5-203ENST00000359265 CRKP46108 304 aa16.29■□□□□ 0.2
PDLIM5-203ENST00000359265 RRP12Q5JTH9 1297 aaKnown RBP16.29■□□□□ 0.2
PDLIM5-203ENST00000359265 CHST3Q7LGC8 479 aa16.29■□□□□ 0.2
PDLIM5-203ENST00000359265 CCDC83Q8IWF9 413 aa16.29■□□□□ 0.2
PDLIM5-203ENST00000359265 CHMP4CQ96CF2 233 aa16.29■□□□□ 0.2
PDLIM5-203ENST00000359265 ZDHHC15Q96MV8 337 aa16.29■□□□□ 0.2
PDLIM5-203ENST00000359265 MTA3Q9BTC8 594 aa16.29■□□□□ 0.2
PDLIM5-203ENST00000359265 FLT1P17948 1338 aa16.28■□□□□ 0.2
PDLIM5-203ENST00000359265 CYP2D7A0A087X1C5 515 aa16.28■□□□□ 0.2
PDLIM5-203ENST00000359265 TRAF5O00463 557 aa16.28■□□□□ 0.2
PDLIM5-203ENST00000359265 KDM4AO75164 1064 aa16.28■□□□□ 0.2
PDLIM5-203ENST00000359265 NT5C2P49902 561 aa16.28■□□□□ 0.2
PDLIM5-203ENST00000359265 RBM5P52756 815 aaKnown RBP eCLIP16.28■□□□□ 0.2
PDLIM5-203ENST00000359265 SART3Q15020 963 aaKnown RBP16.28■□□□□ 0.2
PDLIM5-203ENST00000359265 CYB5R4Q7L1T6 521 aa16.28■□□□□ 0.2
PDLIM5-203ENST00000359265 PNMA8AQ86V59 439 aaPredicted RBP16.28■□□□□ 0.2
PDLIM5-203ENST00000359265 MAPKAPK5Q8IW41 473 aa16.28■□□□□ 0.2
PDLIM5-203ENST00000359265 ESR2Q92731 530 aa16.28■□□□□ 0.2
PDLIM5-203ENST00000359265 GMLQ99445 158 aa16.28■□□□□ 0.2
PDLIM5-203ENST00000359265 TLL2Q9Y6L7 1015 aa16.28■□□□□ 0.2
PDLIM5-203ENST00000359265 CA12O43570 354 aa16.27■□□□□ 0.2
PDLIM5-203ENST00000359265 ORC4O43929 436 aa16.27■□□□□ 0.2
PDLIM5-203ENST00000359265 POLR3DP05423 398 aaPredicted RBP16.27■□□□□ 0.2
PDLIM5-203ENST00000359265 FGRP09769 529 aa16.27■□□□□ 0.2
PDLIM5-203ENST00000359265 USP17L8P0C7I0 530 aa16.27■□□□□ 0.2
PDLIM5-203ENST00000359265 PDE4BQ07343 736 aa16.27■□□□□ 0.2
PDLIM5-203ENST00000359265 APOBRQ0VD83 1088 aa16.27■□□□□ 0.2
PDLIM5-203ENST00000359265 C12orf60Q5U649 245 aa16.27■□□□□ 0.2
PDLIM5-203ENST00000359265 STK11IPQ8N1F8 1099 aa16.27■□□□□ 0.2
PDLIM5-203ENST00000359265 ZNF274Q96GC6 653 aaPredicted RBP16.27■□□□□ 0.2
PDLIM5-203ENST00000359265 ANGEL1Q9UNK9 670 aaKnown RBP16.27■□□□□ 0.2
PDLIM5-203ENST00000359265 SMC3Q9UQE7 1217 aa16.27■□□□□ 0.2
PDLIM5-203ENST00000359265 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms