RNA–Protein interactions for RNA: ENST00000356135.9

CHKA-202, Transcript of choline kinase alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHKA, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-202ENST00000356135 BLOC1S2Q6QNY1 142 aa28.47■■■□□ 2.15
CHKA-202ENST00000356135 TTC6Q86TZ1 520 aa28.47■■■□□ 2.15
CHKA-202ENST00000356135 FAM151AQ8WW52 585 aa28.47■■■□□ 2.15
CHKA-202ENST00000356135 SNX21Q969T3 373 aa28.47■■■□□ 2.15
CHKA-202ENST00000356135 EPHX2P34913 555 aa28.47■■■□□ 2.15
CHKA-202ENST00000356135 FKBP1CQ5VVH2 108 aa28.47■■■□□ 2.15
CHKA-202ENST00000356135 RUFY3Q7L099 469 aa28.47■■■□□ 2.15
CHKA-202ENST00000356135 NCOA7Q8NI08 942 aa28.47■■■□□ 2.15
CHKA-202ENST00000356135 LAMB1P07942 1786 aa28.47■■■□□ 2.15
CHKA-202ENST00000356135 CD2BP2O95400 341 aaKnown RBP28.46■■■□□ 2.15
CHKA-202ENST00000356135 GGA3Q9NZ52 723 aa28.46■■■□□ 2.15
CHKA-202ENST00000356135 SLC4A3P48751 1232 aa28.45■■■□□ 2.15
CHKA-202ENST00000356135 RASA3Q14644 834 aa28.45■■■□□ 2.15
CHKA-202ENST00000356135 CYP46A1Q9Y6A2 500 aa28.45■■■□□ 2.15
CHKA-202ENST00000356135 SLC3A2P08195 630 aaKnown RBP28.45■■■□□ 2.14
CHKA-202ENST00000356135 RPS6KB1P23443 525 aa28.45■■■□□ 2.14
CHKA-202ENST00000356135 TRDNQ13061 729 aa28.45■■■□□ 2.14
CHKA-202ENST00000356135 RALYLQ86SE5 291 aaKnown RBP28.45■■■□□ 2.14
CHKA-202ENST00000356135 FAM83AQ86UY5 434 aa28.45■■■□□ 2.14
CHKA-202ENST00000356135 MB21D2Q8IYB1 491 aaPredicted RBP28.45■■■□□ 2.14
CHKA-202ENST00000356135 LRRC2Q9BYS8 371 aa28.45■■■□□ 2.14
CHKA-202ENST00000356135 DHX36Q9H2U1 1008 aaKnown RBP28.45■■■□□ 2.14
CHKA-202ENST00000356135 RNF41Q9H4P4 317 aaPredicted RBP28.45■■■□□ 2.14
CHKA-202ENST00000356135 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.45■■■□□ 2.14
CHKA-202ENST00000356135 FAM196BA6NMK8 535 aa28.44■■■□□ 2.14
CHKA-202ENST00000356135 HLA-DOAP06340 250 aa28.44■■■□□ 2.14
CHKA-202ENST00000356135 FGRP09769 529 aa28.44■■■□□ 2.14
CHKA-202ENST00000356135 CYB5R4Q7L1T6 521 aa28.44■■■□□ 2.14
CHKA-202ENST00000356135 TAF1DQ9H5J8 278 aaPredicted RBP28.44■■■□□ 2.14
CHKA-202ENST00000356135 KDM4AO75164 1064 aa28.43■■■□□ 2.14
CHKA-202ENST00000356135 C16orf86Q6ZW13 317 aa28.43■■■□□ 2.14
CHKA-202ENST00000356135 ZSWIM5Q9P217 1185 aa28.43■■■□□ 2.14
CHKA-202ENST00000356135 PI4KBQ9UBF8 816 aa28.43■■■□□ 2.14
CHKA-202ENST00000356135 PGAP2Q9UHJ9 254 aa28.43■■■□□ 2.14
CHKA-202ENST00000356135 ROBO3Q96MS0 1386 aa28.43■■■□□ 2.14
CHKA-202ENST00000356135 TNNI2P48788 182 aa28.42■■■□□ 2.14
CHKA-202ENST00000356135 CDK8P49336 464 aa28.42■■■□□ 2.14
CHKA-202ENST00000356135 GABPAQ06546 454 aa28.42■■■□□ 2.14
CHKA-202ENST00000356135 PDE4BQ07343 736 aa28.42■■■□□ 2.14
CHKA-202ENST00000356135 DHX32Q7L7V1 743 aaKnown RBP28.42■■■□□ 2.14
CHKA-202ENST00000356135 CSRNP1Q96S65 589 aa28.42■■■□□ 2.14
CHKA-202ENST00000356135 LARP6Q9BRS8 491 aaKnown RBP28.42■■■□□ 2.14
CHKA-202ENST00000356135 DEFB129Q9H1M3 183 aa28.42■■■□□ 2.14
CHKA-202ENST00000356135 PDRG1Q9NUG6 133 aa28.42■■■□□ 2.14
CHKA-202ENST00000356135 SERPINB13Q9UIV8 391 aa28.42■■■□□ 2.14
CHKA-202ENST00000356135 ATRNL1Q5VV63 1379 aa28.42■■■□□ 2.14
CHKA-202ENST00000356135 ANTXR2P58335 489 aa28.42■■■□□ 2.14
CHKA-202ENST00000356135 EXOSC10Q01780 885 aaKnown RBP28.42■■■□□ 2.14
CHKA-202ENST00000356135 TTC14Q96N46 770 aa28.42■■■□□ 2.14
CHKA-202ENST00000356135 KRT23Q9C075 422 aa28.42■■■□□ 2.14
CHKA-202ENST00000356135 CNNM2Q9H8M5 875 aa28.42■■■□□ 2.14
CHKA-202ENST00000356135 RRAGCQ9HB90 399 aa28.42■■■□□ 2.14
CHKA-202ENST00000356135 MKNK2Q9HBH9 465 aa28.42■■■□□ 2.14
CHKA-202ENST00000356135 IQCA1LA6NCM1 817 aa28.41■■■□□ 2.14
CHKA-202ENST00000356135 FAM47AQ5JRC9 791 aa28.41■■■□□ 2.14
CHKA-202ENST00000356135 PRAMEF18Q5VWM3 479 aa28.41■■■□□ 2.14
CHKA-202ENST00000356135 USP50Q70EL3 339 aaPredicted RBP28.41■■■□□ 2.14
CHKA-202ENST00000356135 ZNF526Q8TF50 670 aaPredicted RBP28.41■■■□□ 2.14
CHKA-202ENST00000356135 RANBP6O60518 1105 aaKnown RBP28.4■■■□□ 2.14
CHKA-202ENST00000356135 HMGB1P09429 215 aaKnown RBP28.4■■■□□ 2.14
CHKA-202ENST00000356135 TNFAIP1Q13829 316 aa28.4■■■□□ 2.14
CHKA-202ENST00000356135 EAPPQ56P03 285 aaPredicted RBP28.4■■■□□ 2.14
CHKA-202ENST00000356135 HSCBQ8IWL3 235 aa28.4■■■□□ 2.14
CHKA-202ENST00000356135 DNAJC18Q9H819 358 aa28.4■■■□□ 2.14
CHKA-202ENST00000356135 WDR90Q96KV7 1748 aa28.4■■■□□ 2.14
CHKA-202ENST00000356135 DLK2Q6UY11 383 aa28.39■■■□□ 2.14
CHKA-202ENST00000356135 NOL8Q76FK4 1167 aaKnown RBP28.39■■■□□ 2.14
CHKA-202ENST00000356135 CRACR2BQ8N4Y2 399 aaPredicted RBP28.39■■■□□ 2.14
CHKA-202ENST00000356135 TEPSINQ96N21 525 aa28.39■■■□□ 2.14
CHKA-202ENST00000356135 ZKSCAN3Q9BRR0 538 aa28.39■■■□□ 2.14
CHKA-202ENST00000356135 GPHNQ9NQX3 736 aaPredicted RBP28.39■■■□□ 2.14
CHKA-202ENST00000356135 SIPA1L1O43166 1804 aa28.39■■■□□ 2.14
CHKA-202ENST00000356135 PRC1O43663 620 aa28.39■■■□□ 2.13
CHKA-202ENST00000356135 ORC4O43929 436 aa28.39■■■□□ 2.13
CHKA-202ENST00000356135 MCM5P33992 734 aa28.39■■■□□ 2.13
CHKA-202ENST00000356135 AK2P54819 239 aa28.39■■■□□ 2.13
CHKA-202ENST00000356135 APOBEC3FQ8IUX4 373 aaKnown RBP28.39■■■□□ 2.13
CHKA-202ENST00000356135 COL2A1P02458 1487 aaPredicted RBP28.38■■■□□ 2.13
CHKA-202ENST00000356135 PCP11498 1178 aaKnown RBP28.38■■■□□ 2.13
CHKA-202ENST00000356135 Q6ZUG5 572 aa28.38■■■□□ 2.13
CHKA-202ENST00000356135 FOXP4Q8IVH2 680 aaPredicted RBP28.38■■■□□ 2.13
CHKA-202ENST00000356135 ESR2Q92731 530 aa28.38■■■□□ 2.13
CHKA-202ENST00000356135 EHD4Q9H223 541 aa28.38■■■□□ 2.13
CHKA-202ENST00000356135 SCN4AP35499 1836 aa28.37■■■□□ 2.13
CHKA-202ENST00000356135 ST18O60284 1047 aa28.37■■■□□ 2.13
CHKA-202ENST00000356135 RASA1P20936 1047 aa28.37■■■□□ 2.13
CHKA-202ENST00000356135 SHMT1P34896 483 aa28.37■■■□□ 2.13
CHKA-202ENST00000356135 MIGA2Q7L4E1 593 aa28.37■■■□□ 2.13
CHKA-202ENST00000356135 POTEIP0CG38 1075 aa28.37■■■□□ 2.13
CHKA-202ENST00000356135 POTEJP0CG39 1038 aa28.37■■■□□ 2.13
CHKA-202ENST00000356135 ZNF444Q8N0Y2 327 aaPredicted RBP28.37■■■□□ 2.13
CHKA-202ENST00000356135 TFAP4Q01664 338 aa28.36■■■□□ 2.13
CHKA-202ENST00000356135 DCPSQ96C86 337 aaKnown RBP28.36■■■□□ 2.13
CHKA-202ENST00000356135 TOB2Q14106 344 aaPredicted RBP28.35■■■□□ 2.13
CHKA-202ENST00000356135 NBPF12Q5TAG4 269 aaPredicted RBP28.35■■■□□ 2.13
CHKA-202ENST00000356135 METTL16Q86W50 562 aaKnown RBP28.35■■■□□ 2.13
CHKA-202ENST00000356135 NMRK2Q9NPI5 230 aa28.35■■■□□ 2.13
CHKA-202ENST00000356135 TSPY2A6NKD2 308 aa28.34■■■□□ 2.13
CHKA-202ENST00000356135 TRIM34Q9BYJ4 488 aa28.34■■■□□ 2.13
CHKA-202ENST00000356135 ZNF287Q9HBT7 754 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms