RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 MAEAQ7L5Y9 396 aa15.55■□□□□ 0.08
SMC6-201ENST00000351948 FAM200AQ8TCP9 573 aa15.55■□□□□ 0.08
SMC6-201ENST00000351948 ZNF526Q8TF50 670 aaPredicted RBP15.55■□□□□ 0.08
SMC6-201ENST00000351948 FAM212AQ96EL1 285 aa15.55■□□□□ 0.08
SMC6-201ENST00000351948 TXNRD1Q16881 649 aa15.55■□□□□ 0.08
SMC6-201ENST00000351948 ZMYM1Q5SVZ6 1142 aa15.55■□□□□ 0.08
SMC6-201ENST00000351948 PNMA1Q8ND90 353 aa15.55■□□□□ 0.08
SMC6-201ENST00000351948 PIH1D3Q9NQM4 214 aaKnown RBP15.55■□□□□ 0.08
SMC6-201ENST00000351948 NARFQ9UHQ1 456 aa15.55■□□□□ 0.08
SMC6-201ENST00000351948 JCADQ9P266 1359 aa15.55■□□□□ 0.08
SMC6-201ENST00000351948 UBE3CQ15386 1083 aa15.55■□□□□ 0.08
SMC6-201ENST00000351948 MARCH10Q8NA82 808 aaPredicted RBP15.55■□□□□ 0.08
SMC6-201ENST00000351948 LRRC27Q9C0I9 530 aa15.55■□□□□ 0.08
SMC6-201ENST00000351948 SETBP1Q9Y6X0 1596 aa15.55■□□□□ 0.08
SMC6-201ENST00000351948 GADD45BO75293 160 aaPredicted RBP15.54■□□□□ 0.08
SMC6-201ENST00000351948 KIF4BQ2VIQ3 1234 aa15.54■□□□□ 0.08
SMC6-201ENST00000351948 GPKOWQ92917 476 aaPredicted RBP eCLIP15.54■□□□□ 0.08
SMC6-201ENST00000351948 BIN2Q9UBW5 565 aaPredicted RBP15.54■□□□□ 0.08
SMC6-201ENST00000351948 ERCC3P19447 782 aa15.54■□□□□ 0.08
SMC6-201ENST00000351948 ARID5AQ03989 594 aa15.54■□□□□ 0.08
SMC6-201ENST00000351948 ZNF771Q7L3S4 317 aaPredicted RBP15.54■□□□□ 0.08
SMC6-201ENST00000351948 VPS36Q86VN1 386 aa15.54■□□□□ 0.08
SMC6-201ENST00000351948 TXLNBQ8N3L3 684 aa15.54■□□□□ 0.08
SMC6-201ENST00000351948 IQUBQ8NA54 791 aa15.54■□□□□ 0.08
SMC6-201ENST00000351948 AGLP35573 1532 aa15.54■□□□□ 0.08
SMC6-201ENST00000351948 FAM13AO94988 1023 aa15.54■□□□□ 0.08
SMC6-201ENST00000351948 CERKLQ49MI3 558 aaPredicted RBP15.54■□□□□ 0.08
SMC6-201ENST00000351948 LUZP1Q86V48 1076 aa15.54■□□□□ 0.08
SMC6-201ENST00000351948 GTF3C6Q969F1 213 aa15.54■□□□□ 0.08
SMC6-201ENST00000351948 CENPHQ9H3R5 247 aa15.54■□□□□ 0.08
SMC6-201ENST00000351948 PTGS1P23219 599 aa15.54■□□□□ 0.08
SMC6-201ENST00000351948 GRAPQ13588 217 aa15.54■□□□□ 0.08
SMC6-201ENST00000351948 POLA2Q14181 598 aa15.54■□□□□ 0.08
SMC6-201ENST00000351948 TTC38Q5R3I4 469 aa15.54■□□□□ 0.08
SMC6-201ENST00000351948 GRAPLQ8TC17 118 aaPredicted RBP15.54■□□□□ 0.08
SMC6-201ENST00000351948 LLPHQ9BRT6 129 aaKnown RBP15.54■□□□□ 0.08
SMC6-201ENST00000351948 POTEJP0CG39 1038 aa15.53■□□□□ 0.08
SMC6-201ENST00000351948 CERS3Q8IU89 383 aa15.53■□□□□ 0.08
SMC6-201ENST00000351948 CCT6AP40227 531 aaKnown RBP15.53■□□□□ 0.08
SMC6-201ENST00000351948 CACNB3P54284 484 aa15.53■□□□□ 0.08
SMC6-201ENST00000351948 FAM193AP78312 1265 aa15.53■□□□□ 0.08
SMC6-201ENST00000351948 GPR108Q9NPR9 543 aa15.53■□□□□ 0.08
SMC6-201ENST00000351948 POLR2DO15514 142 aaKnown RBP15.53■□□□□ 0.08
SMC6-201ENST00000351948 ADCY7P51828 1080 aa15.53■□□□□ 0.08
SMC6-201ENST00000351948 MAP4K1Q92918 833 aa15.53■□□□□ 0.08
SMC6-201ENST00000351948 PAGR1Q9BTK6 254 aa15.53■□□□□ 0.08
SMC6-201ENST00000351948 GINS2Q9Y248 185 aa15.53■□□□□ 0.08
SMC6-201ENST00000351948 RDXP35241 583 aaKnown RBP15.53■□□□□ 0.08
SMC6-201ENST00000351948 MCAMP43121 646 aa15.53■□□□□ 0.08
SMC6-201ENST00000351948 CLEC4GQ6UXB4 293 aa15.53■□□□□ 0.08
SMC6-201ENST00000351948 CCDC150Q8NCX0 1101 aa15.53■□□□□ 0.08
SMC6-201ENST00000351948 TM6SF1Q9BZW5 370 aa15.53■□□□□ 0.08
SMC6-201ENST00000351948 ACBD3Q9H3P7 528 aa15.53■□□□□ 0.08
SMC6-201ENST00000351948 NCAPD2Q15021 1401 aa15.53■□□□□ 0.08
SMC6-201ENST00000351948 SPAG5Q96R06 1193 aa15.52■□□□□ 0.08
SMC6-201ENST00000351948 RIMS1Q86UR5 1692 aaKnown RBP15.52■□□□□ 0.08
SMC6-201ENST00000351948 SORBS3O60504 671 aa15.52■□□□□ 0.08
SMC6-201ENST00000351948 FAM114A1Q8IWE2 563 aa15.52■□□□□ 0.08
SMC6-201ENST00000351948 FANCBQ8NB91 859 aa15.52■□□□□ 0.08
SMC6-201ENST00000351948 DYNLL2Q96FJ2 89 aa15.52■□□□□ 0.08
SMC6-201ENST00000351948 MYO3AQ8NEV4 1616 aa15.52■□□□□ 0.08
SMC6-201ENST00000351948 ZSCAN12O43309 604 aa15.52■□□□□ 0.07
SMC6-201ENST00000351948 GDF11O95390 407 aa15.52■□□□□ 0.07
SMC6-201ENST00000351948 USP17L8P0C7I0 530 aa15.52■□□□□ 0.07
SMC6-201ENST00000351948 HARSP12081 509 aaKnown RBP15.52■□□□□ 0.07
SMC6-201ENST00000351948 ADD2P35612 726 aa15.52■□□□□ 0.07
SMC6-201ENST00000351948 NCAPH2Q6IBW4 605 aa15.52■□□□□ 0.07
SMC6-201ENST00000351948 DPY19L2Q6NUT2 758 aa15.52■□□□□ 0.07
SMC6-201ENST00000351948 CCDC186Q7Z3E2 898 aa15.52■□□□□ 0.07
SMC6-201ENST00000351948 CSRNP1Q96S65 589 aa15.52■□□□□ 0.07
SMC6-201ENST00000351948 KIF5CO60282 957 aa15.52■□□□□ 0.07
SMC6-201ENST00000351948 ICA1Q05084 483 aa15.52■□□□□ 0.07
SMC6-201ENST00000351948 AXDND1Q5T1B0 1012 aaPredicted RBP15.52■□□□□ 0.07
SMC6-201ENST00000351948 ZSWIM6Q9HCJ5 1215 aa15.52■□□□□ 0.07
SMC6-201ENST00000351948 CD2BP2O95400 341 aaKnown RBP15.51■□□□□ 0.07
SMC6-201ENST00000351948 KCNH3Q9ULD8 1083 aa15.51■□□□□ 0.07
SMC6-201ENST00000351948 KLRF2D3W0D1 207 aa15.51■□□□□ 0.07
SMC6-201ENST00000351948 XRCC6P12956 609 aaKnown RBP eCLIP15.51■□□□□ 0.07
SMC6-201ENST00000351948 NOP2P46087 812 aaKnown RBP15.51■□□□□ 0.07
SMC6-201ENST00000351948 NONOQ15233 471 aaKnown RBP eCLIP15.51■□□□□ 0.07
SMC6-201ENST00000351948 LEO1Q8WVC0 666 aaPredicted RBP15.51■□□□□ 0.07
SMC6-201ENST00000351948 BSDC1Q9NW68 430 aaPredicted RBP15.51■□□□□ 0.07
SMC6-201ENST00000351948 UQCRHLA0A096LP55 91 aa15.51■□□□□ 0.07
SMC6-201ENST00000351948 UQCRHP07919 91 aa15.51■□□□□ 0.07
SMC6-201ENST00000351948 PSDA5PKW4 1024 aaPredicted RBP15.51■□□□□ 0.07
SMC6-201ENST00000351948 SMCO2A6NFE2 343 aa15.51■□□□□ 0.07
SMC6-201ENST00000351948 OSBPL3Q9H4L5 887 aa15.51■□□□□ 0.07
SMC6-201ENST00000351948 AKR1B10O60218 316 aa15.5■□□□□ 0.07
SMC6-201ENST00000351948 PHACTR2O75167 634 aa15.5■□□□□ 0.07
SMC6-201ENST00000351948 PRDX5P30044 214 aa15.5■□□□□ 0.07
SMC6-201ENST00000351948 FAM160A1Q05DH4 1040 aa15.5■□□□□ 0.07
SMC6-201ENST00000351948 TNFAIP1Q13829 316 aa15.5■□□□□ 0.07
SMC6-201ENST00000351948 SMCR8Q8TEV9 937 aaPredicted RBP15.5■□□□□ 0.07
SMC6-201ENST00000351948 ADCY9O60503 1353 aa15.5■□□□□ 0.07
SMC6-201ENST00000351948 MECOMQ03112 1051 aa15.5■□□□□ 0.07
SMC6-201ENST00000351948 PI4K2BQ8TCG2 481 aa15.5■□□□□ 0.07
SMC6-201ENST00000351948 IRX3P78415 501 aaPredicted RBP15.5■□□□□ 0.07
SMC6-201ENST00000351948 MYO6Q9UM54 1294 aa15.5■□□□□ 0.07
SMC6-201ENST00000351948 MINPP1Q9UNW1 487 aa15.5■□□□□ 0.07
SMC6-201ENST00000351948 TEX35Q5T0J7 233 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms