RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 IQCDQ96DY2 449 aa16.55■□□□□ 0.24
CHD4-201ENST00000357008 VSIG1Q86XK7 387 aa16.55■□□□□ 0.24
CHD4-201ENST00000357008 CHL1O00533 1208 aa16.55■□□□□ 0.24
CHD4-201ENST00000357008 GPAA1O43292 621 aa16.55■□□□□ 0.24
CHD4-201ENST00000357008 TSNAXIP1Q2TAA8 658 aa16.55■□□□□ 0.24
CHD4-201ENST00000357008 WDR44Q5JSH3 913 aa16.55■□□□□ 0.24
CHD4-201ENST00000357008 FAM212AQ96EL1 285 aa16.55■□□□□ 0.24
CHD4-201ENST00000357008 FEZ2Q9UHY8 353 aaPredicted RBP16.55■□□□□ 0.24
CHD4-201ENST00000357008 UAP1Q16222 522 aaPredicted RBP16.54■□□□□ 0.24
CHD4-201ENST00000357008 TTC6Q86TZ1 520 aa16.54■□□□□ 0.24
CHD4-201ENST00000357008 METTL22Q9BUU2 404 aaPredicted RBP16.54■□□□□ 0.24
CHD4-201ENST00000357008 WHAMMP3Q1A5X7 153 aa16.54■□□□□ 0.24
CHD4-201ENST00000357008 AKNAD1Q5T1N1 836 aa16.54■□□□□ 0.24
CHD4-201ENST00000357008 DPH6Q7L8W6 267 aa16.54■□□□□ 0.24
CHD4-201ENST00000357008 PPFIA4O75335 1185 aa16.54■□□□□ 0.24
CHD4-201ENST00000357008 ZMYM3Q14202 1370 aa16.54■□□□□ 0.24
CHD4-201ENST00000357008 TPTE2Q6XPS3 522 aa16.54■□□□□ 0.24
CHD4-201ENST00000357008 TRIM35Q9UPQ4 493 aa16.54■□□□□ 0.24
CHD4-201ENST00000357008 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.54■□□□□ 0.242e-6■■■■□ 22.6
CHD4-201ENST00000357008 B4DLN1 442 aa16.54■□□□□ 0.24
CHD4-201ENST00000357008 ADALQ6DHV7 355 aa16.54■□□□□ 0.24
CHD4-201ENST00000357008 PNMA8AQ86V59 439 aaPredicted RBP16.54■□□□□ 0.24
CHD4-201ENST00000357008 OGFOD1Q8N543 542 aa16.54■□□□□ 0.24
CHD4-201ENST00000357008 KRT5P13647 590 aa16.53■□□□□ 0.24
CHD4-201ENST00000357008 FCHSD1Q86WN1 690 aa16.53■□□□□ 0.24
CHD4-201ENST00000357008 SYCE1Q8N0S2 351 aa16.53■□□□□ 0.24
CHD4-201ENST00000357008 TRIM31Q9BZY9 425 aa16.53■□□□□ 0.24
CHD4-201ENST00000357008 RABEP2Q9H5N1 569 aa16.53■□□□□ 0.24
CHD4-201ENST00000357008 BEND3Q5T5X7 828 aa16.53■□□□□ 0.24
CHD4-201ENST00000357008 KLHL7Q8IXQ5 586 aa16.53■□□□□ 0.24
CHD4-201ENST00000357008 PLBD2Q8NHP8 589 aa16.53■□□□□ 0.24
CHD4-201ENST00000357008 NUCKS1Q9H1E3 243 aaKnown RBP16.53■□□□□ 0.24
CHD4-201ENST00000357008 PLCB1Q9NQ66 1216 aa16.53■□□□□ 0.24
CHD4-201ENST00000357008 KIF24Q5T7B8 1368 aa16.53■□□□□ 0.24
CHD4-201ENST00000357008 JAK2O60674 1132 aa16.53■□□□□ 0.24
CHD4-201ENST00000357008 RPS6KA1Q15418 735 aa16.53■□□□□ 0.24
CHD4-201ENST00000357008 LONRF3Q496Y0 759 aa16.53■□□□□ 0.24
CHD4-201ENST00000357008 VCX3BQ9H321 246 aa16.53■□□□□ 0.24
CHD4-201ENST00000357008 SAR1BQ9Y6B6 198 aa16.53■□□□□ 0.24
CHD4-201ENST00000357008 ITSN2Q9NZM3 1697 aa16.53■□□□□ 0.24
CHD4-201ENST00000357008 SMC1BQ8NDV3 1235 aa16.53■□□□□ 0.24
CHD4-201ENST00000357008 NELFBQ8WX92 580 aa16.53■□□□□ 0.24
CHD4-201ENST00000357008 KIAA1468Q9P260 1216 aa16.53■□□□□ 0.24
CHD4-201ENST00000357008 LAMC3Q9Y6N6 1575 aa16.53■□□□□ 0.24
CHD4-201ENST00000357008 PNMA6EA0A0J9YXQ4 647 aa16.53■□□□□ 0.24
CHD4-201ENST00000357008 STX10O60499 249 aa16.53■□□□□ 0.24
CHD4-201ENST00000357008 CCNT1O60563 726 aaKnown RBP16.53■□□□□ 0.24
CHD4-201ENST00000357008 MYCNP04198 464 aaPredicted RBP16.53■□□□□ 0.24
CHD4-201ENST00000357008 AGTPBP1Q9UPW5 1226 aa16.53■□□□□ 0.24
CHD4-201ENST00000357008 FAM184BQ9ULE4 1060 aa16.52■□□□□ 0.24
CHD4-201ENST00000357008 UHRF1BP1LA0JNW5 1464 aa16.52■□□□□ 0.24
CHD4-201ENST00000357008 FLOT1O75955 427 aa16.52■□□□□ 0.24
CHD4-201ENST00000357008 NCBP1Q09161 790 aaKnown RBP16.52■□□□□ 0.24
CHD4-201ENST00000357008 ARHGAP24Q8N264 748 aa16.52■□□□□ 0.24
CHD4-201ENST00000357008 MCUR1Q96AQ8 359 aa16.52■□□□□ 0.24
CHD4-201ENST00000357008 FNBP1Q96RU3 617 aa16.52■□□□□ 0.24
CHD4-201ENST00000357008 GLT8D2Q9H1C3 349 aa16.52■□□□□ 0.24
CHD4-201ENST00000357008 SSH2Q76I76 1423 aa16.52■□□□□ 0.24
CHD4-201ENST00000357008 LIN9Q5TKA1 542 aa16.52■□□□□ 0.24
CHD4-201ENST00000357008 XAGE2Q96GT9 111 aa16.52■□□□□ 0.24
CHD4-201ENST00000357008 HOXC9P31274 260 aa16.52■□□□□ 0.23
CHD4-201ENST00000357008 ERCC6LQ2NKX8 1250 aa16.52■□□□□ 0.23
CHD4-201ENST00000357008 ARMT1Q9H993 441 aa16.52■□□□□ 0.23
CHD4-201ENST00000357008 UHRF1BP1Q6BDS2 1440 aa16.52■□□□□ 0.23
CHD4-201ENST00000357008 TXKP42681 527 aa16.52■□□□□ 0.23
CHD4-201ENST00000357008 KLHL30Q0D2K2 578 aa16.52■□□□□ 0.23
CHD4-201ENST00000357008 BIRC3Q13489 604 aa16.52■□□□□ 0.23
CHD4-201ENST00000357008 PPP1R12CQ9BZL4 782 aa16.52■□□□□ 0.23
CHD4-201ENST00000357008 ZC3H12CQ9C0D7 883 aaKnown RBP16.52■□□□□ 0.23
CHD4-201ENST00000357008 FAM204AQ9H8W3 233 aa16.52■□□□□ 0.23
CHD4-201ENST00000357008 ZBTB21Q9ULJ3 1066 aa16.52■□□□□ 0.23
CHD4-201ENST00000357008 IL2RBP14784 551 aa16.51■□□□□ 0.23
CHD4-201ENST00000357008 PUM3Q15397 648 aaKnown RBP16.51■□□□□ 0.23
CHD4-201ENST00000357008 GKAP1Q5VSY0 366 aaPredicted RBP16.51■□□□□ 0.23
CHD4-201ENST00000357008 TTC16Q8NEE8 873 aa16.51■□□□□ 0.23
CHD4-201ENST00000357008 IL13P35225 146 aa16.51■□□□□ 0.23
CHD4-201ENST00000357008 ASIC3Q9UHC3 531 aa16.51■□□□□ 0.23
CHD4-201ENST00000357008 STK24Q9Y6E0 443 aa16.51■□□□□ 0.23
CHD4-201ENST00000357008 MAP3K19Q56UN5 1328 aa16.51■□□□□ 0.23
CHD4-201ENST00000357008 EFCAB8A8MWE9 144 aa16.51■□□□□ 0.23
CHD4-201ENST00000357008 E7EVH7 732 aa16.51■□□□□ 0.23
CHD4-201ENST00000357008 ME3Q16798 604 aa16.51■□□□□ 0.23
CHD4-201ENST00000357008 TMEM87AQ8NBN3 555 aa16.51■□□□□ 0.23
CHD4-201ENST00000357008 IFIH1Q9BYX4 1025 aaKnown RBP16.51■□□□□ 0.23
CHD4-201ENST00000357008 CTTNBP2NLQ9P2B4 639 aa16.51■□□□□ 0.23
CHD4-201ENST00000357008 LRWD1Q9UFC0 647 aa16.51■□□□□ 0.23
CHD4-201ENST00000357008 TCOF1Q13428 1488 aaKnown RBP16.51■□□□□ 0.23
CHD4-201ENST00000357008 CCDC62Q6P9F0 684 aa16.51■□□□□ 0.23
CHD4-201ENST00000357008 KRT25Q7Z3Z0 450 aa16.51■□□□□ 0.23
CHD4-201ENST00000357008 TRMT44Q8IYL2 757 aaKnown RBP16.51■□□□□ 0.23
CHD4-201ENST00000357008 MRFAP1L1Q96HT8 127 aa16.51■□□□□ 0.23
CHD4-201ENST00000357008 PSMB7Q99436 277 aa16.51■□□□□ 0.23
CHD4-201ENST00000357008 HSPA1LP34931 641 aa16.5■□□□□ 0.23
CHD4-201ENST00000357008 ZNF131P52739 623 aa16.5■□□□□ 0.23
CHD4-201ENST00000357008 ETF1P62495 437 aaKnown RBP16.5■□□□□ 0.23
CHD4-201ENST00000357008 MRPS9P82933 396 aaKnown RBP16.5■□□□□ 0.23
CHD4-201ENST00000357008 SFMBT2Q5VUG0 894 aa16.5■□□□□ 0.23
CHD4-201ENST00000357008 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.5■□□□□ 0.232e-7■■■■□ 19.3
CHD4-201ENST00000357008 ARHGEF2Q92974 986 aaKnown RBP16.5■□□□□ 0.23
CHD4-201ENST00000357008 PHKBQ93100 1093 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms