RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 BRD1O95696 1058 aa24.11■■□□□ 1.45
TRIM4-202ENST00000354241 HDLBPQ00341 1268 aaKnown RBP24.11■■□□□ 1.45
TRIM4-202ENST00000354241 APOBEC3HQ6NTF7 200 aaKnown RBP24.11■■□□□ 1.45
TRIM4-202ENST00000354241 MRIQ9BWK5 157 aa24.11■■□□□ 1.45
TRIM4-202ENST00000354241 ROBO3Q96MS0 1386 aa24.11■■□□□ 1.45
TRIM4-202ENST00000354241 PSMD14O00487 310 aa24.1■■□□□ 1.45
TRIM4-202ENST00000354241 LIFRP42702 1097 aa24.1■■□□□ 1.45
TRIM4-202ENST00000354241 PLCD1P51178 756 aa24.1■■□□□ 1.45
TRIM4-202ENST00000354241 WTAPQ15007 396 aa24.1■■□□□ 1.45
TRIM4-202ENST00000354241 CDC42EP5Q6NZY7 148 aa24.1■■□□□ 1.45
TRIM4-202ENST00000354241 RSBN1LQ6PCB5 846 aaPredicted RBP24.1■■□□□ 1.45
TRIM4-202ENST00000354241 DYNLL2Q96FJ2 89 aa24.1■■□□□ 1.45
TRIM4-202ENST00000354241 LLPHQ9BRT6 129 aaKnown RBP24.1■■□□□ 1.45
TRIM4-202ENST00000354241 MTA3Q9BTC8 594 aa24.1■■□□□ 1.45
TRIM4-202ENST00000354241 ZNRF3Q9ULT6 936 aa24.1■■□□□ 1.45
TRIM4-202ENST00000354241 CCDC69A6NI79 296 aa24.1■■□□□ 1.45
TRIM4-202ENST00000354241 NFKBIEO00221 500 aa24.1■■□□□ 1.45
TRIM4-202ENST00000354241 SYT1P21579 422 aa24.1■■□□□ 1.45
TRIM4-202ENST00000354241 SGMS1Q86VZ5 419 aa24.1■■□□□ 1.45
TRIM4-202ENST00000354241 CHMP4CQ96CF2 233 aa24.1■■□□□ 1.45
TRIM4-202ENST00000354241 GBP4Q96PP9 640 aa24.1■■□□□ 1.45
TRIM4-202ENST00000354241 HPS5Q9UPZ3 1129 aa24.1■■□□□ 1.45
TRIM4-202ENST00000354241 PCDHAC2Q9Y5I4 1007 aa24.1■■□□□ 1.45
TRIM4-202ENST00000354241 GOLGB1Q14789 3259 aaKnown RBP24.09■■□□□ 1.45
TRIM4-202ENST00000354241 MYO3BQ8WXR4 1341 aa24.09■■□□□ 1.45
TRIM4-202ENST00000354241 WDR33Q9C0J8 1336 aaKnown RBP24.09■■□□□ 1.45
TRIM4-202ENST00000354241 ARFGEF1Q9Y6D6 1849 aa24.09■■□□□ 1.45
TRIM4-202ENST00000354241 SERPINA10Q9UK55 444 aa24.09■■□□□ 1.45
TRIM4-202ENST00000354241 STX6O43752 255 aa24.08■■□□□ 1.45
TRIM4-202ENST00000354241 WDHD1O75717 1129 aaPredicted RBP24.08■■□□□ 1.45
TRIM4-202ENST00000354241 APOA5Q6Q788 366 aa24.08■■□□□ 1.45
TRIM4-202ENST00000354241 NSUN7Q8NE18 718 aaKnown RBP24.08■■□□□ 1.45
TRIM4-202ENST00000354241 TNKSO95271 1327 aa24.08■■□□□ 1.45
TRIM4-202ENST00000354241 CTDNEP1O95476 244 aa24.08■■□□□ 1.44
TRIM4-202ENST00000354241 VIL1P09327 827 aaKnown RBP24.08■■□□□ 1.44
TRIM4-202ENST00000354241 FAM47AQ5JRC9 791 aa24.08■■□□□ 1.44
TRIM4-202ENST00000354241 IQCA1Q86XH1 822 aa24.08■■□□□ 1.44
TRIM4-202ENST00000354241 DDX11Q96FC9 970 aa24.08■■□□□ 1.44
TRIM4-202ENST00000354241 ZSCAN10Q96SZ4 725 aaPredicted RBP24.08■■□□□ 1.44
TRIM4-202ENST00000354241 MKNK2Q9HBH9 465 aa24.08■■□□□ 1.44
TRIM4-202ENST00000354241 DDX4Q9NQI0 724 aaKnown RBP24.08■■□□□ 1.44
TRIM4-202ENST00000354241 SLC12A7Q9Y666 1083 aa24.08■■□□□ 1.44
TRIM4-202ENST00000354241 PTPDC1A2A3K4 754 aa24.07■■□□□ 1.44
TRIM4-202ENST00000354241 MCM4P33991 863 aa24.07■■□□□ 1.44
TRIM4-202ENST00000354241 METAP2P50579 478 aaKnown RBP eCLIP24.07■■□□□ 1.44
TRIM4-202ENST00000354241 LARP1BQ659C4 914 aaKnown RBP24.07■■□□□ 1.44
TRIM4-202ENST00000354241 MICU3Q86XE3 530 aa24.07■■□□□ 1.44
TRIM4-202ENST00000354241 SMARCC2Q8TAQ2 1214 aa24.07■■□□□ 1.44
TRIM4-202ENST00000354241 ZBTB43O43298 467 aa24.06■■□□□ 1.44
TRIM4-202ENST00000354241 RXRAP19793 462 aa24.06■■□□□ 1.44
TRIM4-202ENST00000354241 SYNE3Q6ZMZ3 975 aa24.06■■□□□ 1.44
TRIM4-202ENST00000354241 TMTC2Q8N394 836 aa24.06■■□□□ 1.44
TRIM4-202ENST00000354241 JDP2Q8WYK2 163 aa24.06■■□□□ 1.44
TRIM4-202ENST00000354241 TSPY2A6NKD2 308 aa24.06■■□□□ 1.44
TRIM4-202ENST00000354241 DHX16O60231 1041 aaKnown RBP24.06■■□□□ 1.44
TRIM4-202ENST00000354241 SEC23AQ15436 765 aa24.06■■□□□ 1.44
TRIM4-202ENST00000354241 CFAP100Q494V2 611 aa24.06■■□□□ 1.44
TRIM4-202ENST00000354241 FAM184AQ8NB25 1140 aa24.06■■□□□ 1.44
TRIM4-202ENST00000354241 MYL10Q9BUA6 226 aa24.06■■□□□ 1.44
TRIM4-202ENST00000354241 PDCP20941 246 aa24.05■■□□□ 1.44
TRIM4-202ENST00000354241 RASSF7Q02833 373 aa24.05■■□□□ 1.44
TRIM4-202ENST00000354241 SLC44A5Q8NCS7 719 aa24.05■■□□□ 1.44
TRIM4-202ENST00000354241 ZBTB12Q9Y330 459 aaPredicted RBP24.05■■□□□ 1.44
TRIM4-202ENST00000354241 GOLGA8AA7E2F4 631 aa24.04■■□□□ 1.44
TRIM4-202ENST00000354241 CPLX1O14810 134 aa24.04■■□□□ 1.44
TRIM4-202ENST00000354241 ZSCAN22P10073 491 aaPredicted RBP24.04■■□□□ 1.44
TRIM4-202ENST00000354241 HMGN5P82970 282 aaKnown RBP24.04■■□□□ 1.44
TRIM4-202ENST00000354241 CCDC144CPQ8IYA2 1237 aa24.04■■□□□ 1.44
TRIM4-202ENST00000354241 ENAHQ8N8S7 591 aaPredicted RBP24.04■■□□□ 1.44
TRIM4-202ENST00000354241 ZNF287Q9HBT7 754 aa24.04■■□□□ 1.44
TRIM4-202ENST00000354241 VPS37CA5D8V6 355 aaPredicted RBP24.04■■□□□ 1.44
TRIM4-202ENST00000354241 PPFIA3O75145 1194 aa24.04■■□□□ 1.44
TRIM4-202ENST00000354241 BAG4O95429 457 aaKnown RBP24.04■■□□□ 1.44
TRIM4-202ENST00000354241 C16orf86Q6ZW13 317 aa24.04■■□□□ 1.44
TRIM4-202ENST00000354241 OSBPL5Q9H0X9 879 aaPredicted RBP24.04■■□□□ 1.44
TRIM4-202ENST00000354241 CACNB3P54284 484 aa24.03■■□□□ 1.44
TRIM4-202ENST00000354241 TFAP4Q01664 338 aa24.03■■□□□ 1.44
TRIM4-202ENST00000354241 CXCL9Q07325 125 aa24.03■■□□□ 1.44
TRIM4-202ENST00000354241 NFIAQ12857 509 aa24.03■■□□□ 1.44
TRIM4-202ENST00000354241 IFIT1BQ5T764 474 aaKnown RBP24.03■■□□□ 1.44
TRIM4-202ENST00000354241 CLEC17AQ6ZS10 378 aa24.03■■□□□ 1.44
TRIM4-202ENST00000354241 ILDR2Q71H61 639 aa24.03■■□□□ 1.44
TRIM4-202ENST00000354241 TTC6Q86TZ1 520 aa24.03■■□□□ 1.44
TRIM4-202ENST00000354241 ZNF444Q8N0Y2 327 aaPredicted RBP24.03■■□□□ 1.44
TRIM4-202ENST00000354241 GMLQ99445 158 aa24.03■■□□□ 1.44
TRIM4-202ENST00000354241 HDAC9Q9UKV0 1011 aa24.03■■□□□ 1.44
TRIM4-202ENST00000354241 LTBP3Q9NS15 1303 aa24.03■■□□□ 1.44
TRIM4-202ENST00000354241 CDK8P49336 464 aa24.02■■□□□ 1.44
TRIM4-202ENST00000354241 NT5C2P49902 561 aa24.02■■□□□ 1.44
TRIM4-202ENST00000354241 MTMR6Q9Y217 621 aa24.02■■□□□ 1.44
TRIM4-202ENST00000354241 NMT2O60551 498 aa24.02■■□□□ 1.44
TRIM4-202ENST00000354241 CIAPIN1Q6FI81 312 aa24.02■■□□□ 1.44
TRIM4-202ENST00000354241 ZNF654Q8IZM8 581 aa24.02■■□□□ 1.44
TRIM4-202ENST00000354241 OGFOD1Q8N543 542 aa24.02■■□□□ 1.44
TRIM4-202ENST00000354241 KIF3AQ9Y496 699 aa24.02■■□□□ 1.44
TRIM4-202ENST00000354241 MYH8P13535 1937 aa24.01■■□□□ 1.43
TRIM4-202ENST00000354241 CDC27P30260 824 aa24.01■■□□□ 1.43
TRIM4-202ENST00000354241 FHDC1Q9C0D6 1143 aaPredicted RBP24.01■■□□□ 1.43
TRIM4-202ENST00000354241 TDRD3Q9H7E2 651 aaKnown RBP24.01■■□□□ 1.43
TRIM4-202ENST00000354241 DDX11L8A8MPP1 907 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms