RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 MYO1AQ9UBC5 1043 aa9.75□□□□□ -0.85
COL6A6-201ENST00000358511 HSP90AA5PQ58FG0 334 aa9.75□□□□□ -0.85
COL6A6-201ENST00000358511 ZSCAN29Q8IWY8 852 aaPredicted RBP9.75□□□□□ -0.85
COL6A6-201ENST00000358511 GSDMBQ8TAX9 411 aa9.75□□□□□ -0.85
COL6A6-201ENST00000358511 FLOT1O75955 427 aa9.75□□□□□ -0.85
COL6A6-201ENST00000358511 SLMAPQ14BN4 828 aa9.75□□□□□ -0.85
COL6A6-201ENST00000358511 MIER3Q7Z3K6 550 aa9.75□□□□□ -0.85
COL6A6-201ENST00000358511 LONRF2Q1L5Z9 754 aa9.75□□□□□ -0.85
COL6A6-201ENST00000358511 CCDC84Q86UT8 332 aaPredicted RBP9.75□□□□□ -0.85
COL6A6-201ENST00000358511 ZMAT2Q96NC0 199 aaKnown RBP9.75□□□□□ -0.85
COL6A6-201ENST00000358511 NUCKS1Q9H1E3 243 aaKnown RBP9.75□□□□□ -0.85
COL6A6-201ENST00000358511 PYCARDQ9ULZ3 195 aa9.75□□□□□ -0.85
COL6A6-201ENST00000358511 CLCN6P51797 869 aa9.75□□□□□ -0.85
COL6A6-201ENST00000358511 ADKP55263 362 aaKnown RBP9.75□□□□□ -0.85
COL6A6-201ENST00000358511 SESN3P58005 492 aa9.75□□□□□ -0.85
COL6A6-201ENST00000358511 HEATR3Q7Z4Q2 680 aa9.75□□□□□ -0.85
COL6A6-201ENST00000358511 TADA2BQ86TJ2 420 aa9.75□□□□□ -0.85
COL6A6-201ENST00000358511 TXNDC9O14530 226 aa9.75□□□□□ -0.85
COL6A6-201ENST00000358511 HGSO14964 777 aaPredicted RBP9.75□□□□□ -0.85
COL6A6-201ENST00000358511 GNAT2P19087 354 aa9.75□□□□□ -0.85
COL6A6-201ENST00000358511 SSX2IPQ9Y2D8 614 aa9.75□□□□□ -0.85
COL6A6-201ENST00000358511 RPL13P26373 211 aaKnown RBP9.75□□□□□ -0.85
COL6A6-201ENST00000358511 CHPF2Q9P2E5 772 aa9.75□□□□□ -0.85
COL6A6-201ENST00000358511 KIAA0586Q9BVV6 1533 aa9.75□□□□□ -0.85
COL6A6-201ENST00000358511 NPC1L1Q9UHC9 1359 aa9.74□□□□□ -0.85
COL6A6-201ENST00000358511 PPFIA2O75334 1257 aa9.74□□□□□ -0.85
COL6A6-201ENST00000358511 FBXO38Q6PIJ6 1188 aa9.74□□□□□ -0.85
COL6A6-201ENST00000358511 SLF1Q9BQI6 1058 aa9.74□□□□□ -0.85
COL6A6-201ENST00000358511 ANKRD20A3Q5VUR7 823 aa9.74□□□□□ -0.85
COL6A6-201ENST00000358511 SRGAP1Q7Z6B7 1085 aa9.74□□□□□ -0.85
COL6A6-201ENST00000358511 NME9Q86XW9 330 aa9.74□□□□□ -0.85
COL6A6-201ENST00000358511 SLC27A2O14975 620 aa9.74□□□□□ -0.85
COL6A6-201ENST00000358511 PLCD1P51178 756 aa9.74□□□□□ -0.85
COL6A6-201ENST00000358511 DESI2Q9BSY9 194 aa9.74□□□□□ -0.85
COL6A6-201ENST00000358511 BICC1Q9H694 974 aaKnown RBP9.74□□□□□ -0.85
COL6A6-201ENST00000358511 STMN1P16949 149 aa9.74□□□□□ -0.85
COL6A6-201ENST00000358511 STX2P32856 288 aa9.74□□□□□ -0.85
COL6A6-201ENST00000358511 RNASE9P60153 205 aaKnown RBP9.74□□□□□ -0.85
COL6A6-201ENST00000358511 GUCY2FP51841 1108 aa9.74□□□□□ -0.85
COL6A6-201ENST00000358511 HHATQ5VTY9 493 aa9.74□□□□□ -0.85
COL6A6-201ENST00000358511 ZNF710Q8N1W2 664 aa9.74□□□□□ -0.85
COL6A6-201ENST00000358511 SGSM2O43147 1006 aa9.74□□□□□ -0.85
COL6A6-201ENST00000358511 SEPT2Q15019 361 aa9.74□□□□□ -0.85
COL6A6-201ENST00000358511 RASIP1Q5U651 963 aa9.74□□□□□ -0.85
COL6A6-201ENST00000358511 PSMB7Q99436 277 aa9.74□□□□□ -0.85
COL6A6-201ENST00000358511 SNX14Q9Y5W7 946 aa9.74□□□□□ -0.85
COL6A6-201ENST00000358511 STX10O60499 249 aa9.74□□□□□ -0.85
COL6A6-201ENST00000358511 ALDH1L1O75891 902 aa9.74□□□□□ -0.85
COL6A6-201ENST00000358511 RPS6KA1Q15418 735 aa9.74□□□□□ -0.85
COL6A6-201ENST00000358511 NBPF14Q5TI25 921 aa9.74□□□□□ -0.85
COL6A6-201ENST00000358511 FRMD4BQ9Y2L6 1034 aa9.74□□□□□ -0.85
COL6A6-201ENST00000358511 KAT6AQ92794 2004 aa9.74□□□□□ -0.85
COL6A6-201ENST00000358511 TCOF1Q13428 1488 aaKnown RBP9.74□□□□□ -0.85
COL6A6-201ENST00000358511 SPOPO43791 374 aa9.74□□□□□ -0.85
COL6A6-201ENST00000358511 ERCC5P28715 1186 aaPredicted RBP9.74□□□□□ -0.85
COL6A6-201ENST00000358511 NCBP1Q09161 790 aaKnown RBP9.74□□□□□ -0.85
COL6A6-201ENST00000358511 CSGALNACT2Q8N6G5 542 aa9.74□□□□□ -0.85
COL6A6-201ENST00000358511 CCDC197Q8NCU1 140 aa9.74□□□□□ -0.85
COL6A6-201ENST00000358511 ABCC1P33527 1531 aa9.73□□□□□ -0.85
COL6A6-201ENST00000358511 SYCP2Q9BX26 1530 aa9.73□□□□□ -0.85
COL6A6-201ENST00000358511 ZBTB7BO15156 539 aaPredicted RBP9.73□□□□□ -0.85
COL6A6-201ENST00000358511 UAP1Q16222 522 aaPredicted RBP9.73□□□□□ -0.85
COL6A6-201ENST00000358511 TOM1L2Q6ZVM7 507 aa9.73□□□□□ -0.85
COL6A6-201ENST00000358511 CHST3Q7LGC8 479 aa9.73□□□□□ -0.85
COL6A6-201ENST00000358511 CRACR2BQ8N4Y2 399 aaPredicted RBP9.73□□□□□ -0.85
COL6A6-201ENST00000358511 C8orf58Q8NAV2 365 aa9.73□□□□□ -0.85
COL6A6-201ENST00000358511 CRNKL1Q9BZJ0 848 aaKnown RBP9.73□□□□□ -0.85
COL6A6-201ENST00000358511 ACTR5Q9H9F9 607 aaPredicted RBP9.73□□□□□ -0.85
COL6A6-201ENST00000358511 RPSAP08865 295 aaKnown RBP9.73□□□□□ -0.85
COL6A6-201ENST00000358511 LONRF3Q496Y0 759 aa9.73□□□□□ -0.85
COL6A6-201ENST00000358511 SUN1O94901 812 aa9.73□□□□□ -0.85
COL6A6-201ENST00000358511 BAG3O95817 575 aa9.73□□□□□ -0.85
COL6A6-201ENST00000358511 TRIM31Q9BZY9 425 aa9.73□□□□□ -0.85
COL6A6-201ENST00000358511 SNRKQ9NRH2 765 aa9.73□□□□□ -0.85
COL6A6-201ENST00000358511 UQCRFS1P1P0C7P4 283 aa9.73□□□□□ -0.85
COL6A6-201ENST00000358511 HS2ST1Q7LGA3 356 aa9.73□□□□□ -0.85
COL6A6-201ENST00000358511 PEX26Q7Z412 305 aa9.73□□□□□ -0.85
COL6A6-201ENST00000358511 TRIM6Q9C030 488 aaPredicted RBP9.73□□□□□ -0.85
COL6A6-201ENST00000358511 TDRD7Q8NHU6 1098 aaKnown RBP9.73□□□□□ -0.85
COL6A6-201ENST00000358511 ANKIB1Q9P2G1 1089 aa9.73□□□□□ -0.85
COL6A6-201ENST00000358511 MYH8P13535 1937 aa9.73□□□□□ -0.85
COL6A6-201ENST00000358511 KIF24Q5T7B8 1368 aa9.73□□□□□ -0.85
COL6A6-201ENST00000358511 TROVE2P10155 538 aaKnown RBP eCLIP9.73□□□□□ -0.85
COL6A6-201ENST00000358511 EPB41P11171 864 aaKnown RBP9.73□□□□□ -0.85
COL6A6-201ENST00000358511 HNRNPH2P55795 449 aaKnown RBP9.73□□□□□ -0.85
COL6A6-201ENST00000358511 DCAF17Q5H9S7 520 aaPredicted RBP9.73□□□□□ -0.85
COL6A6-201ENST00000358511 ADALQ6DHV7 355 aa9.73□□□□□ -0.85
COL6A6-201ENST00000358511 STX8Q9UNK0 236 aa9.73□□□□□ -0.85
COL6A6-201ENST00000358511 FAF1Q9UNN5 650 aaPredicted RBP9.73□□□□□ -0.85
COL6A6-201ENST00000358511 TNNQ9UQP3 1299 aa9.73□□□□□ -0.85
COL6A6-201ENST00000358511 BAZ2BQ9UIF8 2168 aaKnown RBP9.73□□□□□ -0.85
COL6A6-201ENST00000358511 VAMP4O75379 141 aa9.73□□□□□ -0.85
COL6A6-201ENST00000358511 NAPAP54920 295 aa9.73□□□□□ -0.85
COL6A6-201ENST00000358511 ASIC2Q16515 512 aa9.73□□□□□ -0.85
COL6A6-201ENST00000358511 KIFAP3Q92845 792 aa9.73□□□□□ -0.85
COL6A6-201ENST00000358511 IMPG2Q9BZV3 1241 aa9.73□□□□□ -0.85
COL6A6-201ENST00000358511 PPP1R9AQ9ULJ8 1098 aa9.73□□□□□ -0.85
COL6A6-201ENST00000358511 GNA11P29992 359 aa9.72□□□□□ -0.85
COL6A6-201ENST00000358511 RBM6P78332 1123 aaKnown RBP9.72□□□□□ -0.85
COL6A6-201ENST00000358511 SCOCQ9UIL1 159 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms