RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 ANKFY1Q9P2R3 1169 aa12.26□□□□□ -0.45
GTF3C1-201ENST00000356183 PTPRKQ15262 1439 aa12.26□□□□□ -0.45
GTF3C1-201ENST00000356183 STK10O94804 968 aaKnown RBP12.26□□□□□ -0.45
GTF3C1-201ENST00000356183 TMED1Q13445 227 aa12.26□□□□□ -0.45
GTF3C1-201ENST00000356183 BRAPQ7Z569 592 aa12.26□□□□□ -0.45
GTF3C1-201ENST00000356183 RASEFQ8IZ41 740 aa12.26□□□□□ -0.45
GTF3C1-201ENST00000356183 MAGEB6Q8N7X4 407 aa12.26□□□□□ -0.45
GTF3C1-201ENST00000356183 SPDL1Q96EA4 605 aa12.26□□□□□ -0.45
GTF3C1-201ENST00000356183 EFCC1Q9HA90 598 aa12.26□□□□□ -0.45
GTF3C1-201ENST00000356183 VCX3AQ9NNX9 186 aa12.26□□□□□ -0.45
GTF3C1-201ENST00000356183 ASXL1Q8IXJ9 1541 aa12.26□□□□□ -0.45
GTF3C1-201ENST00000356183 CALUO43852 315 aaPredicted RBP12.26□□□□□ -0.45
GTF3C1-201ENST00000356183 SERPINB6P35237 376 aa12.26□□□□□ -0.45
GTF3C1-201ENST00000356183 PPFIA1Q13136 1202 aa12.26□□□□□ -0.45
GTF3C1-201ENST00000356183 VWA3BQ502W6 1294 aa12.26□□□□□ -0.45
GTF3C1-201ENST00000356183 GAS2L3Q86XJ1 694 aa12.26□□□□□ -0.45
GTF3C1-201ENST00000356183 KCNH5Q8NCM2 988 aa12.26□□□□□ -0.45
GTF3C1-201ENST00000356183 SCAF11Q99590 1463 aaKnown RBP12.26□□□□□ -0.45
GTF3C1-201ENST00000356183 MTMR3Q13615 1198 aa12.25□□□□□ -0.45
GTF3C1-201ENST00000356183 TAF12Q16514 161 aa12.25□□□□□ -0.45
GTF3C1-201ENST00000356183 LIN9Q5TKA1 542 aa12.25□□□□□ -0.45
GTF3C1-201ENST00000356183 NAA16Q6N069 864 aaPredicted RBP12.25□□□□□ -0.45
GTF3C1-201ENST00000356183 TMEM63CQ9P1W3 806 aa12.25□□□□□ -0.45
GTF3C1-201ENST00000356183 IL1RL1Q01638 556 aa12.25□□□□□ -0.45
GTF3C1-201ENST00000356183 SLC9C2Q5TAH2 1124 aa12.25□□□□□ -0.45
GTF3C1-201ENST00000356183 PLEKHM2Q8IWE5 1019 aa12.25□□□□□ -0.45
GTF3C1-201ENST00000356183 FNBP1Q96RU3 617 aa12.25□□□□□ -0.45
GTF3C1-201ENST00000356183 DBN1Q16643 649 aa12.25□□□□□ -0.45
GTF3C1-201ENST00000356183 RASIP1Q5U651 963 aa12.25□□□□□ -0.45
GTF3C1-201ENST00000356183 IQUBQ8NA54 791 aa12.25□□□□□ -0.45
GTF3C1-201ENST00000356183 MIGA1Q8NAN2 632 aa12.25□□□□□ -0.45
GTF3C1-201ENST00000356183 CHPF2Q9P2E5 772 aa12.25□□□□□ -0.45
GTF3C1-201ENST00000356183 PPP1R9AQ9ULJ8 1098 aa12.25□□□□□ -0.45
GTF3C1-201ENST00000356183 PPME1Q9Y570 386 aa12.25□□□□□ -0.45
GTF3C1-201ENST00000356183 TROVE2P10155 538 aaKnown RBP eCLIP12.25□□□□□ -0.45
GTF3C1-201ENST00000356183 CPA1P15085 419 aa12.25□□□□□ -0.45
GTF3C1-201ENST00000356183 GNAQP50148 359 aa12.25□□□□□ -0.45
GTF3C1-201ENST00000356183 KRT71Q3SY84 523 aa12.25□□□□□ -0.45
GTF3C1-201ENST00000356183 THOC2Q8NI27 1593 aaKnown RBP12.25□□□□□ -0.45
GTF3C1-201ENST00000356183 SLF1Q9BQI6 1058 aa12.25□□□□□ -0.45
GTF3C1-201ENST00000356183 DCTPP1Q9H773 170 aa12.25□□□□□ -0.45
GTF3C1-201ENST00000356183 PA2G4Q9UQ80 394 aaKnown RBP12.25□□□□□ -0.45
GTF3C1-201ENST00000356183 GOLGA8KD6RF30 607 aa12.25□□□□□ -0.45
GTF3C1-201ENST00000356183 POLR2DO15514 142 aaKnown RBP12.25□□□□□ -0.45
GTF3C1-201ENST00000356183 CALML3P27482 149 aa12.25□□□□□ -0.45
GTF3C1-201ENST00000356183 RAD51AP2Q09MP3 1159 aa12.25□□□□□ -0.45
GTF3C1-201ENST00000356183 RGS16O15492 202 aaPredicted RBP12.25□□□□□ -0.45
GTF3C1-201ENST00000356183 CHMP2AO43633 222 aa12.25□□□□□ -0.45
GTF3C1-201ENST00000356183 ZNF622Q969S3 477 aaKnown RBP eCLIP12.25□□□□□ -0.451e-6■■■□□ 15.2
GTF3C1-201ENST00000356183 TBC1D7Q9P0N9 293 aa12.25□□□□□ -0.45
GTF3C1-201ENST00000356183 HIP1RO75146 1068 aa12.24□□□□□ -0.45
GTF3C1-201ENST00000356183 RPL13P26373 211 aaKnown RBP12.24□□□□□ -0.45
GTF3C1-201ENST00000356183 CTNNA1P35221 906 aaKnown RBP12.24□□□□□ -0.45
GTF3C1-201ENST00000356183 CAPS2Q9BXY5 557 aa12.24□□□□□ -0.45
GTF3C1-201ENST00000356183 TAB2Q9NYJ8 693 aa12.24□□□□□ -0.45
GTF3C1-201ENST00000356183 LONRF2Q1L5Z9 754 aa12.24□□□□□ -0.45
GTF3C1-201ENST00000356183 LETM2Q2VYF4 491 aa12.24□□□□□ -0.45
GTF3C1-201ENST00000356183 MAEAQ7L5Y9 396 aa12.24□□□□□ -0.45
GTF3C1-201ENST00000356183 MRFAP1L1Q96HT8 127 aa12.24□□□□□ -0.45
GTF3C1-201ENST00000356183 LRRD1A4D1F6 860 aa12.24□□□□□ -0.45
GTF3C1-201ENST00000356183 RNF40O75150 1001 aa12.24□□□□□ -0.45
GTF3C1-201ENST00000356183 IRX4P78413 519 aa12.24□□□□□ -0.45
GTF3C1-201ENST00000356183 CFAP221Q4G0U5 840 aa12.24□□□□□ -0.45
GTF3C1-201ENST00000356183 THEMISQ8N1K5 641 aaPredicted RBP12.24□□□□□ -0.45
GTF3C1-201ENST00000356183 HDAC9Q9UKV0 1011 aa12.24□□□□□ -0.45
GTF3C1-201ENST00000356183 NLRP12P59046 1061 aa12.24□□□□□ -0.45
GTF3C1-201ENST00000356183 RILPL1Q5EBL4 403 aa12.24□□□□□ -0.45
GTF3C1-201ENST00000356183 CCDC89Q8N998 374 aa12.24□□□□□ -0.45
GTF3C1-201ENST00000356183 LUC7L3O95232 432 aaKnown RBP12.24□□□□□ -0.45
GTF3C1-201ENST00000356183 PHLDB3Q6NSJ2 640 aa12.24□□□□□ -0.45
GTF3C1-201ENST00000356183 TTLL3Q9Y4R7 772 aa12.24□□□□□ -0.45
GTF3C1-201ENST00000356183 PLB1Q6P1J6 1458 aa12.24□□□□□ -0.45
GTF3C1-201ENST00000356183 WDR46O15213 610 aaKnown RBP12.23□□□□□ -0.45
GTF3C1-201ENST00000356183 SLC8A1P32418 973 aa12.23□□□□□ -0.45
GTF3C1-201ENST00000356183 PAK1Q13153 545 aa12.23□□□□□ -0.45
GTF3C1-201ENST00000356183 SRGAP1Q7Z6B7 1085 aa12.23□□□□□ -0.45
GTF3C1-201ENST00000356183 UIMC1Q96RL1 719 aa12.23□□□□□ -0.45
GTF3C1-201ENST00000356183 Q9H521 79 aa12.23□□□□□ -0.45
GTF3C1-201ENST00000356183 BICRAQ9NZM4 1560 aa12.23□□□□□ -0.45
GTF3C1-201ENST00000356183 CNNM4Q6P4Q7 775 aa12.23□□□□□ -0.45
GTF3C1-201ENST00000356183 PPP4R1Q8TF05 950 aa12.23□□□□□ -0.45
GTF3C1-201ENST00000356183 ANLNQ9NQW6 1124 aa12.23□□□□□ -0.45
GTF3C1-201ENST00000356183 CTTNBP2NLQ9P2B4 639 aa12.23□□□□□ -0.45
GTF3C1-201ENST00000356183 IMPACTQ9P2X3 320 aa12.23□□□□□ -0.45
GTF3C1-201ENST00000356183 CCDC169A6NNP5 214 aa12.23□□□□□ -0.45
GTF3C1-201ENST00000356183 CCDC152Q4G0S7 254 aa12.23□□□□□ -0.45
GTF3C1-201ENST00000356183 MRPL50Q8N5N7 158 aaKnown RBP12.23□□□□□ -0.45
GTF3C1-201ENST00000356183 MAGI1Q96QZ7 1491 aaPredicted RBP12.23□□□□□ -0.45
GTF3C1-201ENST00000356183 ATICP31939 592 aa12.23□□□□□ -0.45
GTF3C1-201ENST00000356183 PTPROQ16827 1216 aa12.23□□□□□ -0.45
GTF3C1-201ENST00000356183 TYW1BQ6NUM6 668 aa12.23□□□□□ -0.45
GTF3C1-201ENST00000356183 CAPN12Q6ZSI9 719 aa12.23□□□□□ -0.45
GTF3C1-201ENST00000356183 HINFPQ9BQA5 517 aa12.23□□□□□ -0.45
GTF3C1-201ENST00000356183 ZMYM4Q5VZL5 1548 aa12.23□□□□□ -0.45
GTF3C1-201ENST00000356183 APOEP02649 317 aa12.23□□□□□ -0.45
GTF3C1-201ENST00000356183 ZBTB17Q13105 803 aa12.23□□□□□ -0.45
GTF3C1-201ENST00000356183 CSGALNACT2Q8N6G5 542 aa12.23□□□□□ -0.45
GTF3C1-201ENST00000356183 CACYBPQ9HB71 228 aaKnown RBP12.23□□□□□ -0.45
GTF3C1-201ENST00000356183 FAN1Q9Y2M0 1017 aa12.23□□□□□ -0.45
GTF3C1-201ENST00000356183 GADD45BO75293 160 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms