RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 ZNF830Q96NB3 372 aaPredicted RBP16.2■□□□□ 0.18
LSS-201ENST00000356396 DNAH12Q6ZR08 3092 aa16.2■□□□□ 0.18
LSS-201ENST00000356396 BIN1O00499 593 aa16.2■□□□□ 0.18
LSS-201ENST00000356396 SLC15A2Q16348 729 aa16.2■□□□□ 0.18
LSS-201ENST00000356396 EARS2Q5JPH6 523 aaKnown RBP16.2■□□□□ 0.18
LSS-201ENST00000356396 ZNF804AQ7Z570 1209 aa16.2■□□□□ 0.18
LSS-201ENST00000356396 TDRD7Q8NHU6 1098 aaKnown RBP16.2■□□□□ 0.18
LSS-201ENST00000356396 GPKOWQ92917 476 aaPredicted RBP eCLIP16.2■□□□□ 0.18
LSS-201ENST00000356396 DDX4Q9NQI0 724 aaKnown RBP16.2■□□□□ 0.18
LSS-201ENST00000356396 V9GY48 417 aaPredicted RBP16.2■□□□□ 0.18
LSS-201ENST00000356396 MYH7P12883 1935 aa16.19■□□□□ 0.18
LSS-201ENST00000356396 BCORQ6W2J9 1755 aa16.19■□□□□ 0.18
LSS-201ENST00000356396 SHTN1A0MZ66 631 aa16.19■□□□□ 0.18
LSS-201ENST00000356396 HOMER1Q86YM7 354 aa16.19■□□□□ 0.18
LSS-201ENST00000356396 ZNF654Q8IZM8 581 aa16.19■□□□□ 0.18
LSS-201ENST00000356396 CHD4Q14839 1912 aa16.19■□□□□ 0.18
LSS-201ENST00000356396 IARSP41252 1262 aaKnown RBP16.19■□□□□ 0.18
LSS-201ENST00000356396 KRT40Q6A162 431 aa16.19■□□□□ 0.18
LSS-201ENST00000356396 TEX11Q8IYF3 940 aa16.19■□□□□ 0.18
LSS-201ENST00000356396 AGXT2Q9BYV1 514 aa16.19■□□□□ 0.18
LSS-201ENST00000356396 MKNK2Q9HBH9 465 aa16.19■□□□□ 0.18
LSS-201ENST00000356396 IRS2Q9Y4H2 1338 aa16.19■□□□□ 0.18
LSS-201ENST00000356396 RTL9Q8NET4 1388 aa16.19■□□□□ 0.18
LSS-201ENST00000356396 IFIT1BQ5T764 474 aaKnown RBP16.18■□□□□ 0.18
LSS-201ENST00000356396 CLEC17AQ6ZS10 378 aa16.18■□□□□ 0.18
LSS-201ENST00000356396 NLGN1Q8N2Q7 840 aa16.18■□□□□ 0.18
LSS-201ENST00000356396 RFX7Q2KHR2 1363 aa16.18■□□□□ 0.18
LSS-201ENST00000356396 UBR3Q6ZT12 1888 aa16.18■□□□□ 0.18
LSS-201ENST00000356396 CDAN1Q8IWY9 1227 aa16.18■□□□□ 0.18
LSS-201ENST00000356396 ZNF277Q9NRM2 450 aaPredicted RBP16.18■□□□□ 0.18
LSS-201ENST00000356396 ERICH2A1L162 156 aa16.17■□□□□ 0.18
LSS-201ENST00000356396 HSP90AA4PQ58FG1 418 aa16.17■□□□□ 0.18
LSS-201ENST00000356396 ZNF274Q96GC6 653 aaPredicted RBP16.17■□□□□ 0.18
LSS-201ENST00000356396 CRNKL1Q9BZJ0 848 aaKnown RBP16.17■□□□□ 0.18
LSS-201ENST00000356396 SKOR2Q2VWA4 1001 aaPredicted RBP16.17■□□□□ 0.18
LSS-201ENST00000356396 USP25Q9UHP3 1055 aa16.17■□□□□ 0.18
LSS-201ENST00000356396 NTRK3Q16288 839 aa16.17■□□□□ 0.18
LSS-201ENST00000356396 RTN1Q16799 776 aa16.17■□□□□ 0.18
LSS-201ENST00000356396 CCDC84Q86UT8 332 aaPredicted RBP16.17■□□□□ 0.18
LSS-201ENST00000356396 PDILTQ8N807 584 aa16.17■□□□□ 0.18
LSS-201ENST00000356396 IL17RBQ9NRM6 502 aa16.17■□□□□ 0.18
LSS-201ENST00000356396 SCN7AQ01118 1682 aa16.16■□□□□ 0.18
LSS-201ENST00000356396 LRP5O75197 1615 aa16.16■□□□□ 0.18
LSS-201ENST00000356396 CLRN2A0PK11 232 aa16.16■□□□□ 0.18
LSS-201ENST00000356396 ADRA2BP18089 450 aa16.16■□□□□ 0.18
LSS-201ENST00000356396 UBA5Q9GZZ9 404 aa16.16■□□□□ 0.18
LSS-201ENST00000356396 LY75O60449 1722 aa16.16■□□□□ 0.18
LSS-201ENST00000356396 SALL1Q9NSC2 1324 aa16.16■□□□□ 0.18
LSS-201ENST00000356396 RBM26Q5T8P6 1007 aaKnown RBP16.16■□□□□ 0.18
LSS-201ENST00000356396 ZSCAN29Q8IWY8 852 aaPredicted RBP16.16■□□□□ 0.18
LSS-201ENST00000356396 LRRC47Q8N1G4 583 aaKnown RBP16.16■□□□□ 0.18
LSS-201ENST00000356396 ZSCAN10Q96SZ4 725 aaPredicted RBP16.16■□□□□ 0.18
LSS-201ENST00000356396 FZD1Q9UP38 647 aa16.16■□□□□ 0.18
LSS-201ENST00000356396 CACNA1SQ13698 1873 aa16.15■□□□□ 0.18
LSS-201ENST00000356396 FRMPD2Q68DX3 1309 aaPredicted RBP16.15■□□□□ 0.18
LSS-201ENST00000356396 PLSCR1O15162 318 aa16.15■□□□□ 0.18
LSS-201ENST00000356396 CDC25AP30304 524 aa16.15■□□□□ 0.18
LSS-201ENST00000356396 SNAP25P60880 206 aa16.15■□□□□ 0.18
LSS-201ENST00000356396 SF3A1Q15459 793 aaKnown RBP16.15■□□□□ 0.18
LSS-201ENST00000356396 BRIP1Q9BX63 1249 aa16.15■□□□□ 0.18
LSS-201ENST00000356396 RTFDC1Q9BY42 306 aaPredicted RBP16.15■□□□□ 0.18
LSS-201ENST00000356396 PDCP20941 246 aa16.15■□□□□ 0.18
LSS-201ENST00000356396 UBE2HP62256 183 aa16.15■□□□□ 0.18
LSS-201ENST00000356396 FANCBQ8NB91 859 aa16.15■□□□□ 0.18
LSS-201ENST00000356396 FBXO18Q8NFZ0 1043 aa16.15■□□□□ 0.18
LSS-201ENST00000356396 STAG1Q8WVM7 1258 aa16.15■□□□□ 0.18
LSS-201ENST00000356396 ESR2Q92731 530 aa16.15■□□□□ 0.18
LSS-201ENST00000356396 CAMKK2Q96RR4 588 aa16.15■□□□□ 0.18
LSS-201ENST00000356396 RRAGDQ9NQL2 400 aaPredicted RBP16.15■□□□□ 0.18
LSS-201ENST00000356396 LEMD3Q9Y2U8 911 aa16.15■□□□□ 0.18
LSS-201ENST00000356396 DAGLAQ9Y4D2 1042 aa16.15■□□□□ 0.18
LSS-201ENST00000356396 MPHOSPH10O00566 681 aaKnown RBP16.14■□□□□ 0.17
LSS-201ENST00000356396 USP17L2Q6R6M4 530 aa16.14■□□□□ 0.17
LSS-201ENST00000356396 LUZP1Q86V48 1076 aa16.14■□□□□ 0.17
LSS-201ENST00000356396 CCAR1Q8IX12 1150 aaKnown RBP16.14■□□□□ 0.17
LSS-201ENST00000356396 RREB1Q92766 1687 aa16.14■□□□□ 0.17
LSS-201ENST00000356396 H0YIN7 160 aa16.14■□□□□ 0.17
LSS-201ENST00000356396 CASP1P29466 404 aa16.14■□□□□ 0.17
LSS-201ENST00000356396 R3HDM1Q15032 1099 aaKnown RBP16.14■□□□□ 0.17
LSS-201ENST00000356396 SYNE3Q6ZMZ3 975 aa16.14■□□□□ 0.17
LSS-201ENST00000356396 STAMQ92783 540 aa16.14■□□□□ 0.17
LSS-201ENST00000356396 USP49Q70CQ1 688 aa16.14■□□□□ 0.17
LSS-201ENST00000356396 ATP6V0A2Q9Y487 856 aa16.14■□□□□ 0.17
LSS-201ENST00000356396 AP5Z1O43299 807 aa16.13■□□□□ 0.17
LSS-201ENST00000356396 COBLO75128 1261 aa16.13■□□□□ 0.17
LSS-201ENST00000356396 WDHD1O75717 1129 aaPredicted RBP16.13■□□□□ 0.17
LSS-201ENST00000356396 SPC24Q8NBT2 197 aa16.13■□□□□ 0.17
LSS-201ENST00000356396 CABP5Q9NP86 173 aa16.13■□□□□ 0.17
LSS-201ENST00000356396 PCDHA7Q9UN72 937 aa16.13■□□□□ 0.17
LSS-201ENST00000356396 ZMYM6O95789 1325 aa16.13■□□□□ 0.17
LSS-201ENST00000356396 BBOX1O75936 387 aa16.13■□□□□ 0.17
LSS-201ENST00000356396 STK38Q15208 465 aa16.13■□□□□ 0.17
LSS-201ENST00000356396 ZRSR1Q15695 479 aaKnown RBP16.13■□□□□ 0.17
LSS-201ENST00000356396 LRSAM1Q6UWE0 723 aa16.13■□□□□ 0.17
LSS-201ENST00000356396 SRBD1Q8N5C6 995 aaKnown RBP16.13■□□□□ 0.17
LSS-201ENST00000356396 STK32BQ9NY57 414 aa16.13■□□□□ 0.17
LSS-201ENST00000356396 FOXN1O15353 648 aa16.12■□□□□ 0.17
LSS-201ENST00000356396 DHX16O60231 1041 aaKnown RBP16.12■□□□□ 0.17
LSS-201ENST00000356396 TSPY3P0CV98 308 aa16.12■□□□□ 0.17
LSS-201ENST00000356396 TSPY8P0CW00 308 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms