RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.18□□□□□ -1.42
PTPRD-202ENST00000356435 SYT1P21579 422 aa6.18□□□□□ -1.42
PTPRD-202ENST00000356435 PTGS1P23219 599 aa6.18□□□□□ -1.42
PTPRD-202ENST00000356435 HIBADHP31937 336 aaKnown RBP6.18□□□□□ -1.42
PTPRD-202ENST00000356435 NLRX1Q86UT6 975 aa6.18□□□□□ -1.42
PTPRD-202ENST00000356435 PPANQ9NQ55 473 aaKnown RBP6.18□□□□□ -1.42
PTPRD-202ENST00000356435 STIM2Q9P246 746 aa6.18□□□□□ -1.42
PTPRD-202ENST00000356435 PNMA2Q9UL42 364 aa6.18□□□□□ -1.42
PTPRD-202ENST00000356435 SOS1Q07889 1333 aaPredicted RBP6.17□□□□□ -1.42
PTPRD-202ENST00000356435 MBD4O95243 580 aa6.17□□□□□ -1.42
PTPRD-202ENST00000356435 IVLP07476 585 aa6.17□□□□□ -1.42
PTPRD-202ENST00000356435 VPS52Q8N1B4 723 aa6.17□□□□□ -1.42
PTPRD-202ENST00000356435 HELLSQ9NRZ9 838 aa6.17□□□□□ -1.42
PTPRD-202ENST00000356435 GINS2Q9Y248 185 aa6.17□□□□□ -1.42
PTPRD-202ENST00000356435 PRPF6O94906 941 aaKnown RBP6.17□□□□□ -1.42
PTPRD-202ENST00000356435 UAP1Q16222 522 aaPredicted RBP6.17□□□□□ -1.42
PTPRD-202ENST00000356435 DPY19L2Q6NUT2 758 aa6.17□□□□□ -1.42
PTPRD-202ENST00000356435 LINS1Q8NG48 757 aa6.17□□□□□ -1.42
PTPRD-202ENST00000356435 LRRC2Q9BYS8 371 aa6.17□□□□□ -1.42
PTPRD-202ENST00000356435 MAST1Q9Y2H9 1570 aa6.17□□□□□ -1.42
PTPRD-202ENST00000356435 OATP04181 439 aa6.17□□□□□ -1.42
PTPRD-202ENST00000356435 ALDH1B1P30837 517 aa6.17□□□□□ -1.42
PTPRD-202ENST00000356435 TFCP2Q12800 502 aa6.17□□□□□ -1.42
PTPRD-202ENST00000356435 CNGA4Q8IV77 575 aa6.17□□□□□ -1.42
PTPRD-202ENST00000356435 NEURL4Q96JN8 1562 aa6.17□□□□□ -1.42
PTPRD-202ENST00000356435 ANXA1P04083 346 aa6.17□□□□□ -1.42
PTPRD-202ENST00000356435 SATB1Q01826 763 aa6.17□□□□□ -1.42
PTPRD-202ENST00000356435 TRIM14Q14142 442 aa6.17□□□□□ -1.42
PTPRD-202ENST00000356435 ANO6Q4KMQ2 910 aa6.17□□□□□ -1.42
PTPRD-202ENST00000356435 WDR66Q8TBY9 1149 aa6.17□□□□□ -1.42
PTPRD-202ENST00000356435 BTG4Q9NY30 223 aa6.17□□□□□ -1.42
PTPRD-202ENST00000356435 PRIM1P49642 420 aaKnown RBP6.17□□□□□ -1.42
PTPRD-202ENST00000356435 CCDC25Q86WR0 208 aa6.17□□□□□ -1.42
PTPRD-202ENST00000356435 AOPEPQ8N6M6 819 aa6.17□□□□□ -1.42
PTPRD-202ENST00000356435 GTF3C6Q969F1 213 aa6.17□□□□□ -1.42
PTPRD-202ENST00000356435 RBSNQ9H1K0 784 aa6.17□□□□□ -1.42
PTPRD-202ENST00000356435 ZSWIM4Q9H7M6 989 aa6.17□□□□□ -1.42
PTPRD-202ENST00000356435 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.17□□□□□ -1.42
PTPRD-202ENST00000356435 CTNND2Q9UQB3 1225 aa6.17□□□□□ -1.42
PTPRD-202ENST00000356435 JAG2Q9Y219 1238 aa6.17□□□□□ -1.42
PTPRD-202ENST00000356435 ARHGEF10O15013 1369 aa6.17□□□□□ -1.42
PTPRD-202ENST00000356435 GOLGA8CPA6NN73 597 aa6.17□□□□□ -1.42
PTPRD-202ENST00000356435 HSPA1LP34931 641 aa6.17□□□□□ -1.42
PTPRD-202ENST00000356435 CCDC26Q8TAB7 109 aa6.17□□□□□ -1.42
PTPRD-202ENST00000356435 IPO4Q8TEX9 1081 aaKnown RBP6.17□□□□□ -1.42
PTPRD-202ENST00000356435 CCNT1O60563 726 aaKnown RBP6.17□□□□□ -1.42
PTPRD-202ENST00000356435 TNFAIP3P21580 790 aa6.17□□□□□ -1.42
PTPRD-202ENST00000356435 DCAF15Q66K64 600 aa6.17□□□□□ -1.42
PTPRD-202ENST00000356435 SND1Q7KZF4 910 aaKnown RBP eCLIP6.17□□□□□ -1.42
PTPRD-202ENST00000356435 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.17□□□□□ -1.42
PTPRD-202ENST00000356435 RSPH3Q86UC2 560 aa6.17□□□□□ -1.42
PTPRD-202ENST00000356435 EPSTI1Q96J88 318 aa6.17□□□□□ -1.42
PTPRD-202ENST00000356435 KCNK9Q9NPC2 374 aa6.17□□□□□ -1.42
PTPRD-202ENST00000356435 RNF216Q9NWF9 866 aaPredicted RBP6.17□□□□□ -1.42
PTPRD-202ENST00000356435 TACC3Q9Y6A5 838 aa6.17□□□□□ -1.42
PTPRD-202ENST00000356435 ATP8B2P98198 1209 aa6.16□□□□□ -1.42
PTPRD-202ENST00000356435 LETM2Q2VYF4 491 aa6.16□□□□□ -1.42
PTPRD-202ENST00000356435 KRT222Q8N1A0 295 aa6.16□□□□□ -1.42
PTPRD-202ENST00000356435 CAPZA3Q96KX2 299 aa6.16□□□□□ -1.42
PTPRD-202ENST00000356435 FAM193BQ96PV7 902 aaPredicted RBP6.16□□□□□ -1.42
PTPRD-202ENST00000356435 SPTLC3Q9NUV7 552 aa6.16□□□□□ -1.42
PTPRD-202ENST00000356435 BRD1O95696 1058 aa6.16□□□□□ -1.42
PTPRD-202ENST00000356435 ZNF569Q5MCW4 686 aa6.16□□□□□ -1.42
PTPRD-202ENST00000356435 FCHSD1Q86WN1 690 aa6.16□□□□□ -1.42
PTPRD-202ENST00000356435 FLAD1Q8NFF5 587 aa6.16□□□□□ -1.42
PTPRD-202ENST00000356435 LUC7L2Q9Y383 392 aaKnown RBP6.16□□□□□ -1.42
PTPRD-202ENST00000356435 AFG3L2Q9Y4W6 797 aa6.16□□□□□ -1.42
PTPRD-202ENST00000356435 UNC13BO14795 1591 aa6.16□□□□□ -1.42
PTPRD-202ENST00000356435 SH3TC1Q8TE82 1336 aa6.16□□□□□ -1.42
PTPRD-202ENST00000356435 NPATQ14207 1427 aa6.16□□□□□ -1.42
PTPRD-202ENST00000356435 TRAF5O00463 557 aa6.16□□□□□ -1.42
PTPRD-202ENST00000356435 F13A1P00488 732 aa6.16□□□□□ -1.42
PTPRD-202ENST00000356435 SLC1A4P43007 532 aa6.16□□□□□ -1.42
PTPRD-202ENST00000356435 ELMSAN1Q6PJG2 1045 aa6.16□□□□□ -1.42
PTPRD-202ENST00000356435 KRT25Q7Z3Z0 450 aa6.16□□□□□ -1.42
PTPRD-202ENST00000356435 TBC1D22AQ8WUA7 517 aa6.16□□□□□ -1.42
PTPRD-202ENST00000356435 DCTPP1Q9H773 170 aa6.16□□□□□ -1.42
PTPRD-202ENST00000356435 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.16□□□□□ -1.42
PTPRD-202ENST00000356435 SMIM23A6NLE4 172 aa6.16□□□□□ -1.42
PTPRD-202ENST00000356435 PFDN6O15212 129 aa6.16□□□□□ -1.42
PTPRD-202ENST00000356435 DEXIO95424 95 aa6.16□□□□□ -1.42
PTPRD-202ENST00000356435 KRT19P08727 400 aa6.16□□□□□ -1.42
PTPRD-202ENST00000356435 SKILP12757 684 aa6.16□□□□□ -1.42
PTPRD-202ENST00000356435 NCAPH2Q6IBW4 605 aa6.16□□□□□ -1.42
PTPRD-202ENST00000356435 STMN2Q93045 179 aa6.16□□□□□ -1.42
PTPRD-202ENST00000356435 NBPF3Q9H094 633 aa6.16□□□□□ -1.42
PTPRD-202ENST00000356435 CNPY2Q9Y2B0 182 aa6.16□□□□□ -1.42
PTPRD-202ENST00000356435 I3L4J1 428 aa6.16□□□□□ -1.42
PTPRD-202ENST00000356435 SARNPP82979 210 aaKnown RBP6.16□□□□□ -1.42
PTPRD-202ENST00000356435 GNPTABQ3T906 1256 aa6.16□□□□□ -1.42
PTPRD-202ENST00000356435 NSMFQ6X4W1 530 aa6.16□□□□□ -1.42
PTPRD-202ENST00000356435 ZKSCAN3Q9BRR0 538 aa6.16□□□□□ -1.42
PTPRD-202ENST00000356435 RTEL1Q9NZ71 1219 aa6.16□□□□□ -1.42
PTPRD-202ENST00000356435 GUCA1BQ9UMX6 200 aa6.16□□□□□ -1.42
PTPRD-202ENST00000356435 ELP1O95163 1332 aa6.16□□□□□ -1.42
PTPRD-202ENST00000356435 H7C1D1 291 aa6.16□□□□□ -1.42
PTPRD-202ENST00000356435 PRKG1Q13976 671 aa6.16□□□□□ -1.42
PTPRD-202ENST00000356435 MUM1L1Q5H9M0 696 aa6.16□□□□□ -1.42
PTPRD-202ENST00000356435 DCPSQ96C86 337 aaKnown RBP6.16□□□□□ -1.42
PTPRD-202ENST00000356435 ESYT1Q9BSJ8 1104 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms