RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 CDKL5O76039 1030 aa15.82■□□□□ 0.12
CCDC197-201ENST00000359253 ZSCAN22P10073 491 aaPredicted RBP15.82■□□□□ 0.12
CCDC197-201ENST00000359253 TMEM67Q5HYA8 995 aa15.82■□□□□ 0.12
CCDC197-201ENST00000359253 LARP1BQ659C4 914 aaKnown RBP15.82■□□□□ 0.12
CCDC197-201ENST00000359253 CYB5R4Q7L1T6 521 aa15.82■□□□□ 0.12
CCDC197-201ENST00000359253 USP17L1Q7RTZ2 530 aa15.82■□□□□ 0.12
CCDC197-201ENST00000359253 IQCA1Q86XH1 822 aa15.82■□□□□ 0.12
CCDC197-201ENST00000359253 RRAGCQ9HB90 399 aa15.82■□□□□ 0.12
CCDC197-201ENST00000359253 CCDC69A6NI79 296 aa15.81■□□□□ 0.12
CCDC197-201ENST00000359253 STK3Q13188 491 aa15.81■□□□□ 0.12
CCDC197-201ENST00000359253 DIXDC1Q155Q3 683 aa15.81■□□□□ 0.12
CCDC197-201ENST00000359253 GRIK5Q16478 980 aa15.81■□□□□ 0.12
CCDC197-201ENST00000359253 C12orf60Q5U649 245 aa15.81■□□□□ 0.12
CCDC197-201ENST00000359253 CHST3Q7LGC8 479 aa15.81■□□□□ 0.12
CCDC197-201ENST00000359253 FAM184AQ8NB25 1140 aa15.81■□□□□ 0.12
CCDC197-201ENST00000359253 AGBL3Q8NEM8 1001 aa15.81■□□□□ 0.12
CCDC197-201ENST00000359253 SH3RF3Q8TEJ3 882 aaPredicted RBP15.81■□□□□ 0.12
CCDC197-201ENST00000359253 MYO3BQ8WXR4 1341 aa15.81■□□□□ 0.12
CCDC197-201ENST00000359253 TEKT1Q969V4 418 aa15.81■□□□□ 0.12
CCDC197-201ENST00000359253 ROBO3Q96MS0 1386 aa15.81■□□□□ 0.12
CCDC197-201ENST00000359253 UBAC1Q9BSL1 405 aa15.81■□□□□ 0.12
CCDC197-201ENST00000359253 ZNF541Q9H0D2 1346 aa15.81■□□□□ 0.12
CCDC197-201ENST00000359253 TOMM22Q9NS69 142 aa15.81■□□□□ 0.12
CCDC197-201ENST00000359253 MCM9Q9NXL9 1143 aa15.81■□□□□ 0.12
CCDC197-201ENST00000359253 MYH2Q9UKX2 1941 aa15.81■□□□□ 0.12
CCDC197-201ENST00000359253 TTF2Q9UNY4 1162 aaKnown RBP15.81■□□□□ 0.12
CCDC197-201ENST00000359253 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.81■□□□□ 0.12
CCDC197-201ENST00000359253 NID2Q14112 1375 aa15.8■□□□□ 0.12
CCDC197-201ENST00000359253 CCDC196A0A1B0GTZ2 297 aa15.8■□□□□ 0.12
CCDC197-201ENST00000359253 POTECB2RU33 542 aa15.8■□□□□ 0.12
CCDC197-201ENST00000359253 RAD17O75943 681 aa15.8■□□□□ 0.12
CCDC197-201ENST00000359253 WTAPQ15007 396 aa15.8■□□□□ 0.12
CCDC197-201ENST00000359253 DACT2Q5SW24 774 aa15.8■□□□□ 0.12
CCDC197-201ENST00000359253 PNMA8AQ86V59 439 aaPredicted RBP15.8■□□□□ 0.12
CCDC197-201ENST00000359253 TEX11Q8IYF3 940 aa15.8■□□□□ 0.12
CCDC197-201ENST00000359253 NSUN7Q8NE18 718 aaKnown RBP15.8■□□□□ 0.12
CCDC197-201ENST00000359253 LY9Q9HBG7 655 aa15.8■□□□□ 0.12
CCDC197-201ENST00000359253 DAGLAQ9Y4D2 1042 aa15.8■□□□□ 0.12
CCDC197-201ENST00000359253 GJA3Q9Y6H8 435 aa15.8■□□□□ 0.12
CCDC197-201ENST00000359253 GOLGA8BA8MQT2 603 aa15.79■□□□□ 0.12
CCDC197-201ENST00000359253 PSMD14O00487 310 aa15.79■□□□□ 0.12
CCDC197-201ENST00000359253 CPLX1O14810 134 aa15.79■□□□□ 0.12
CCDC197-201ENST00000359253 ZBTB43O43298 467 aa15.79■□□□□ 0.12
CCDC197-201ENST00000359253 LMOD1P29536 600 aaPredicted RBP15.79■□□□□ 0.12
CCDC197-201ENST00000359253 RHBDL3P58872 404 aa15.79■□□□□ 0.12
CCDC197-201ENST00000359253 PKP1Q13835 747 aa15.79■□□□□ 0.12
CCDC197-201ENST00000359253 RRP12Q5JTH9 1297 aaKnown RBP15.79■□□□□ 0.12
CCDC197-201ENST00000359253 APOA5Q6Q788 366 aa15.79■□□□□ 0.12
CCDC197-201ENST00000359253 NFXL1Q6ZNB6 911 aa15.79■□□□□ 0.12
CCDC197-201ENST00000359253 ZNF526Q8TF50 670 aaPredicted RBP15.79■□□□□ 0.12
CCDC197-201ENST00000359253 TGFBRAP1Q8WUH2 860 aa15.79■□□□□ 0.12
CCDC197-201ENST00000359253 FBXW7Q969H0 707 aa15.79■□□□□ 0.12
CCDC197-201ENST00000359253 HACL1Q9UJ83 578 aa15.79■□□□□ 0.12
CCDC197-201ENST00000359253 BRPF3Q9ULD4 1205 aa15.79■□□□□ 0.12
CCDC197-201ENST00000359253 SLC12A7Q9Y666 1083 aa15.79■□□□□ 0.12
CCDC197-201ENST00000359253 COL4A5P29400 1685 aa15.79■□□□□ 0.12
CCDC197-201ENST00000359253 LAMB1P07942 1786 aa15.78■□□□□ 0.12
CCDC197-201ENST00000359253 KIF3CO14782 793 aa15.78■□□□□ 0.12
CCDC197-201ENST00000359253 NPM3O75607 178 aaKnown RBP15.78■□□□□ 0.12
CCDC197-201ENST00000359253 TOMM70O94826 608 aa15.78■□□□□ 0.12
CCDC197-201ENST00000359253 F13A1P00488 732 aa15.78■□□□□ 0.12
CCDC197-201ENST00000359253 POLR3DP05423 398 aaPredicted RBP15.78■□□□□ 0.12
CCDC197-201ENST00000359253 CALM1P0DP23 149 aa15.78■□□□□ 0.12
CCDC197-201ENST00000359253 CALM2P0DP24 149 aa15.78■□□□□ 0.12
CCDC197-201ENST00000359253 CALM3P0DP25 149 aa15.78■□□□□ 0.12
CCDC197-201ENST00000359253 METAP2P50579 478 aaKnown RBP eCLIP15.78■□□□□ 0.12
CCDC197-201ENST00000359253 CSPP1Q1MSJ5 1256 aa15.78■□□□□ 0.12
CCDC197-201ENST00000359253 RSBN1LQ6PCB5 846 aaPredicted RBP15.78■□□□□ 0.12
CCDC197-201ENST00000359253 CERS5Q8N5B7 392 aa15.78■□□□□ 0.12
CCDC197-201ENST00000359253 ZDHHC15Q96MV8 337 aa15.78■□□□□ 0.12
CCDC197-201ENST00000359253 ZSCAN10Q96SZ4 725 aaPredicted RBP15.78■□□□□ 0.12
CCDC197-201ENST00000359253 ZSCAN16Q9H4T2 348 aaPredicted RBP15.78■□□□□ 0.12
CCDC197-201ENST00000359253 NMRK2Q9NPI5 230 aa15.78■□□□□ 0.12
CCDC197-201ENST00000359253 KCNQ5Q9NR82 932 aa15.78■□□□□ 0.12
CCDC197-201ENST00000359253 GPRC5DQ9NZD1 345 aa15.78■□□□□ 0.12
CCDC197-201ENST00000359253 SERPINA10Q9UK55 444 aa15.78■□□□□ 0.12
CCDC197-201ENST00000359253 NAP1L2Q9ULW6 460 aaPredicted RBP15.78■□□□□ 0.12
CCDC197-201ENST00000359253 HPS5Q9UPZ3 1129 aa15.78■□□□□ 0.12
CCDC197-201ENST00000359253 MTMR6Q9Y217 621 aa15.78■□□□□ 0.12
CCDC197-201ENST00000359253 WDR90Q96KV7 1748 aa15.77■□□□□ 0.12
CCDC197-201ENST00000359253 PTPDC1A2A3K4 754 aa15.77■□□□□ 0.12
CCDC197-201ENST00000359253 H7C1D1 291 aa15.77■□□□□ 0.12
CCDC197-201ENST00000359253 CCT2P78371 535 aaKnown RBP15.77■□□□□ 0.12
CCDC197-201ENST00000359253 TTC6Q86TZ1 520 aa15.77■□□□□ 0.12
CCDC197-201ENST00000359253 TCP11L1Q9NUJ3 509 aa15.77■□□□□ 0.12
CCDC197-201ENST00000359253 TACC3Q9Y6A5 838 aa15.77■□□□□ 0.12
CCDC197-201ENST00000359253 RANBP6O60518 1105 aaKnown RBP15.76■□□□□ 0.11
CCDC197-201ENST00000359253 USP17L8P0C7I0 530 aa15.76■□□□□ 0.11
CCDC197-201ENST00000359253 SCNN1DP51172 638 aa15.76■□□□□ 0.11
CCDC197-201ENST00000359253 SEC23AQ15436 765 aa15.76■□□□□ 0.11
CCDC197-201ENST00000359253 USP50Q70EL3 339 aaPredicted RBP15.76■□□□□ 0.11
CCDC197-201ENST00000359253 ANKS1AQ92625 1134 aa15.76■□□□□ 0.11
CCDC197-201ENST00000359253 GMLQ99445 158 aa15.76■□□□□ 0.11
CCDC197-201ENST00000359253 TAF1DQ9H5J8 278 aaPredicted RBP15.76■□□□□ 0.11
CCDC197-201ENST00000359253 MKNK2Q9HBH9 465 aa15.76■□□□□ 0.11
CCDC197-201ENST00000359253 ADARB2Q9NS39 739 aaKnown RBP15.76■□□□□ 0.11
CCDC197-201ENST00000359253 CNOT7Q9UIV1 285 aaKnown RBP15.76■□□□□ 0.11
CCDC197-201ENST00000359253 FLT1P17948 1338 aa15.75■□□□□ 0.11
CCDC197-201ENST00000359253 BAZ2AQ9UIF9 1905 aaKnown RBP15.75■□□□□ 0.11
CCDC197-201ENST00000359253 H3BQV1 296 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms