RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 CERS5Q8N5B7 392 aa20.11■□□□□ 0.81
VPS13B-201ENST00000355155 TNKSO95271 1327 aa20.11■□□□□ 0.81
VPS13B-201ENST00000355155 CCDC196A0A1B0GTZ2 297 aa20.11■□□□□ 0.81
VPS13B-201ENST00000355155 CALM1P0DP23 149 aa20.11■□□□□ 0.81
VPS13B-201ENST00000355155 CALM2P0DP24 149 aa20.11■□□□□ 0.81
VPS13B-201ENST00000355155 CALM3P0DP25 149 aa20.11■□□□□ 0.81
VPS13B-201ENST00000355155 STRIP1Q5VSL9 837 aa20.11■□□□□ 0.81
VPS13B-201ENST00000355155 NBPF11Q86T75 865 aa20.11■□□□□ 0.81
VPS13B-201ENST00000355155 PLIN4Q96Q06 1357 aa20.1■□□□□ 0.81
VPS13B-201ENST00000355155 GOLGA8AA7E2F4 631 aa20.1■□□□□ 0.81
VPS13B-201ENST00000355155 ENAHQ8N8S7 591 aaPredicted RBP20.1■□□□□ 0.81
VPS13B-201ENST00000355155 ZNF622Q969S3 477 aaKnown RBP eCLIP20.1■□□□□ 0.815e-7■■■□□ 16.4
VPS13B-201ENST00000355155 DDX11Q96FC9 970 aa20.1■□□□□ 0.81
VPS13B-201ENST00000355155 ORC3Q9UBD5 711 aaPredicted RBP20.1■□□□□ 0.81
VPS13B-201ENST00000355155 DAGLAQ9Y4D2 1042 aa20.1■□□□□ 0.81
VPS13B-201ENST00000355155 ADAMTSL1Q8N6G6 1762 aa20.1■□□□□ 0.81
VPS13B-201ENST00000355155 NPM3O75607 178 aaKnown RBP20.1■□□□□ 0.81
VPS13B-201ENST00000355155 GTF2IP78347 998 aa20.1■□□□□ 0.81
VPS13B-201ENST00000355155 SYNE3Q6ZMZ3 975 aa20.1■□□□□ 0.81
VPS13B-201ENST00000355155 ZNF654Q8IZM8 581 aa20.1■□□□□ 0.81
VPS13B-201ENST00000355155 UBAC1Q9BSL1 405 aa20.1■□□□□ 0.81
VPS13B-201ENST00000355155 MYO3BQ8WXR4 1341 aa20.09■□□□□ 0.81
VPS13B-201ENST00000355155 H3BQV1 296 aa20.09■□□□□ 0.81
VPS13B-201ENST00000355155 KIAA2012Q0VF49 1180 aa20.09■□□□□ 0.81
VPS13B-201ENST00000355155 L1TD1Q5T7N2 865 aaKnown RBP20.09■□□□□ 0.81
VPS13B-201ENST00000355155 IFFO2Q5TF58 517 aa20.09■□□□□ 0.81
VPS13B-201ENST00000355155 IQCA1Q86XH1 822 aa20.09■□□□□ 0.81
VPS13B-201ENST00000355155 JAG2Q9Y219 1238 aa20.09■□□□□ 0.81
VPS13B-201ENST00000355155 COL2A1P02458 1487 aaPredicted RBP20.09■□□□□ 0.81
VPS13B-201ENST00000355155 CYP2D7A0A087X1C5 515 aa20.09■□□□□ 0.81
VPS13B-201ENST00000355155 PSMD1Q99460 953 aa20.09■□□□□ 0.81
VPS13B-201ENST00000355155 RBM28Q9NW13 759 aaKnown RBP20.09■□□□□ 0.81
VPS13B-201ENST00000355155 CPLX1O14810 134 aa20.08■□□□□ 0.81
VPS13B-201ENST00000355155 USP5P45974 858 aa20.08■□□□□ 0.81
VPS13B-201ENST00000355155 C16orf86Q6ZW13 317 aa20.08■□□□□ 0.81
VPS13B-201ENST00000355155 BRAPQ7Z569 592 aa20.08■□□□□ 0.81
VPS13B-201ENST00000355155 MCM9Q9NXL9 1143 aa20.08■□□□□ 0.81
VPS13B-201ENST00000355155 FLT1P17948 1338 aa20.08■□□□□ 0.81
VPS13B-201ENST00000355155 SMIM22K7EJ46 135 aa20.08■□□□□ 0.8
VPS13B-201ENST00000355155 RANBP6O60518 1105 aaKnown RBP20.08■□□□□ 0.8
VPS13B-201ENST00000355155 OLFM4Q6UX06 510 aa20.08■□□□□ 0.8
VPS13B-201ENST00000355155 NFXL1Q6ZNB6 911 aa20.08■□□□□ 0.8
VPS13B-201ENST00000355155 ILDR1Q86SU0 546 aaPredicted RBP20.08■□□□□ 0.8
VPS13B-201ENST00000355155 DGKHQ86XP1 1220 aa20.08■□□□□ 0.8
VPS13B-201ENST00000355155 WASF1Q92558 559 aa20.08■□□□□ 0.8
VPS13B-201ENST00000355155 USP17L8P0C7I0 530 aa20.08■□□□□ 0.8
VPS13B-201ENST00000355155 KCNA3P22001 575 aa20.08■□□□□ 0.8
VPS13B-201ENST00000355155 DEFB132Q7Z7B7 95 aa20.08■□□□□ 0.8
VPS13B-201ENST00000355155 AMOTL1Q8IY63 956 aa20.08■□□□□ 0.8
VPS13B-201ENST00000355155 CFAP45Q9UL16 551 aa20.08■□□□□ 0.8
VPS13B-201ENST00000355155 MYH6P13533 1939 aa20.07■□□□□ 0.8
VPS13B-201ENST00000355155 GADD45BO75293 160 aaPredicted RBP20.07■□□□□ 0.8
VPS13B-201ENST00000355155 CYP2D6P10635 497 aa20.07■□□□□ 0.8
VPS13B-201ENST00000355155 FUT2Q10981 343 aa20.07■□□□□ 0.8
VPS13B-201ENST00000355155 RTN1Q16799 776 aa20.07■□□□□ 0.8
VPS13B-201ENST00000355155 DACT2Q5SW24 774 aa20.07■□□□□ 0.8
VPS13B-201ENST00000355155 TTC6Q86TZ1 520 aa20.07■□□□□ 0.8
VPS13B-201ENST00000355155 FANCBQ8NB91 859 aa20.07■□□□□ 0.8
VPS13B-201ENST00000355155 RCOR1Q9UKL0 485 aa20.07■□□□□ 0.8
VPS13B-201ENST00000355155 SIPA1L1O43166 1804 aa20.07■□□□□ 0.8
VPS13B-201ENST00000355155 CHRNA5P30532 468 aa20.07■□□□□ 0.8
VPS13B-201ENST00000355155 TROAPQ12815 778 aa20.07■□□□□ 0.8
VPS13B-201ENST00000355155 ZSCAN23Q3MJ62 389 aa20.07■□□□□ 0.8
VPS13B-201ENST00000355155 SYAP1Q96A49 352 aaPredicted RBP20.07■□□□□ 0.8
VPS13B-201ENST00000355155 C8orf76Q96K31 380 aa20.07■□□□□ 0.8
VPS13B-201ENST00000355155 ZNF287Q9HBT7 754 aa20.07■□□□□ 0.8
VPS13B-201ENST00000355155 RIMBP2O15034 1052 aa20.06■□□□□ 0.8
VPS13B-201ENST00000355155 NCLP19338 710 aaKnown RBP20.06■□□□□ 0.8
VPS13B-201ENST00000355155 RRP12Q5JTH9 1297 aaKnown RBP20.06■□□□□ 0.8
VPS13B-201ENST00000355155 ZDHHC15Q96MV8 337 aa20.06■□□□□ 0.8
VPS13B-201ENST00000355155 RNF26Q9BY78 433 aaPredicted RBP20.06■□□□□ 0.8
VPS13B-201ENST00000355155 TMEM63CQ9P1W3 806 aa20.06■□□□□ 0.8
VPS13B-201ENST00000355155 FER1L6Q2WGJ9 1857 aa20.06■□□□□ 0.8
VPS13B-201ENST00000355155 TEX11Q8IYF3 940 aa20.06■□□□□ 0.8
VPS13B-201ENST00000355155 CRACR2BQ8N4Y2 399 aaPredicted RBP20.06■□□□□ 0.8
VPS13B-201ENST00000355155 TGFBRAP1Q8WUH2 860 aa20.06■□□□□ 0.8
VPS13B-201ENST00000355155 LEO1Q8WVC0 666 aaPredicted RBP20.06■□□□□ 0.8
VPS13B-201ENST00000355155 IARSP41252 1262 aaKnown RBP20.05■□□□□ 0.8
VPS13B-201ENST00000355155 RCSD1Q6JBY9 416 aa20.05■□□□□ 0.8
VPS13B-201ENST00000355155 ZNF396Q96N95 335 aaPredicted RBP20.05■□□□□ 0.8
VPS13B-201ENST00000355155 TGFB2P61812 414 aa20.05■□□□□ 0.8
VPS13B-201ENST00000355155 GABPAQ06546 454 aa20.05■□□□□ 0.8
VPS13B-201ENST00000355155 MICU3Q86XE3 530 aa20.05■□□□□ 0.8
VPS13B-201ENST00000355155 RTKN2Q8IZC4 609 aa20.05■□□□□ 0.8
VPS13B-201ENST00000355155 MORC2Q9Y6X9 1032 aaPredicted RBP20.05■□□□□ 0.8
VPS13B-201ENST00000355155 GOLGA6L3A6NEY3 463 aa20.04■□□□□ 0.8
VPS13B-201ENST00000355155 SSRP1Q08945 709 aaKnown RBP20.04■□□□□ 0.8
VPS13B-201ENST00000355155 IFIT1BQ5T764 474 aaKnown RBP20.04■□□□□ 0.8
VPS13B-201ENST00000355155 LETM1O95202 739 aaPredicted RBP20.04■□□□□ 0.8
VPS13B-201ENST00000355155 U2AF2P26368 475 aaKnown RBP eCLIP20.04■□□□□ 0.8
VPS13B-201ENST00000355155 KIF23Q02241 960 aaPredicted RBP20.04■□□□□ 0.8
VPS13B-201ENST00000355155 NAP1L2Q9ULW6 460 aaPredicted RBP20.04■□□□□ 0.8
VPS13B-201ENST00000355155 ECE2O60344 883 aa20.03■□□□□ 0.8
VPS13B-201ENST00000355155 DTNBO60941 627 aa20.03■□□□□ 0.8
VPS13B-201ENST00000355155 EVX2Q03828 476 aa20.03■□□□□ 0.8
VPS13B-201ENST00000355155 CAVIN1Q6NZI2 390 aaKnown RBP20.03■□□□□ 0.8
VPS13B-201ENST00000355155 CATIPQ7Z7H3 387 aa20.03■□□□□ 0.8
VPS13B-201ENST00000355155 TTLL6Q8N841 843 aa20.03■□□□□ 0.8
VPS13B-201ENST00000355155 RTEL1Q9NZ71 1219 aa20.03■□□□□ 0.8
VPS13B-201ENST00000355155 MYH8P13535 1937 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms