RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 SMARCC2Q8TAQ2 1214 aa21.9■■□□□ 1.1
PTN-201ENST00000348225 ZDHHC15Q96MV8 337 aa21.9■■□□□ 1.1
PTN-201ENST00000348225 FER1L6Q2WGJ9 1857 aa21.9■■□□□ 1.1
PTN-201ENST00000348225 MYH1P12882 1939 aa21.89■■□□□ 1.1
PTN-201ENST00000348225 YDJCA8MPS7 323 aa21.89■■□□□ 1.09
PTN-201ENST00000348225 GOLGA6L22H0YM25 854 aa21.89■■□□□ 1.09
PTN-201ENST00000348225 PTMSP20962 102 aa21.89■■□□□ 1.09
PTN-201ENST00000348225 NSUN7Q8NE18 718 aaKnown RBP21.89■■□□□ 1.09
PTN-201ENST00000348225 ZNF287Q9HBT7 754 aa21.89■■□□□ 1.09
PTN-201ENST00000348225 ADAMTSL1Q8N6G6 1762 aa21.89■■□□□ 1.09
PTN-201ENST00000348225 SMIM22K7EJ46 135 aa21.88■■□□□ 1.09
PTN-201ENST00000348225 ZBTB43O43298 467 aa21.88■■□□□ 1.09
PTN-201ENST00000348225 BAG4O95429 457 aaKnown RBP21.88■■□□□ 1.09
PTN-201ENST00000348225 IARSP41252 1262 aaKnown RBP21.88■■□□□ 1.09
PTN-201ENST00000348225 LARP1BQ659C4 914 aaKnown RBP21.88■■□□□ 1.09
PTN-201ENST00000348225 APOA5Q6Q788 366 aa21.88■■□□□ 1.09
PTN-201ENST00000348225 NIM1KQ8IY84 436 aa21.88■■□□□ 1.09
PTN-201ENST00000348225 FAM184AQ8NB25 1140 aa21.88■■□□□ 1.09
PTN-201ENST00000348225 TAOK3Q9H2K8 898 aa21.88■■□□□ 1.09
PTN-201ENST00000348225 USP40Q9NVE5 1235 aa21.88■■□□□ 1.09
PTN-201ENST00000348225 SERPINA10Q9UK55 444 aa21.88■■□□□ 1.09
PTN-201ENST00000348225 HPS5Q9UPZ3 1129 aa21.88■■□□□ 1.09
PTN-201ENST00000348225 SLC12A7Q9Y666 1083 aa21.88■■□□□ 1.09
PTN-201ENST00000348225 ECM29Q5VYK3 1845 aa21.88■■□□□ 1.09
PTN-201ENST00000348225 PTPDC1A2A3K4 754 aa21.88■■□□□ 1.09
PTN-201ENST00000348225 JAK2O60674 1132 aa21.88■■□□□ 1.09
PTN-201ENST00000348225 PRDM1O75626 825 aa21.88■■□□□ 1.09
PTN-201ENST00000348225 ZSCAN22P10073 491 aaPredicted RBP21.88■■□□□ 1.09
PTN-201ENST00000348225 METAP2P50579 478 aaKnown RBP eCLIP21.88■■□□□ 1.09
PTN-201ENST00000348225 ZKSCAN3Q9BRR0 538 aa21.88■■□□□ 1.09
PTN-201ENST00000348225 NCOA5Q9HCD5 579 aaKnown RBP21.88■■□□□ 1.09
PTN-201ENST00000348225 SAP30BPQ9UHR5 308 aaKnown RBP21.88■■□□□ 1.09
PTN-201ENST00000348225 TNKSO95271 1327 aa21.87■■□□□ 1.09
PTN-201ENST00000348225 CPLX1O14810 134 aa21.87■■□□□ 1.09
PTN-201ENST00000348225 FOXD4L5Q5VV16 416 aaPredicted RBP21.87■■□□□ 1.09
PTN-201ENST00000348225 FOXD4L4Q8WXT5 416 aaPredicted RBP21.87■■□□□ 1.09
PTN-201ENST00000348225 ZSCAN10Q96SZ4 725 aaPredicted RBP21.87■■□□□ 1.09
PTN-201ENST00000348225 RCAN1P53805 252 aa21.86■■□□□ 1.09
PTN-201ENST00000348225 APOBEC3HQ6NTF7 200 aaKnown RBP21.86■■□□□ 1.09
PTN-201ENST00000348225 RSBN1LQ6PCB5 846 aaPredicted RBP21.86■■□□□ 1.09
PTN-201ENST00000348225 CPLX2Q6PUV4 134 aaKnown RBP21.86■■□□□ 1.09
PTN-201ENST00000348225 MKNK2Q9HBH9 465 aa21.86■■□□□ 1.09
PTN-201ENST00000348225 ZNRF3Q9ULT6 936 aa21.86■■□□□ 1.09
PTN-201ENST00000348225 NID2Q14112 1375 aa21.86■■□□□ 1.09
PTN-201ENST00000348225 TSPY2A6NKD2 308 aa21.85■■□□□ 1.09
PTN-201ENST00000348225 CDKL5O76039 1030 aa21.85■■□□□ 1.09
PTN-201ENST00000348225 CTDNEP1O95476 244 aa21.85■■□□□ 1.09
PTN-201ENST00000348225 RBM5P52756 815 aaKnown RBP eCLIP21.85■■□□□ 1.09
PTN-201ENST00000348225 EVX2Q03828 476 aa21.85■■□□□ 1.09
PTN-201ENST00000348225 SLC4A8Q2Y0W8 1093 aa21.85■■□□□ 1.09
PTN-201ENST00000348225 CDC42EP5Q6NZY7 148 aa21.85■■□□□ 1.09
PTN-201ENST00000348225 MICU3Q86XE3 530 aa21.85■■□□□ 1.09
PTN-201ENST00000348225 SENP2Q9HC62 589 aa21.85■■□□□ 1.09
PTN-201ENST00000348225 SPON1Q9HCB6 807 aa21.85■■□□□ 1.09
PTN-201ENST00000348225 MTMR6Q9Y217 621 aa21.85■■□□□ 1.09
PTN-201ENST00000348225 BCS1LQ9Y276 419 aa21.85■■□□□ 1.09
PTN-201ENST00000348225 ATP6V1DQ9Y5K8 247 aa21.85■■□□□ 1.09
PTN-201ENST00000348225 COL4A5P29400 1685 aa21.85■■□□□ 1.09
PTN-201ENST00000348225 VPS37CA5D8V6 355 aaPredicted RBP21.84■■□□□ 1.09
PTN-201ENST00000348225 GOLGA8AA7E2F4 631 aa21.84■■□□□ 1.09
PTN-201ENST00000348225 WDHD1O75717 1129 aaPredicted RBP21.84■■□□□ 1.09
PTN-201ENST00000348225 PICALMQ13492 652 aa21.84■■□□□ 1.09
PTN-201ENST00000348225 SEC23AQ15436 765 aa21.84■■□□□ 1.09
PTN-201ENST00000348225 TTC6Q86TZ1 520 aa21.84■■□□□ 1.09
PTN-201ENST00000348225 DDX11Q96FC9 970 aa21.84■■□□□ 1.09
PTN-201ENST00000348225 F13A1P00488 732 aa21.84■■□□□ 1.09
PTN-201ENST00000348225 VIL1P09327 827 aaKnown RBP21.84■■□□□ 1.09
PTN-201ENST00000348225 PLCD1P51178 756 aa21.84■■□□□ 1.09
PTN-201ENST00000348225 IFIT1BQ5T764 474 aaKnown RBP21.84■■□□□ 1.09
PTN-201ENST00000348225 C16orf86Q6ZW13 317 aa21.84■■□□□ 1.09
PTN-201ENST00000348225 ENAHQ8N8S7 591 aaPredicted RBP21.84■■□□□ 1.09
PTN-201ENST00000348225 ARFGEF1Q9Y6D6 1849 aa21.83■■□□□ 1.09
PTN-201ENST00000348225 DTNBO60941 627 aa21.83■■□□□ 1.08
PTN-201ENST00000348225 RAD17O75943 681 aa21.83■■□□□ 1.08
PTN-201ENST00000348225 CCDC178Q5BJE1 867 aa21.83■■□□□ 1.08
PTN-201ENST00000348225 RAB11FIP4Q86YS3 637 aa21.83■■□□□ 1.08
PTN-201ENST00000348225 ZNF444Q8N0Y2 327 aaPredicted RBP21.83■■□□□ 1.08
PTN-201ENST00000348225 JDP2Q8WYK2 163 aa21.83■■□□□ 1.08
PTN-201ENST00000348225 DYNLL2Q96FJ2 89 aa21.83■■□□□ 1.08
PTN-201ENST00000348225 HDAC9Q9UKV0 1011 aa21.83■■□□□ 1.08
PTN-201ENST00000348225 LTBP3Q9NS15 1303 aa21.83■■□□□ 1.08
PTN-201ENST00000348225 PSMD14O00487 310 aa21.82■■□□□ 1.08
PTN-201ENST00000348225 CCDC196A0A1B0GTZ2 297 aa21.81■■□□□ 1.08
PTN-201ENST00000348225 H3BQV1 296 aa21.81■■□□□ 1.08
PTN-201ENST00000348225 FAM47AQ5JRC9 791 aa21.81■■□□□ 1.08
PTN-201ENST00000348225 IFFO2Q5TF58 517 aa21.81■■□□□ 1.08
PTN-201ENST00000348225 MCTP1Q6DN14 999 aa21.81■■□□□ 1.08
PTN-201ENST00000348225 ZNF654Q8IZM8 581 aa21.81■■□□□ 1.08
PTN-201ENST00000348225 OSBPL5Q9H0X9 879 aaPredicted RBP21.81■■□□□ 1.08
PTN-201ENST00000348225 NFKBIEO00221 500 aa21.8■■□□□ 1.08
PTN-201ENST00000348225 TFAP4Q01664 338 aa21.8■■□□□ 1.08
PTN-201ENST00000348225 PPP2R5BQ15173 497 aa21.8■■□□□ 1.08
PTN-201ENST00000348225 CFAP100Q494V2 611 aa21.8■■□□□ 1.08
PTN-201ENST00000348225 CATIPQ7Z7H3 387 aa21.8■■□□□ 1.08
PTN-201ENST00000348225 DDX4Q9NQI0 724 aaKnown RBP21.8■■□□□ 1.08
PTN-201ENST00000348225 NPM3O75607 178 aaKnown RBP21.8■■□□□ 1.08
PTN-201ENST00000348225 HLA-DOAP06340 250 aa21.8■■□□□ 1.08
PTN-201ENST00000348225 TSPY3P0CV98 308 aa21.8■■□□□ 1.08
PTN-201ENST00000348225 TSPY8P0CW00 308 aa21.8■■□□□ 1.08
PTN-201ENST00000348225 CALM1P0DP23 149 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms