RNA–Protein interactions for RNA: ENST00000354192.7

APP-203, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-203ENST00000354192 ITGB4P16144 1822 aa20.92■□□□□ 0.94
APP-203ENST00000354192 LAMA4Q16363 1823 aa20.92■□□□□ 0.94
APP-203ENST00000354192 USP17L8P0C7I0 530 aa20.91■□□□□ 0.94
APP-203ENST00000354192 ZNF174Q15697 407 aa20.91■□□□□ 0.94
APP-203ENST00000354192 CATIPQ7Z7H3 387 aa20.91■□□□□ 0.94
APP-203ENST00000354192 NOSTRINQ8IVI9 506 aa20.91■□□□□ 0.94
APP-203ENST00000354192 TRMT44Q8IYL2 757 aaKnown RBP20.91■□□□□ 0.94
APP-203ENST00000354192 ARHGEF1Q92888 912 aaKnown RBP20.91■□□□□ 0.94
APP-203ENST00000354192 XPO4Q9C0E2 1151 aaKnown RBP20.91■□□□□ 0.94
APP-203ENST00000354192 KCNH3Q9ULD8 1083 aa20.91■□□□□ 0.94
APP-203ENST00000354192 GNAT2P19087 354 aa20.91■□□□□ 0.94
APP-203ENST00000354192 CFAP100Q494V2 611 aa20.91■□□□□ 0.94
APP-203ENST00000354192 FAM177A1Q8N128 213 aaPredicted RBP20.91■□□□□ 0.94
APP-203ENST00000354192 DYNLL2Q96FJ2 89 aa20.91■□□□□ 0.94
APP-203ENST00000354192 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.91■□□□□ 0.94
APP-203ENST00000354192 V9GYY5 206 aaPredicted RBP20.91■□□□□ 0.94
APP-203ENST00000354192 PLEKHG2Q9H7P9 1386 aa20.91■□□□□ 0.94
APP-203ENST00000354192 UBR2Q8IWV8 1755 aa20.91■□□□□ 0.94
APP-203ENST00000354192 TNNT1P13805 278 aa20.91■□□□□ 0.94
APP-203ENST00000354192 FAM196AQ6ZSG2 479 aa20.91■□□□□ 0.94
APP-203ENST00000354192 ENAHQ8N8S7 591 aaPredicted RBP20.91■□□□□ 0.94
APP-203ENST00000354192 BSDC1Q9NW68 430 aaPredicted RBP20.91■□□□□ 0.94
APP-203ENST00000354192 F8W031 263 aaPredicted RBP20.9■□□□□ 0.94
APP-203ENST00000354192 CDK11BP21127 795 aaKnown RBP20.9■□□□□ 0.94
APP-203ENST00000354192 NFIXQ14938 502 aa20.9■□□□□ 0.94
APP-203ENST00000354192 RBM43Q6ZSC3 357 aaKnown RBP20.9■□□□□ 0.94
APP-203ENST00000354192 STX8Q9UNK0 236 aa20.9■□□□□ 0.94
APP-203ENST00000354192 THRAP3Q9Y2W1 955 aaKnown RBP20.9■□□□□ 0.94
APP-203ENST00000354192 SLIT2O94813 1529 aa20.9■□□□□ 0.94
APP-203ENST00000354192 TAF1P21675 1872 aa20.9■□□□□ 0.94
APP-203ENST00000354192 USP27XA6NNY8 438 aa20.9■□□□□ 0.94
APP-203ENST00000354192 ATL3Q6DD88 541 aa20.9■□□□□ 0.94
APP-203ENST00000354192 TMX1Q9H3N1 280 aa20.9■□□□□ 0.94
APP-203ENST00000354192 BCL2L12Q9HB09 334 aa20.9■□□□□ 0.94
APP-203ENST00000354192 RAD21O60216 631 aa20.89■□□□□ 0.94
APP-203ENST00000354192 PLA2G4DQ86XP0 818 aa20.89■□□□□ 0.94
APP-203ENST00000354192 DHX58Q96C10 678 aa20.89■□□□□ 0.94
APP-203ENST00000354192 AK7Q96M32 723 aa20.89■□□□□ 0.94
APP-203ENST00000354192 LIFRP42702 1097 aa20.89■□□□□ 0.93
APP-203ENST00000354192 SHANK3Q9BYB0 1731 aa20.89■□□□□ 0.93
APP-203ENST00000354192 CPVLQ9H3G5 476 aa20.89■□□□□ 0.93
APP-203ENST00000354192 RIOK3O14730 519 aaKnown RBP20.89■□□□□ 0.93
APP-203ENST00000354192 CMA1P23946 247 aa20.89■□□□□ 0.93
APP-203ENST00000354192 STX17P56962 302 aa20.89■□□□□ 0.93
APP-203ENST00000354192 CRACR2BQ8N4Y2 399 aaPredicted RBP20.89■□□□□ 0.93
APP-203ENST00000354192 SLC44A5Q8NCS7 719 aa20.89■□□□□ 0.93
APP-203ENST00000354192 STAG1Q8WVM7 1258 aa20.89■□□□□ 0.93
APP-203ENST00000354192 ZSCAN10Q96SZ4 725 aaPredicted RBP20.89■□□□□ 0.93
APP-203ENST00000354192 NUP98P52948 1817 aa20.88■□□□□ 0.93
APP-203ENST00000354192 FMNL1O95466 1100 aaPredicted RBP20.88■□□□□ 0.93
APP-203ENST00000354192 VEGFAP15692 232 aaPredicted RBP20.88■□□□□ 0.93
APP-203ENST00000354192 CDC25AP30304 524 aa20.88■□□□□ 0.93
APP-203ENST00000354192 TPM4P67936 248 aa20.88■□□□□ 0.93
APP-203ENST00000354192 UBE4AQ14139 1066 aa20.88■□□□□ 0.93
APP-203ENST00000354192 RASSF8Q8NHQ8 419 aa20.88■□□□□ 0.93
APP-203ENST00000354192 ZNF384Q8TF68 577 aa20.88■□□□□ 0.93
APP-203ENST00000354192 PCDHA5Q9Y5H7 936 aa20.88■□□□□ 0.93
APP-203ENST00000354192 CCDC196A0A1B0GTZ2 297 aa20.88■□□□□ 0.93
APP-203ENST00000354192 IFNAR1P17181 557 aa20.88■□□□□ 0.93
APP-203ENST00000354192 SGMS1Q86VZ5 419 aa20.88■□□□□ 0.93
APP-203ENST00000354192 MKNK2Q9HBH9 465 aa20.88■□□□□ 0.93
APP-203ENST00000354192 SERTAD1Q9UHV2 236 aa20.88■□□□□ 0.93
APP-203ENST00000354192 ROBO1Q9Y6N7 1651 aa20.87■□□□□ 0.93
APP-203ENST00000354192 OLFM4Q6UX06 510 aa20.87■□□□□ 0.93
APP-203ENST00000354192 KRI1Q8N9T8 703 aaKnown RBP20.87■□□□□ 0.93
APP-203ENST00000354192 A0A1W2PQ27 194 aa20.87■□□□□ 0.93
APP-203ENST00000354192 A0A1W2PQ64 194 aa20.87■□□□□ 0.93
APP-203ENST00000354192 A0A1W2PQD8 194 aa20.87■□□□□ 0.93
APP-203ENST00000354192 MMP1P03956 469 aa20.87■□□□□ 0.93
APP-203ENST00000354192 CTR9Q6PD62 1173 aa20.87■□□□□ 0.93
APP-203ENST00000354192 WASF1Q92558 559 aa20.87■□□□□ 0.93
APP-203ENST00000354192 VAT1LQ9HCJ6 419 aa20.87■□□□□ 0.93
APP-203ENST00000354192 UTRNP46939 3433 aa20.87■□□□□ 0.93
APP-203ENST00000354192 ZNF804BA4D1E1 1349 aa20.87■□□□□ 0.93
APP-203ENST00000354192 NAA30Q147X3 362 aaPredicted RBP20.87■□□□□ 0.93
APP-203ENST00000354192 EARS2Q5JPH6 523 aaKnown RBP20.87■□□□□ 0.93
APP-203ENST00000354192 MAPKAPK5Q8IW41 473 aa20.87■□□□□ 0.93
APP-203ENST00000354192 CTCFLQ8NI51 663 aaPredicted RBP20.87■□□□□ 0.93
APP-203ENST00000354192 RASGRP4Q8TDF6 673 aa20.87■□□□□ 0.93
APP-203ENST00000354192 DEXIO95424 95 aa20.86■□□□□ 0.93
APP-203ENST00000354192 ALX1Q15699 326 aa20.86■□□□□ 0.93
APP-203ENST00000354192 GPKOWQ92917 476 aaPredicted RBP eCLIP20.86■□□□□ 0.93
APP-203ENST00000354192 PLIN2Q99541 437 aa20.86■□□□□ 0.93
APP-203ENST00000354192 CRNKL1Q9BZJ0 848 aaKnown RBP20.86■□□□□ 0.93
APP-203ENST00000354192 MYH14Q7Z406 1995 aaKnown RBP20.86■□□□□ 0.93
APP-203ENST00000354192 TPM3P06753 285 aa20.86■□□□□ 0.93
APP-203ENST00000354192 TGFBRAP1Q8WUH2 860 aa20.86■□□□□ 0.93
APP-203ENST00000354192 RIOK1Q9BRS2 568 aaKnown RBP20.86■□□□□ 0.93
APP-203ENST00000354192 GOLGA8HP0CJ92 632 aa20.85■□□□□ 0.93
APP-203ENST00000354192 TOB1P50616 345 aaPredicted RBP20.85■□□□□ 0.93
APP-203ENST00000354192 NLRP5P59047 1200 aa20.85■□□□□ 0.93
APP-203ENST00000354192 LRRC8AQ8IWT6 810 aa20.85■□□□□ 0.93
APP-203ENST00000354192 EPSTI1Q96J88 318 aa20.85■□□□□ 0.93
APP-203ENST00000354192 AKAP11Q9UKA4 1901 aa20.85■□□□□ 0.93
APP-203ENST00000354192 VWA3AA6NCI4 1184 aa20.85■□□□□ 0.93
APP-203ENST00000354192 RIMBP2O15034 1052 aa20.85■□□□□ 0.93
APP-203ENST00000354192 XBP1P17861 261 aa20.85■□□□□ 0.93
APP-203ENST00000354192 GRIK5Q16478 980 aa20.85■□□□□ 0.93
APP-203ENST00000354192 TRAPPC3LQ5T215 181 aa20.85■□□□□ 0.93
APP-203ENST00000354192 CLEC4GQ6UXB4 293 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms