RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 PAIP2Q9BPZ3 127 aaKnown RBP15.4■□□□□ 0.06
VCP-201ENST00000358901 RASAL2Q9UJF2 1139 aa15.4■□□□□ 0.06
VCP-201ENST00000358901 DBNLQ9UJU6 430 aaKnown RBP15.4■□□□□ 0.06
VCP-201ENST00000358901 ACTN2P35609 894 aa15.4■□□□□ 0.06
VCP-201ENST00000358901 MRFAP1L1Q96HT8 127 aa15.4■□□□□ 0.06
VCP-201ENST00000358901 PSMB7Q99436 277 aa15.4■□□□□ 0.06
VCP-201ENST00000358901 KDRP35968 1356 aa15.4■□□□□ 0.06
VCP-201ENST00000358901 ETF1P62495 437 aaKnown RBP15.39■□□□□ 0.05
VCP-201ENST00000358901 PARP10Q53GL7 1025 aa15.39■□□□□ 0.05
VCP-201ENST00000358901 LRRC8AQ8IWT6 810 aa15.39■□□□□ 0.05
VCP-201ENST00000358901 AATFQ9NY61 560 aaKnown RBP eCLIP15.39■□□□□ 0.05
VCP-201ENST00000358901 CPLX4Q7Z7G2 160 aa15.39■□□□□ 0.05
VCP-201ENST00000358901 CCDC65Q8IXS2 484 aa15.39■□□□□ 0.05
VCP-201ENST00000358901 JAKMIP2Q96AA8 810 aa15.39■□□□□ 0.05
VCP-201ENST00000358901 DESI2Q9BSY9 194 aa15.39■□□□□ 0.05
VCP-201ENST00000358901 BLZF1Q9H2G9 400 aa15.39■□□□□ 0.05
VCP-201ENST00000358901 RTCBQ9Y3I0 505 aaKnown RBP15.39■□□□□ 0.05
VCP-201ENST00000358901 CYP21A2P08686 494 aa15.39■□□□□ 0.05
VCP-201ENST00000358901 MRPL12P52815 198 aaKnown RBP15.39■□□□□ 0.05
VCP-201ENST00000358901 SCRN1Q12765 414 aa15.39■□□□□ 0.05
VCP-201ENST00000358901 TCIRG1Q13488 830 aa15.39■□□□□ 0.05
VCP-201ENST00000358901 LRRC24Q50LG9 513 aa15.39■□□□□ 0.05
VCP-201ENST00000358901 USP37Q86T82 979 aa15.39■□□□□ 0.05
VCP-201ENST00000358901 GJC1P36383 396 aa15.38■□□□□ 0.05
VCP-201ENST00000358901 PPP1R2P41236 205 aa15.38■□□□□ 0.05
VCP-201ENST00000358901 NDUFA8P51970 172 aa15.38■□□□□ 0.05
VCP-201ENST00000358901 FBXO18Q8NFZ0 1043 aa15.38■□□□□ 0.05
VCP-201ENST00000358901 FERMT2Q96AC1 680 aa15.38■□□□□ 0.05
VCP-201ENST00000358901 GPCPD1Q9NPB8 672 aa15.38■□□□□ 0.05
VCP-201ENST00000358901 BTBD18B2RXH4 712 aa15.38■□□□□ 0.05
VCP-201ENST00000358901 HSPA2P54652 639 aa15.38■□□□□ 0.05
VCP-201ENST00000358901 EIF6P56537 245 aaKnown RBP15.38■□□□□ 0.05
VCP-201ENST00000358901 PLS1Q14651 629 aa15.38■□□□□ 0.05
VCP-201ENST00000358901 DDX17Q92841 729 aaKnown RBP15.38■□□□□ 0.05
VCP-201ENST00000358901 SELENOSQ9BQE4 189 aa15.38■□□□□ 0.05
VCP-201ENST00000358901 COPRSQ9NQ92 184 aa15.38■□□□□ 0.05
VCP-201ENST00000358901 RIMBP2O15034 1052 aa15.38■□□□□ 0.05
VCP-201ENST00000358901 CCNT1O60563 726 aaKnown RBP15.38■□□□□ 0.05
VCP-201ENST00000358901 CMA1P23946 247 aa15.38■□□□□ 0.05
VCP-201ENST00000358901 PDIA3P30101 505 aaKnown RBP15.38■□□□□ 0.05
VCP-201ENST00000358901 C8orf74Q6P047 294 aa15.38■□□□□ 0.05
VCP-201ENST00000358901 CNNM4Q6P4Q7 775 aa15.38■□□□□ 0.05
VCP-201ENST00000358901 NOSTRINQ8IVI9 506 aa15.38■□□□□ 0.05
VCP-201ENST00000358901 ZNF654Q8IZM8 581 aa15.38■□□□□ 0.05
VCP-201ENST00000358901 TSGA10Q9BZW7 698 aa15.38■□□□□ 0.05
VCP-201ENST00000358901 FANCLQ9NW38 375 aa15.38■□□□□ 0.05
VCP-201ENST00000358901 MAGEA1P43355 309 aa15.38■□□□□ 0.05
VCP-201ENST00000358901 TUBB2AQ13885 445 aa15.38■□□□□ 0.05
VCP-201ENST00000358901 PPP2R5BQ15173 497 aa15.38■□□□□ 0.05
VCP-201ENST00000358901 CCDC25Q86WR0 208 aa15.38■□□□□ 0.05
VCP-201ENST00000358901 TUBB2BQ9BVA1 445 aa15.38■□□□□ 0.05
VCP-201ENST00000358901 HOMER2Q9NSB8 354 aa15.38■□□□□ 0.05
VCP-201ENST00000358901 IKBKGQ9Y6K9 419 aa15.38■□□□□ 0.05
VCP-201ENST00000358901 MYOM2P54296 1465 aa15.37■□□□□ 0.05
VCP-201ENST00000358901 GTF2A1P52655 376 aaPredicted RBP15.37■□□□□ 0.05
VCP-201ENST00000358901 UTP14CQ5TAP6 766 aaKnown RBP15.37■□□□□ 0.05
VCP-201ENST00000358901 CCDC121Q6ZUS5 278 aa15.37■□□□□ 0.05
VCP-201ENST00000358901 CCDC77Q9BR77 488 aa15.37■□□□□ 0.05
VCP-201ENST00000358901 AATKQ6ZMQ8 1374 aa15.37■□□□□ 0.05
VCP-201ENST00000358901 A0A087WWV3 80 aa15.37■□□□□ 0.05
VCP-201ENST00000358901 KIF4AO95239 1232 aa15.37■□□□□ 0.05
VCP-201ENST00000358901 RPL13P26373 211 aaKnown RBP15.37■□□□□ 0.05
VCP-201ENST00000358901 ZNF589Q86UQ0 364 aaPredicted RBP15.37■□□□□ 0.05
VCP-201ENST00000358901 CLIC6Q96NY7 704 aa15.37■□□□□ 0.05
VCP-201ENST00000358901 TFCP2L1Q9NZI6 479 aa15.37■□□□□ 0.05
VCP-201ENST00000358901 TMEM2Q9UHN6 1383 aa15.37■□□□□ 0.05
VCP-201ENST00000358901 ARHGEF5Q12774 1597 aa15.37■□□□□ 0.05
VCP-201ENST00000358901 FBF1Q8TES7 1133 aa15.37■□□□□ 0.05
VCP-201ENST00000358901 RABEP2Q9H5N1 569 aa15.37■□□□□ 0.05
VCP-201ENST00000358901 PLCB3Q01970 1234 aa15.36■□□□□ 0.05
VCP-201ENST00000358901 AFAP1L1Q8TED9 768 aa15.36■□□□□ 0.05
VCP-201ENST00000358901 NELFBQ8WX92 580 aa15.36■□□□□ 0.05
VCP-201ENST00000358901 TCHPQ9BT92 498 aa15.36■□□□□ 0.05
VCP-201ENST00000358901 PDE6AP16499 860 aa15.36■□□□□ 0.05
VCP-201ENST00000358901 DYMQ7RTS9 669 aa15.36■□□□□ 0.05
VCP-201ENST00000358901 NSRP1Q9H0G5 558 aaKnown RBP15.36■□□□□ 0.05
VCP-201ENST00000358901 RASSF4Q9H2L5 321 aa15.36■□□□□ 0.05
VCP-201ENST00000358901 LRWD1Q9UFC0 647 aa15.36■□□□□ 0.05
VCP-201ENST00000358901 CLIC4Q9Y696 253 aa15.36■□□□□ 0.05
VCP-201ENST00000358901 CEP57Q86XR8 500 aa15.36■□□□□ 0.05
VCP-201ENST00000358901 SECISBP2LQ93073 1101 aaKnown RBP15.36■□□□□ 0.05
VCP-201ENST00000358901 GDAP1L1Q96MZ0 367 aa15.36■□□□□ 0.05
VCP-201ENST00000358901 EEF2P13639 858 aaKnown RBP15.36■□□□□ 0.05
VCP-201ENST00000358901 OAS2P29728 719 aaKnown RBP15.36■□□□□ 0.05
VCP-201ENST00000358901 HPDP32754 393 aaPredicted RBP15.36■□□□□ 0.05
VCP-201ENST00000358901 CCDC24Q8N4L8 307 aa15.36■□□□□ 0.05
VCP-201ENST00000358901 WWC3Q9ULE0 1092 aa15.36■□□□□ 0.05
VCP-201ENST00000358901 UGGT1Q9NYU2 1555 aa15.35■□□□□ 0.05
VCP-201ENST00000358901 PHKG2P15735 406 aa15.35■□□□□ 0.05
VCP-201ENST00000358901 OGFOD1Q8N543 542 aa15.35■□□□□ 0.05
VCP-201ENST00000358901 ATP6V0A2Q9Y487 856 aa15.35■□□□□ 0.05
VCP-201ENST00000358901 PLA2R1Q13018 1463 aa15.35■□□□□ 0.05
VCP-201ENST00000358901 ADGBQ8N7X0 1667 aa15.35■□□□□ 0.05
VCP-201ENST00000358901 NDUFAB1O14561 156 aa15.35■□□□□ 0.05
VCP-201ENST00000358901 LARGE1O95461 756 aa15.35■□□□□ 0.05
VCP-201ENST00000358901 NONOQ15233 471 aaKnown RBP eCLIP15.35■□□□□ 0.05
VCP-201ENST00000358901 UBLCP1Q8WVY7 318 aaPredicted RBP15.35■□□□□ 0.05
VCP-201ENST00000358901 CCDC114Q96M63 670 aa15.35■□□□□ 0.05
VCP-201ENST00000358901 FTOQ9C0B1 505 aaKnown RBP eCLIP15.35■□□□□ 0.05
VCP-201ENST00000358901 SYNMO15061 1565 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms