RNA–Protein interactions for RNA: ENST00000355059.8

NEIL1-201, Transcript of nei like DNA glycosylase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NEIL1, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-201ENST00000355059 CCDC96Q2M329 555 aa12.84□□□□□ -0.35
NEIL1-201ENST00000355059 ZNF526Q8TF50 670 aaPredicted RBP12.84□□□□□ -0.35
NEIL1-201ENST00000355059 FAM84BQ96KN1 310 aaPredicted RBP12.84□□□□□ -0.35
NEIL1-201ENST00000355059 MAST3O60307 1309 aa12.84□□□□□ -0.35
NEIL1-201ENST00000355059 GOLGA8AA7E2F4 631 aa12.83□□□□□ -0.35
NEIL1-201ENST00000355059 FGAP02671 866 aa12.83□□□□□ -0.35
NEIL1-201ENST00000355059 SF3B3Q15393 1217 aaKnown RBP12.83□□□□□ -0.35
NEIL1-201ENST00000355059 FAM47AQ5JRC9 791 aa12.83□□□□□ -0.35
NEIL1-201ENST00000355059 AOPEPQ8N6M6 819 aa12.83□□□□□ -0.35
NEIL1-201ENST00000355059 INCENPQ9NQS7 918 aa12.83□□□□□ -0.35
NEIL1-201ENST00000355059 HELLSQ9NRZ9 838 aa12.83□□□□□ -0.35
NEIL1-201ENST00000355059 HDAC9Q9UKV0 1011 aa12.83□□□□□ -0.35
NEIL1-201ENST00000355059 LEMD3Q9Y2U8 911 aa12.83□□□□□ -0.35
NEIL1-201ENST00000355059 PLSCR1O15162 318 aa12.83□□□□□ -0.36
NEIL1-201ENST00000355059 NR1I2O75469 434 aa12.83□□□□□ -0.36
NEIL1-201ENST00000355059 SKILP12757 684 aa12.83□□□□□ -0.36
NEIL1-201ENST00000355059 PDE4BQ07343 736 aa12.83□□□□□ -0.36
NEIL1-201ENST00000355059 CCDC34Q96HJ3 373 aa12.83□□□□□ -0.36
NEIL1-201ENST00000355059 ORC3Q9UBD5 711 aaPredicted RBP12.83□□□□□ -0.36
NEIL1-201ENST00000355059 AHDC1Q5TGY3 1603 aaPredicted RBP12.83□□□□□ -0.36
NEIL1-201ENST00000355059 TSPY3P0CV98 308 aa12.83□□□□□ -0.36
NEIL1-201ENST00000355059 TSPY8P0CW00 308 aa12.83□□□□□ -0.36
NEIL1-201ENST00000355059 SAFBQ15424 915 aaKnown RBP eCLIP12.83□□□□□ -0.36
NEIL1-201ENST00000355059 LCORLQ8N3X6 602 aa12.83□□□□□ -0.36
NEIL1-201ENST00000355059 TRERF1Q96PN7 1200 aa12.83□□□□□ -0.36
NEIL1-201ENST00000355059 RNF41Q9H4P4 317 aaPredicted RBP12.83□□□□□ -0.36
NEIL1-201ENST00000355059 GPR108Q9NPR9 543 aa12.83□□□□□ -0.36
NEIL1-201ENST00000355059 CTAGE5O15320 804 aa12.82□□□□□ -0.36
NEIL1-201ENST00000355059 DPEP1P16444 411 aa12.82□□□□□ -0.36
NEIL1-201ENST00000355059 SFPQP23246 707 aaKnown RBP eCLIP12.82□□□□□ -0.36
NEIL1-201ENST00000355059 CEP135Q66GS9 1140 aa12.82□□□□□ -0.36
NEIL1-201ENST00000355059 TMC6Q7Z403 805 aa12.82□□□□□ -0.36
NEIL1-201ENST00000355059 DISP2A7MBM2 1401 aa12.82□□□□□ -0.36
NEIL1-201ENST00000355059 MYO1BO43795 1136 aa12.82□□□□□ -0.36
NEIL1-201ENST00000355059 HLA-DOAP06340 250 aa12.82□□□□□ -0.36
NEIL1-201ENST00000355059 PSEN1P49768 467 aa12.82□□□□□ -0.36
NEIL1-201ENST00000355059 CFAP100Q494V2 611 aa12.82□□□□□ -0.36
NEIL1-201ENST00000355059 DALRD3Q5D0E6 543 aaKnown RBP12.82□□□□□ -0.36
NEIL1-201ENST00000355059 OTUD7BQ6GQQ9 843 aa12.82□□□□□ -0.36
NEIL1-201ENST00000355059 TRIM22Q8IYM9 498 aa12.82□□□□□ -0.36
NEIL1-201ENST00000355059 ZNF408Q9H9D4 720 aa12.82□□□□□ -0.36
NEIL1-201ENST00000355059 USP40Q9NVE5 1235 aa12.82□□□□□ -0.36
NEIL1-201ENST00000355059 UTYO14607 1347 aa12.82□□□□□ -0.36
NEIL1-201ENST00000355059 A0A087WWV3 80 aa12.82□□□□□ -0.36
NEIL1-201ENST00000355059 WTAPQ15007 396 aa12.82□□□□□ -0.36
NEIL1-201ENST00000355059 ZYXQ15942 572 aaKnown RBP12.82□□□□□ -0.36
NEIL1-201ENST00000355059 TTC14Q96N46 770 aa12.82□□□□□ -0.36
NEIL1-201ENST00000355059 CD209Q9NNX6 404 aa12.82□□□□□ -0.36
NEIL1-201ENST00000355059 PIM2Q9P1W9 311 aa12.82□□□□□ -0.36
NEIL1-201ENST00000355059 TCP10L2B9ZVM9 353 aa12.81□□□□□ -0.36
NEIL1-201ENST00000355059 BTDP43251 543 aa12.81□□□□□ -0.36
NEIL1-201ENST00000355059 MAP4K1Q92918 833 aa12.81□□□□□ -0.36
NEIL1-201ENST00000355059 FEZ1Q99689 392 aa12.81□□□□□ -0.36
NEIL1-201ENST00000355059 PLA2G12BQ9BX93 195 aa12.81□□□□□ -0.36
NEIL1-201ENST00000355059 GTPBP4Q9BZE4 634 aaKnown RBP12.81□□□□□ -0.36
NEIL1-201ENST00000355059 hCG_1642624A0A1W2PR95 340 aa12.81□□□□□ -0.36
NEIL1-201ENST00000355059 KIF18AQ8NI77 898 aa12.81□□□□□ -0.36
NEIL1-201ENST00000355059 CLSTN2Q9H4D0 955 aa12.81□□□□□ -0.36
NEIL1-201ENST00000355059 NRBP1Q9UHY1 535 aa12.81□□□□□ -0.36
NEIL1-201ENST00000355059 MECOMQ03112 1051 aa12.81□□□□□ -0.36
NEIL1-201ENST00000355059 HSP90AA4PQ58FG1 418 aa12.81□□□□□ -0.36
NEIL1-201ENST00000355059 DHX32Q7L7V1 743 aaKnown RBP12.81□□□□□ -0.36
NEIL1-201ENST00000355059 ESR2Q92731 530 aa12.81□□□□□ -0.36
NEIL1-201ENST00000355059 A0A1B0GVL5 298 aa12.8□□□□□ -0.36
NEIL1-201ENST00000355059 CTCFLQ8NI51 663 aaPredicted RBP12.8□□□□□ -0.36
NEIL1-201ENST00000355059 POLRMTO00411 1230 aaKnown RBP12.8□□□□□ -0.36
NEIL1-201ENST00000355059 U2AF2P26368 475 aaKnown RBP eCLIP12.8□□□□□ -0.36
NEIL1-201ENST00000355059 ZNF75DP51815 510 aa12.8□□□□□ -0.36
NEIL1-201ENST00000355059 CCDC93Q567U6 631 aa12.8□□□□□ -0.36
NEIL1-201ENST00000355059 IFNL3Q8IZI9 196 aa12.8□□□□□ -0.36
NEIL1-201ENST00000355059 SLC26A6Q9BXS9 759 aa12.8□□□□□ -0.36
NEIL1-201ENST00000355059 MARCKSP29966 332 aaPredicted RBP12.8□□□□□ -0.36
NEIL1-201ENST00000355059 ADD2P35612 726 aa12.8□□□□□ -0.36
NEIL1-201ENST00000355059 METAP2P50579 478 aaKnown RBP eCLIP12.8□□□□□ -0.36
NEIL1-201ENST00000355059 NECTIN1Q15223 517 aa12.8□□□□□ -0.36
NEIL1-201ENST00000355059 ZMYM1Q5SVZ6 1142 aa12.8□□□□□ -0.36
NEIL1-201ENST00000355059 JMYQ8N9B5 988 aa12.8□□□□□ -0.36
NEIL1-201ENST00000355059 TBC1D16Q8TBP0 767 aa12.8□□□□□ -0.36
NEIL1-201ENST00000355059 ZBTB12Q9Y330 459 aaPredicted RBP12.8□□□□□ -0.36
NEIL1-201ENST00000355059 CYP21A2P08686 494 aa12.79□□□□□ -0.36
NEIL1-201ENST00000355059 DLGAP5Q15398 846 aa12.79□□□□□ -0.36
NEIL1-201ENST00000355059 IFIT1BQ5T764 474 aaKnown RBP12.79□□□□□ -0.36
NEIL1-201ENST00000355059 CMTR1Q8N1G2 835 aaKnown RBP12.79□□□□□ -0.36
NEIL1-201ENST00000355059 HOOK1Q9UJC3 728 aaKnown RBP12.79□□□□□ -0.36
NEIL1-201ENST00000355059 MRPS27Q92552 414 aaKnown RBP12.79□□□□□ -0.36
NEIL1-201ENST00000355059 TEKT1Q969V4 418 aa12.79□□□□□ -0.36
NEIL1-201ENST00000355059 TMX1Q9H3N1 280 aa12.79□□□□□ -0.36
NEIL1-201ENST00000355059 GPHNQ9NQX3 736 aaPredicted RBP12.79□□□□□ -0.36
NEIL1-201ENST00000355059 MRVI1Q9Y6F6 885 aa12.79□□□□□ -0.36
NEIL1-201ENST00000355059 RPAP1Q9BWH6 1393 aaPredicted RBP12.79□□□□□ -0.36
NEIL1-201ENST00000355059 LOC102724159A0A0B4J2E5 919 aa12.79□□□□□ -0.36
NEIL1-201ENST00000355059 E7EWF7 191 aa12.79□□□□□ -0.36
NEIL1-201ENST00000355059 PWP2Q15269 919 aaKnown RBP12.79□□□□□ -0.36
NEIL1-201ENST00000355059 EAPPQ56P03 285 aaPredicted RBP12.79□□□□□ -0.36
NEIL1-201ENST00000355059 FTOQ9C0B1 505 aaKnown RBP eCLIP12.79□□□□□ -0.36
NEIL1-201ENST00000355059 KAT14Q9H8E8 782 aa12.79□□□□□ -0.36
NEIL1-201ENST00000355059 SPON1Q9HCB6 807 aa12.79□□□□□ -0.36
NEIL1-201ENST00000355059 COL16A1Q07092 1604 aaPredicted RBP12.79□□□□□ -0.36
NEIL1-201ENST00000355059 FAM196BA6NMK8 535 aa12.78□□□□□ -0.36
NEIL1-201ENST00000355059 LMOD1P29536 600 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms