RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.88□□□□□ -0.83
RFX3-202ENST00000358730 V9GYY5 206 aaPredicted RBP9.88□□□□□ -0.83
RFX3-202ENST00000358730 MYH6P13533 1939 aa9.88□□□□□ -0.83
RFX3-202ENST00000358730 PNPLA7Q6ZV29 1317 aa9.88□□□□□ -0.83
RFX3-202ENST00000358730 CBFA2T2O43439 604 aa9.88□□□□□ -0.83
RFX3-202ENST00000358730 IGHMBP2P38935 993 aaKnown RBP9.88□□□□□ -0.83
RFX3-202ENST00000358730 CCDC152Q4G0S7 254 aa9.88□□□□□ -0.83
RFX3-202ENST00000358730 CMTR1Q8N1G2 835 aaKnown RBP9.88□□□□□ -0.83
RFX3-202ENST00000358730 NUP133Q8WUM0 1156 aa9.88□□□□□ -0.83
RFX3-202ENST00000358730 PCDHA5Q9Y5H7 936 aa9.88□□□□□ -0.83
RFX3-202ENST00000358730 WNK3Q9BYP7 1800 aa9.88□□□□□ -0.83
RFX3-202ENST00000358730 PSDA5PKW4 1024 aaPredicted RBP9.87□□□□□ -0.83
RFX3-202ENST00000358730 KCNJ6P48051 423 aa9.87□□□□□ -0.83
RFX3-202ENST00000358730 EIF5P55010 431 aaKnown RBP9.87□□□□□ -0.83
RFX3-202ENST00000358730 DPF2Q92785 391 aa9.87□□□□□ -0.83
RFX3-202ENST00000358730 HOOK1Q9UJC3 728 aaKnown RBP9.87□□□□□ -0.83
RFX3-202ENST00000358730 FOXN1O15353 648 aa9.87□□□□□ -0.83
RFX3-202ENST00000358730 DEXIO95424 95 aa9.87□□□□□ -0.83
RFX3-202ENST00000358730 TOB1P50616 345 aaPredicted RBP9.87□□□□□ -0.83
RFX3-202ENST00000358730 GRIN1Q05586 938 aa9.87□□□□□ -0.83
RFX3-202ENST00000358730 ERO1AQ96HE7 468 aa9.87□□□□□ -0.83
RFX3-202ENST00000358730 UBAC1Q9BSL1 405 aa9.87□□□□□ -0.83
RFX3-202ENST00000358730 RNF41Q9H4P4 317 aaPredicted RBP9.87□□□□□ -0.83
RFX3-202ENST00000358730 CCDC87Q9NVE4 849 aa9.87□□□□□ -0.83
RFX3-202ENST00000358730 IQSEC3Q9UPP2 1182 aaPredicted RBP9.87□□□□□ -0.83
RFX3-202ENST00000358730 CCDC196A0A1B0GTZ2 297 aa9.87□□□□□ -0.83
RFX3-202ENST00000358730 CRKLP46109 303 aaKnown RBP9.87□□□□□ -0.83
RFX3-202ENST00000358730 NR5A1Q13285 461 aa9.87□□□□□ -0.83
RFX3-202ENST00000358730 RILPL1Q5EBL4 403 aa9.87□□□□□ -0.83
RFX3-202ENST00000358730 SYT10Q6XYQ8 523 aa9.87□□□□□ -0.83
RFX3-202ENST00000358730 FOXP4Q8IVH2 680 aaPredicted RBP9.87□□□□□ -0.83
RFX3-202ENST00000358730 ZNF654Q8IZM8 581 aa9.87□□□□□ -0.83
RFX3-202ENST00000358730 PKNOX2Q96KN3 472 aa9.87□□□□□ -0.83
RFX3-202ENST00000358730 FEZ1Q99689 392 aa9.87□□□□□ -0.83
RFX3-202ENST00000358730 FOXP1Q9H334 677 aaPredicted RBP9.87□□□□□ -0.83
RFX3-202ENST00000358730 FANCLQ9NW38 375 aa9.87□□□□□ -0.83
RFX3-202ENST00000358730 LAMB2P55268 1798 aa9.86□□□□□ -0.83
RFX3-202ENST00000358730 SLU7O95391 586 aaKnown RBP9.86□□□□□ -0.83
RFX3-202ENST00000358730 CYP7A1P22680 504 aa9.86□□□□□ -0.83
RFX3-202ENST00000358730 PPARAQ07869 468 aa9.86□□□□□ -0.83
RFX3-202ENST00000358730 POSTNQ15063 836 aa9.86□□□□□ -0.83
RFX3-202ENST00000358730 ELF2Q15723 593 aa9.86□□□□□ -0.83
RFX3-202ENST00000358730 INTS5Q6P9B9 1019 aaKnown RBP9.86□□□□□ -0.83
RFX3-202ENST00000358730 CRACR2BQ8N4Y2 399 aaPredicted RBP9.86□□□□□ -0.83
RFX3-202ENST00000358730 SDR42E1Q8WUS8 393 aa9.86□□□□□ -0.83
RFX3-202ENST00000358730 FBXO2Q9UK22 296 aaPredicted RBP9.86□□□□□ -0.83
RFX3-202ENST00000358730 MINDY4BA8MYZ0 360 aa9.86□□□□□ -0.83
RFX3-202ENST00000358730 TMEM232C9JQI7 657 aa9.86□□□□□ -0.83
RFX3-202ENST00000358730 POLR2DO15514 142 aaKnown RBP9.86□□□□□ -0.83
RFX3-202ENST00000358730 TOP1P11387 765 aaKnown RBP9.86□□□□□ -0.83
RFX3-202ENST00000358730 ATP2B1P20020 1258 aa9.86□□□□□ -0.83
RFX3-202ENST00000358730 BMP6P22004 513 aa9.86□□□□□ -0.83
RFX3-202ENST00000358730 PTPREP23469 700 aa9.86□□□□□ -0.83
RFX3-202ENST00000358730 CHRNDQ07001 517 aa9.86□□□□□ -0.83
RFX3-202ENST00000358730 PDE4BQ07343 736 aa9.86□□□□□ -0.83
RFX3-202ENST00000358730 PTPN21Q16825 1174 aa9.86□□□□□ -0.83
RFX3-202ENST00000358730 PARP10Q53GL7 1025 aa9.86□□□□□ -0.83
RFX3-202ENST00000358730 HSP90AA4PQ58FG1 418 aa9.86□□□□□ -0.83
RFX3-202ENST00000358730 HOMER1Q86YM7 354 aa9.86□□□□□ -0.83
RFX3-202ENST00000358730 VSTM4Q8IW00 320 aa9.86□□□□□ -0.83
RFX3-202ENST00000358730 ABCF2Q9UG63 623 aa9.86□□□□□ -0.83
RFX3-202ENST00000358730 NIP7Q9Y221 180 aaKnown RBP eCLIP9.86□□□□□ -0.83
RFX3-202ENST00000358730 PCDHB6Q9Y5E3 794 aa9.86□□□□□ -0.83
RFX3-202ENST00000358730 MYO1BO43795 1136 aa9.85□□□□□ -0.83
RFX3-202ENST00000358730 PRR29P0C7W0 189 aa9.85□□□□□ -0.83
RFX3-202ENST00000358730 ZSCAN20P17040 1043 aaPredicted RBP9.85□□□□□ -0.83
RFX3-202ENST00000358730 ATP6V1AP38606 617 aa9.85□□□□□ -0.83
RFX3-202ENST00000358730 ADGRA1Q86SQ6 560 aa9.85□□□□□ -0.83
RFX3-202ENST00000358730 TMTC2Q8N394 836 aa9.85□□□□□ -0.83
RFX3-202ENST00000358730 FANCBQ8NB91 859 aa9.85□□□□□ -0.83
RFX3-202ENST00000358730 MAN1B1Q9UKM7 699 aa9.85□□□□□ -0.83
RFX3-202ENST00000358730 TNKSO95271 1327 aa9.85□□□□□ -0.83
RFX3-202ENST00000358730 MYH2Q9UKX2 1941 aa9.85□□□□□ -0.83
RFX3-202ENST00000358730 CICQ96RK0 1608 aaPredicted RBP9.85□□□□□ -0.83
RFX3-202ENST00000358730 CCP110O43303 1012 aa9.85□□□□□ -0.83
RFX3-202ENST00000358730 CAMTA2O94983 1202 aa9.85□□□□□ -0.83
RFX3-202ENST00000358730 NTSR2O95665 410 aa9.85□□□□□ -0.83
RFX3-202ENST00000358730 GOLGA8FQ08AF8 430 aa9.85□□□□□ -0.83
RFX3-202ENST00000358730 GOLGA8DPQ0D2H9 430 aa9.85□□□□□ -0.83
RFX3-202ENST00000358730 ZNF827Q17R98 1081 aa9.85□□□□□ -0.83
RFX3-202ENST00000358730 PDILTQ8N807 584 aa9.85□□□□□ -0.83
RFX3-202ENST00000358730 ZNF397Q8NF99 534 aaPredicted RBP9.85□□□□□ -0.83
RFX3-202ENST00000358730 OXER1Q8TDS5 423 aa9.85□□□□□ -0.83
RFX3-202ENST00000358730 RAI14Q9P0K7 980 aa9.85□□□□□ -0.83
RFX3-202ENST00000358730 RTL9Q8NET4 1388 aa9.85□□□□□ -0.83
RFX3-202ENST00000358730 BAZ2AQ9UIF9 1905 aaKnown RBP9.85□□□□□ -0.83
RFX3-202ENST00000358730 BCL9LQ86UU0 1499 aa9.85□□□□□ -0.83
RFX3-202ENST00000358730 COL16A1Q07092 1604 aaPredicted RBP9.85□□□□□ -0.83
RFX3-202ENST00000358730 RCAN1P53805 252 aa9.84□□□□□ -0.83
RFX3-202ENST00000358730 MDM2Q00987 491 aaPredicted RBP9.84□□□□□ -0.83
RFX3-202ENST00000358730 ESR2Q92731 530 aa9.84□□□□□ -0.83
RFX3-202ENST00000358730 SMARCE1Q969G3 411 aa9.84□□□□□ -0.83
RFX3-202ENST00000358730 ACSBG1Q96GR2 724 aa9.84□□□□□ -0.83
RFX3-202ENST00000358730 MTA3Q9BTC8 594 aa9.84□□□□□ -0.83
RFX3-202ENST00000358730 OGFRQ9NZT2 677 aa9.84□□□□□ -0.83
RFX3-202ENST00000358730 SERTAD1Q9UHV2 236 aa9.84□□□□□ -0.83
RFX3-202ENST00000358730 CEP131Q9UPN4 1083 aa9.84□□□□□ -0.83
RFX3-202ENST00000358730 COL4A1P02462 1669 aa9.84□□□□□ -0.83
RFX3-202ENST00000358730 MYH14Q7Z406 1995 aaKnown RBP9.84□□□□□ -0.83
RFX3-202ENST00000358730 MAGEB6P1A0A0J9YX57 407 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms