RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 USP17L12C9JPN9 530 aa17.31■□□□□ 0.36
PTPRO-202ENST00000348962 USP17L21D6R901 530 aa17.31■□□□□ 0.36
PTPRO-202ENST00000348962 KRT5P13647 590 aa17.31■□□□□ 0.36
PTPRO-202ENST00000348962 FAM160A1Q05DH4 1040 aa17.31■□□□□ 0.36
PTPRO-202ENST00000348962 ARHGEF6Q15052 776 aa17.31■□□□□ 0.36
PTPRO-202ENST00000348962 VWA3BQ502W6 1294 aa17.31■□□□□ 0.36
PTPRO-202ENST00000348962 MCTP2Q6DN12 878 aa17.31■□□□□ 0.36
PTPRO-202ENST00000348962 CALUO43852 315 aaPredicted RBP17.31■□□□□ 0.36
PTPRO-202ENST00000348962 HSF2BPO75031 334 aa17.31■□□□□ 0.36
PTPRO-202ENST00000348962 TRIM37O94972 964 aa17.31■□□□□ 0.36
PTPRO-202ENST00000348962 OTUD7BQ6GQQ9 843 aa17.31■□□□□ 0.36
PTPRO-202ENST00000348962 TTLL7Q6ZT98 887 aa17.31■□□□□ 0.36
PTPRO-202ENST00000348962 KRT27Q7Z3Y8 459 aa17.31■□□□□ 0.36
PTPRO-202ENST00000348962 REXO1Q8N1G1 1221 aaKnown RBP17.31■□□□□ 0.36
PTPRO-202ENST00000348962 PAGR1Q9BTK6 254 aa17.31■□□□□ 0.36
PTPRO-202ENST00000348962 TXNDC16Q9P2K2 825 aa17.31■□□□□ 0.36
PTPRO-202ENST00000348962 MAP3K15Q6ZN16 1313 aa17.31■□□□□ 0.36
PTPRO-202ENST00000348962 DDX39AO00148 427 aaKnown RBP17.3■□□□□ 0.36
PTPRO-202ENST00000348962 NDC80O14777 642 aa17.3■□□□□ 0.36
PTPRO-202ENST00000348962 GLG1Q92896 1179 aa17.3■□□□□ 0.36
PTPRO-202ENST00000348962 IL6STP40189 918 aaPredicted RBP17.3■□□□□ 0.36
PTPRO-202ENST00000348962 MYL5Q02045 173 aa17.3■□□□□ 0.36
PTPRO-202ENST00000348962 DHX37Q8IY37 1157 aaKnown RBP17.3■□□□□ 0.36
PTPRO-202ENST00000348962 DSCC1Q9BVC3 393 aa17.3■□□□□ 0.36
PTPRO-202ENST00000348962 CCDC14Q49A88 953 aa17.3■□□□□ 0.36
PTPRO-202ENST00000348962 FNBP4Q8N3X1 1017 aaPredicted RBP17.3■□□□□ 0.36
PTPRO-202ENST00000348962 DNAI1Q9UI46 699 aa17.3■□□□□ 0.36
PTPRO-202ENST00000348962 CNGA4Q8IV77 575 aa17.3■□□□□ 0.36
PTPRO-202ENST00000348962 PPM1EQ8WY54 764 aa17.3■□□□□ 0.36
PTPRO-202ENST00000348962 MAK16Q9BXY0 300 aaKnown RBP17.3■□□□□ 0.36
PTPRO-202ENST00000348962 MTUS1Q9ULD2 1270 aa17.3■□□□□ 0.36
PTPRO-202ENST00000348962 PLEKHG1Q9ULL1 1385 aa17.3■□□□□ 0.36
PTPRO-202ENST00000348962 A0A1B0GVL5 298 aa17.29■□□□□ 0.36
PTPRO-202ENST00000348962 CRKLP46109 303 aaKnown RBP17.29■□□□□ 0.36
PTPRO-202ENST00000348962 PPARAQ07869 468 aa17.29■□□□□ 0.36
PTPRO-202ENST00000348962 TBC1D8BQ0IIM8 1120 aa17.29■□□□□ 0.36
PTPRO-202ENST00000348962 NOC4LQ9BVI4 516 aaKnown RBP17.29■□□□□ 0.36
PTPRO-202ENST00000348962 KCNH3Q9ULD8 1083 aa17.29■□□□□ 0.36
PTPRO-202ENST00000348962 DNMT1P26358 1616 aaKnown RBP17.29■□□□□ 0.36
PTPRO-202ENST00000348962 GYG1P46976 350 aa17.29■□□□□ 0.36
PTPRO-202ENST00000348962 HERC4Q5GLZ8 1057 aaPredicted RBP17.29■□□□□ 0.36
PTPRO-202ENST00000348962 ZNF710Q8N1W2 664 aa17.29■□□□□ 0.36
PTPRO-202ENST00000348962 ATP8A2Q9NTI2 1148 aa17.29■□□□□ 0.36
PTPRO-202ENST00000348962 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.29■□□□□ 0.36
PTPRO-202ENST00000348962 DOK7Q18PE1 504 aa17.29■□□□□ 0.36
PTPRO-202ENST00000348962 OTUD7AQ8TE49 926 aaPredicted RBP17.29■□□□□ 0.36
PTPRO-202ENST00000348962 RNF34Q969K3 372 aa17.29■□□□□ 0.36
PTPRO-202ENST00000348962 CTAGE9A4FU28 777 aa17.29■□□□□ 0.36
PTPRO-202ENST00000348962 NCOA5Q9HCD5 579 aaKnown RBP17.28■□□□□ 0.36
PTPRO-202ENST00000348962 ATP2A2P16615 1042 aaKnown RBP17.28■□□□□ 0.36
PTPRO-202ENST00000348962 RFX1P22670 979 aa17.28■□□□□ 0.36
PTPRO-202ENST00000348962 CALCRLQ16602 461 aa17.28■□□□□ 0.36
PTPRO-202ENST00000348962 RNF216Q9NWF9 866 aaPredicted RBP17.28■□□□□ 0.36
PTPRO-202ENST00000348962 CUTAO60888 179 aa17.28■□□□□ 0.36
PTPRO-202ENST00000348962 CALRP27797 417 aaKnown RBP17.28■□□□□ 0.36
PTPRO-202ENST00000348962 ARHGEF25Q86VW2 580 aa17.28■□□□□ 0.36
PTPRO-202ENST00000348962 WDR70Q9NW82 654 aa17.28■□□□□ 0.36
PTPRO-202ENST00000348962 SNX14Q9Y5W7 946 aa17.28■□□□□ 0.36
PTPRO-202ENST00000348962 FAM169AQ9Y6X4 670 aa17.28■□□□□ 0.36
PTPRO-202ENST00000348962 TCP10L2B9ZVM9 353 aa17.27■□□□□ 0.36
PTPRO-202ENST00000348962 GAS8O95995 478 aa17.27■□□□□ 0.36
PTPRO-202ENST00000348962 OTUD6AQ7L8S5 288 aa17.27■□□□□ 0.36
PTPRO-202ENST00000348962 MLXIPQ9HAP2 919 aa17.27■□□□□ 0.36
PTPRO-202ENST00000348962 KCNQ3O43525 872 aa17.27■□□□□ 0.36
PTPRO-202ENST00000348962 CERKLQ49MI3 558 aaPredicted RBP17.27■□□□□ 0.36
PTPRO-202ENST00000348962 FAM47AQ5JRC9 791 aa17.27■□□□□ 0.36
PTPRO-202ENST00000348962 TNFAIP3P21580 790 aa17.27■□□□□ 0.36
PTPRO-202ENST00000348962 LEO1Q8WVC0 666 aaPredicted RBP17.27■□□□□ 0.36
PTPRO-202ENST00000348962 MYL10Q9BUA6 226 aa17.27■□□□□ 0.36
PTPRO-202ENST00000348962 STMN4Q9H169 189 aaPredicted RBP17.27■□□□□ 0.36
PTPRO-202ENST00000348962 LEMD3Q9Y2U8 911 aa17.27■□□□□ 0.36
PTPRO-202ENST00000348962 MRPL11Q9Y3B7 192 aaKnown RBP17.27■□□□□ 0.36
PTPRO-202ENST00000348962 KDRP35968 1356 aa17.27■□□□□ 0.36
PTPRO-202ENST00000348962 C8orf34Q49A92 452 aa17.27■□□□□ 0.35
PTPRO-202ENST00000348962 NDUFB9Q9Y6M9 179 aa17.27■□□□□ 0.35
PTPRO-202ENST00000348962 XDHP47989 1333 aa17.27■□□□□ 0.35
PTPRO-202ENST00000348962 SCNN1DP51172 638 aa17.26■□□□□ 0.35
PTPRO-202ENST00000348962 CHRNDQ07001 517 aa17.26■□□□□ 0.35
PTPRO-202ENST00000348962 C6orf163Q5TEZ5 329 aa17.26■□□□□ 0.35
PTPRO-202ENST00000348962 ZNF804BA4D1E1 1349 aa17.26■□□□□ 0.35
PTPRO-202ENST00000348962 MAEAQ7L5Y9 396 aa17.26■□□□□ 0.35
PTPRO-202ENST00000348962 IFNKQ9P0W0 207 aa17.26■□□□□ 0.35
PTPRO-202ENST00000348962 FAM47CQ5HY64 1035 aa17.26■□□□□ 0.35
PTPRO-202ENST00000348962 RNF187Q5TA31 235 aaPredicted RBP17.26■□□□□ 0.35
PTPRO-202ENST00000348962 LIN9Q5TKA1 542 aa17.26■□□□□ 0.35
PTPRO-202ENST00000348962 MYCT1Q8N699 235 aa17.26■□□□□ 0.35
PTPRO-202ENST00000348962 RAB3IL1Q8TBN0 382 aa17.26■□□□□ 0.35
PTPRO-202ENST00000348962 GUCA1BQ9UMX6 200 aa17.26■□□□□ 0.35
PTPRO-202ENST00000348962 KIF21AQ7Z4S6 1674 aa17.26■□□□□ 0.35
PTPRO-202ENST00000348962 GAS7O60861 476 aa17.26■□□□□ 0.35
PTPRO-202ENST00000348962 SERPINB2P05120 415 aa17.26■□□□□ 0.35
PTPRO-202ENST00000348962 ALAS1P13196 640 aa17.26■□□□□ 0.35
PTPRO-202ENST00000348962 KRT40Q6A162 431 aa17.26■□□□□ 0.35
PTPRO-202ENST00000348962 CSGALNACT2Q8N6G5 542 aa17.26■□□□□ 0.35
PTPRO-202ENST00000348962 SRRTQ9BXP5 876 aaKnown RBP17.26■□□□□ 0.35
PTPRO-202ENST00000348962 NT5C3AQ9H0P0 336 aa17.26■□□□□ 0.35
PTPRO-202ENST00000348962 CSRNP2Q9H175 543 aa17.26■□□□□ 0.35
PTPRO-202ENST00000348962 WDR17Q8IZU2 1322 aa17.26■□□□□ 0.35
PTPRO-202ENST00000348962 BBOX1O75936 387 aa17.25■□□□□ 0.35
PTPRO-202ENST00000348962 JAKMIP2Q96AA8 810 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms