RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 GBP7Q8N8V2 638 aaPredicted RBP17.9■□□□□ 0.46
RXRA-201ENST00000356384 KLHL7Q8IXQ5 586 aa17.9■□□□□ 0.46
RXRA-201ENST00000356384 CCDC170Q8IYT3 715 aa17.9■□□□□ 0.46
RXRA-201ENST00000356384 AFAP1L2Q8N4X5 818 aa17.9■□□□□ 0.46
RXRA-201ENST00000356384 SECISBP2LQ93073 1101 aaKnown RBP17.9■□□□□ 0.46
RXRA-201ENST00000356384 CARD6Q9BX69 1037 aa17.9■□□□□ 0.46
RXRA-201ENST00000356384 B4E1Z4 1266 aa17.9■□□□□ 0.46
RXRA-201ENST00000356384 SARNPP82979 210 aaKnown RBP17.9■□□□□ 0.46
RXRA-201ENST00000356384 RILPL1Q5EBL4 403 aa17.9■□□□□ 0.46
RXRA-201ENST00000356384 MAEAQ7L5Y9 396 aa17.9■□□□□ 0.46
RXRA-201ENST00000356384 RPRD2Q5VT52 1461 aaKnown RBP17.9■□□□□ 0.46
RXRA-201ENST00000356384 EIF6P56537 245 aaKnown RBP17.89■□□□□ 0.46
RXRA-201ENST00000356384 UBE2Q2Q8WVN8 375 aa17.89■□□□□ 0.46
RXRA-201ENST00000356384 ANKRD2Q9GZV1 360 aa17.89■□□□□ 0.46
RXRA-201ENST00000356384 CTTNBP2NLQ9P2B4 639 aa17.89■□□□□ 0.46
RXRA-201ENST00000356384 KCNH3Q9ULD8 1083 aa17.89■□□□□ 0.46
RXRA-201ENST00000356384 CLNS1AP54105 237 aaKnown RBP17.89■□□□□ 0.45
RXRA-201ENST00000356384 STRN3Q13033 797 aa17.89■□□□□ 0.45
RXRA-201ENST00000356384 ATL3Q6DD88 541 aa17.89■□□□□ 0.45
RXRA-201ENST00000356384 GINS2Q9Y248 185 aa17.89■□□□□ 0.45
RXRA-201ENST00000356384 CEP104O60308 925 aa17.89■□□□□ 0.45
RXRA-201ENST00000356384 TXKP42681 527 aa17.89■□□□□ 0.45
RXRA-201ENST00000356384 SYNRGQ9UMZ2 1314 aa17.89■□□□□ 0.45
RXRA-201ENST00000356384 TCOF1Q13428 1488 aaKnown RBP17.89■□□□□ 0.45
RXRA-201ENST00000356384 BIN2Q9UBW5 565 aaPredicted RBP17.89■□□□□ 0.45
RXRA-201ENST00000356384 NFATC2IPQ8NCF5 419 aa17.89■□□□□ 0.45
RXRA-201ENST00000356384 TNNQ9UQP3 1299 aa17.89■□□□□ 0.45
RXRA-201ENST00000356384 TRAPPC8Q9Y2L5 1435 aa17.89■□□□□ 0.45
RXRA-201ENST00000356384 TXNDC9O14530 226 aa17.88■□□□□ 0.45
RXRA-201ENST00000356384 PSMB7Q99436 277 aa17.88■□□□□ 0.45
RXRA-201ENST00000356384 DCTPP1Q9H773 170 aa17.88■□□□□ 0.45
RXRA-201ENST00000356384 C14orf93Q9H972 538 aaKnown RBP17.88■□□□□ 0.45
RXRA-201ENST00000356384 PARP3Q9Y6F1 533 aa17.88■□□□□ 0.45
RXRA-201ENST00000356384 CETN3O15182 167 aa17.88■□□□□ 0.45
RXRA-201ENST00000356384 HSPA2P54652 639 aa17.88■□□□□ 0.45
RXRA-201ENST00000356384 PNMA8AQ86V59 439 aaPredicted RBP17.88■□□□□ 0.45
RXRA-201ENST00000356384 TEX11Q8IYF3 940 aa17.88■□□□□ 0.45
RXRA-201ENST00000356384 RAD50Q92878 1312 aa17.88■□□□□ 0.45
RXRA-201ENST00000356384 HAUS3Q68CZ6 603 aa17.88■□□□□ 0.45
RXRA-201ENST00000356384 ZNF526Q8TF50 670 aaPredicted RBP17.88■□□□□ 0.45
RXRA-201ENST00000356384 BICC1Q9H694 974 aaKnown RBP17.88■□□□□ 0.45
RXRA-201ENST00000356384 NOD1Q9Y239 953 aa17.88■□□□□ 0.45
RXRA-201ENST00000356384 FANCCQ00597 558 aa17.88■□□□□ 0.45
RXRA-201ENST00000356384 ANO1Q5XXA6 986 aa17.88■□□□□ 0.45
RXRA-201ENST00000356384 TAOK1Q7L7X3 1001 aa17.88■□□□□ 0.45
RXRA-201ENST00000356384 SLC9C1Q4G0N8 1177 aa17.87■□□□□ 0.45
RXRA-201ENST00000356384 GABPB2Q8TAK5 448 aaPredicted RBP17.87■□□□□ 0.45
RXRA-201ENST00000356384 EYA3Q99504 573 aa17.87■□□□□ 0.45
RXRA-201ENST00000356384 MAPKBP1O60336 1514 aa17.87■□□□□ 0.45
RXRA-201ENST00000356384 DEXIO95424 95 aa17.87■□□□□ 0.45
RXRA-201ENST00000356384 TSNAXIP1Q2TAA8 658 aa17.87■□□□□ 0.45
RXRA-201ENST00000356384 CASC4Q6P4E1 433 aa17.87■□□□□ 0.45
RXRA-201ENST00000356384 POLR2DO15514 142 aaKnown RBP17.87■□□□□ 0.45
RXRA-201ENST00000356384 PAK1Q13153 545 aa17.87■□□□□ 0.45
RXRA-201ENST00000356384 NCAPH2Q6IBW4 605 aa17.87■□□□□ 0.45
RXRA-201ENST00000356384 SH2D4AQ9H788 454 aa17.87■□□□□ 0.45
RXRA-201ENST00000356384 HELLSQ9NRZ9 838 aa17.87■□□□□ 0.45
RXRA-201ENST00000356384 RTCBQ9Y3I0 505 aaKnown RBP17.87■□□□□ 0.45
RXRA-201ENST00000356384 KDM5BQ9UGL1 1544 aa17.87■□□□□ 0.45
RXRA-201ENST00000356384 ARHGEF35A5YM69 484 aa17.87■□□□□ 0.45
RXRA-201ENST00000356384 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.87■□□□□ 0.45
RXRA-201ENST00000356384 PLEKHM2Q8IWE5 1019 aa17.87■□□□□ 0.45
RXRA-201ENST00000356384 EXOC7Q9UPT5 735 aa17.87■□□□□ 0.45
RXRA-201ENST00000356384 CUL4BQ13620 913 aa17.87■□□□□ 0.45
RXRA-201ENST00000356384 MTHFSDQ2M296 383 aaKnown RBP17.87■□□□□ 0.45
RXRA-201ENST00000356384 DCUN1D2Q6PH85 259 aa17.87■□□□□ 0.45
RXRA-201ENST00000356384 I3L4J1 428 aa17.86■□□□□ 0.45
RXRA-201ENST00000356384 DDX39AO00148 427 aaKnown RBP17.86■□□□□ 0.45
RXRA-201ENST00000356384 POTEDQ86YR6 584 aa17.86■□□□□ 0.45
RXRA-201ENST00000356384 TRIM6Q9C030 488 aaPredicted RBP17.86■□□□□ 0.45
RXRA-201ENST00000356384 V9GY48 417 aaPredicted RBP17.86■□□□□ 0.45
RXRA-201ENST00000356384 DUOX2Q9NRD8 1548 aa17.86■□□□□ 0.45
RXRA-201ENST00000356384 GOLGA6BA6NDN3 693 aa17.86■□□□□ 0.45
RXRA-201ENST00000356384 RPS6KB1P23443 525 aa17.86■□□□□ 0.45
RXRA-201ENST00000356384 POLD1P28340 1107 aa17.86■□□□□ 0.45
RXRA-201ENST00000356384 TUBB2AQ13885 445 aa17.86■□□□□ 0.45
RXRA-201ENST00000356384 RUFY4Q6ZNE9 571 aa17.86■□□□□ 0.45
RXRA-201ENST00000356384 TUBB2BQ9BVA1 445 aa17.86■□□□□ 0.45
RXRA-201ENST00000356384 USP26Q9BXU7 913 aa17.86■□□□□ 0.45
RXRA-201ENST00000356384 RALGAPBQ86X10 1494 aa17.86■□□□□ 0.45
RXRA-201ENST00000356384 KRT15P19012 456 aa17.86■□□□□ 0.45
RXRA-201ENST00000356384 MAN1A1P33908 653 aa17.86■□□□□ 0.45
RXRA-201ENST00000356384 ELF2Q15723 593 aa17.86■□□□□ 0.45
RXRA-201ENST00000356384 CABS1Q96KC9 395 aa17.85■□□□□ 0.45
RXRA-201ENST00000356384 VCXQ9H320 206 aa17.85■□□□□ 0.45
RXRA-201ENST00000356384 TBC1D7Q9P0N9 293 aa17.85■□□□□ 0.45
RXRA-201ENST00000356384 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.85■□□□□ 0.45
RXRA-201ENST00000356384 SAMD9Q5K651 1589 aa17.85■□□□□ 0.45
RXRA-201ENST00000356384 RBSNQ9H1K0 784 aa17.85■□□□□ 0.45
RXRA-201ENST00000356384 TTLL3Q9Y4R7 772 aa17.85■□□□□ 0.45
RXRA-201ENST00000356384 RIOK3O14730 519 aaKnown RBP17.85■□□□□ 0.45
RXRA-201ENST00000356384 MYCLP12524 364 aaPredicted RBP17.85■□□□□ 0.45
RXRA-201ENST00000356384 EIF4A2Q14240 407 aaKnown RBP17.85■□□□□ 0.45
RXRA-201ENST00000356384 DENND2AQ9ULE3 1009 aa17.85■□□□□ 0.45
RXRA-201ENST00000356384 GJA3Q9Y6H8 435 aa17.85■□□□□ 0.45
RXRA-201ENST00000356384 ABCC2Q92887 1545 aa17.85■□□□□ 0.45
RXRA-201ENST00000356384 ARHGAP24Q8N264 748 aa17.85■□□□□ 0.45
RXRA-201ENST00000356384 PRPF31Q8WWY3 499 aaKnown RBP17.85■□□□□ 0.45
RXRA-201ENST00000356384 ARMT1Q9H993 441 aa17.85■□□□□ 0.45
RXRA-201ENST00000356384 TAB2Q9NYJ8 693 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms