RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 LDHBP07195 334 aaKnown RBP16.67■□□□□ 0.26
NUP50-201ENST00000347635 MIGA1Q8NAN2 632 aa16.67■□□□□ 0.26
NUP50-201ENST00000347635 RCOR1Q9UKL0 485 aa16.67■□□□□ 0.26
NUP50-201ENST00000347635 TTF2Q9UNY4 1162 aaKnown RBP16.67■□□□□ 0.26
NUP50-201ENST00000347635 CTNND2Q9UQB3 1225 aa16.67■□□□□ 0.26
NUP50-201ENST00000347635 LPIN2Q92539 896 aa16.67■□□□□ 0.26
NUP50-201ENST00000347635 PPP1R13BQ96KQ4 1090 aa16.67■□□□□ 0.26
NUP50-201ENST00000347635 KRBA2Q6ZNG9 492 aa16.67■□□□□ 0.26
NUP50-201ENST00000347635 HELBQ8NG08 1087 aaPredicted RBP16.67■□□□□ 0.26
NUP50-201ENST00000347635 CARMIL3Q8ND23 1372 aa16.67■□□□□ 0.26
NUP50-201ENST00000347635 MAST3O60307 1309 aa16.67■□□□□ 0.26
NUP50-201ENST00000347635 SASH1O94885 1247 aa16.67■□□□□ 0.26
NUP50-201ENST00000347635 CRB1P82279 1406 aa16.67■□□□□ 0.26
NUP50-201ENST00000347635 CCT6AP40227 531 aaKnown RBP16.66■□□□□ 0.26
NUP50-201ENST00000347635 SPECC1LQ69YQ0 1117 aa16.66■□□□□ 0.26
NUP50-201ENST00000347635 MICALCLQ6ZW33 695 aa16.66■□□□□ 0.26
NUP50-201ENST00000347635 NBPF11Q86T75 865 aa16.66■□□□□ 0.26
NUP50-201ENST00000347635 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.66■□□□□ 0.26
NUP50-201ENST00000347635 PCCAP05165 728 aaPredicted RBP16.66■□□□□ 0.26
NUP50-201ENST00000347635 WWC2Q6AWC2 1192 aa16.66■□□□□ 0.26
NUP50-201ENST00000347635 NAPGQ99747 312 aaPredicted RBP16.66■□□□□ 0.26
NUP50-201ENST00000347635 MYL10Q9BUA6 226 aa16.66■□□□□ 0.26
NUP50-201ENST00000347635 IQSEC3Q9UPP2 1182 aaPredicted RBP16.66■□□□□ 0.26
NUP50-201ENST00000347635 C1orf167Q5SNV9 1468 aa16.66■□□□□ 0.26
NUP50-201ENST00000347635 AKR1B10O60218 316 aa16.66■□□□□ 0.26
NUP50-201ENST00000347635 ALDH1B1P30837 517 aa16.66■□□□□ 0.26
NUP50-201ENST00000347635 ETF1P62495 437 aaKnown RBP16.66■□□□□ 0.26
NUP50-201ENST00000347635 RBM28Q9NW13 759 aaKnown RBP16.66■□□□□ 0.26
NUP50-201ENST00000347635 MAP3K15Q6ZN16 1313 aa16.66■□□□□ 0.26
NUP50-201ENST00000347635 HSF2BPO75031 334 aa16.66■□□□□ 0.26
NUP50-201ENST00000347635 HIBADHP31937 336 aaKnown RBP16.66■□□□□ 0.26
NUP50-201ENST00000347635 GGA1Q9UJY5 639 aa16.66■□□□□ 0.26
NUP50-201ENST00000347635 ADGRB2O60241 1585 aa16.65■□□□□ 0.26
NUP50-201ENST00000347635 H0YIN7 160 aa16.65■□□□□ 0.26
NUP50-201ENST00000347635 MCM7P33993 719 aa16.65■□□□□ 0.26
NUP50-201ENST00000347635 TRIM14Q14142 442 aa16.65■□□□□ 0.26
NUP50-201ENST00000347635 FTOQ9C0B1 505 aaKnown RBP eCLIP16.65■□□□□ 0.26
NUP50-201ENST00000347635 SEPT11Q9NVA2 429 aaKnown RBP16.65■□□□□ 0.26
NUP50-201ENST00000347635 PREX1Q8TCU6 1659 aa16.65■□□□□ 0.26
NUP50-201ENST00000347635 DIP2AQ14689 1571 aa16.65■□□□□ 0.26
NUP50-201ENST00000347635 TOB2Q14106 344 aaPredicted RBP16.65■□□□□ 0.26
NUP50-201ENST00000347635 ZBTB38Q8NAP3 1195 aaPredicted RBP16.65■□□□□ 0.26
NUP50-201ENST00000347635 CAPZA3Q96KX2 299 aa16.65■□□□□ 0.26
NUP50-201ENST00000347635 MROH2AA6NES4 1674 aa16.65■□□□□ 0.26
NUP50-201ENST00000347635 VWA3AA6NCI4 1184 aa16.65■□□□□ 0.26
NUP50-201ENST00000347635 CCDC40Q4G0X9 1142 aa16.65■□□□□ 0.26
NUP50-201ENST00000347635 GPR161Q8N6U8 529 aaKnown RBP16.65■□□□□ 0.26
NUP50-201ENST00000347635 LUC7L2Q9Y383 392 aaKnown RBP16.65■□□□□ 0.26
NUP50-201ENST00000347635 ADAMTS13Q76LX8 1427 aa16.65■□□□□ 0.26
NUP50-201ENST00000347635 IDEP14735 1019 aa16.65■□□□□ 0.26
NUP50-201ENST00000347635 ENOX2Q16206 610 aaKnown RBP16.65■□□□□ 0.26
NUP50-201ENST00000347635 ZMYM1Q5SVZ6 1142 aa16.65■□□□□ 0.26
NUP50-201ENST00000347635 COL3A1P02461 1466 aaPredicted RBP16.65■□□□□ 0.26
NUP50-201ENST00000347635 ZMYM6O95789 1325 aa16.65■□□□□ 0.26
NUP50-201ENST00000347635 PRAMEF22A3QJZ6 481 aa16.64■□□□□ 0.26
NUP50-201ENST00000347635 TACC1O75410 805 aa16.64■□□□□ 0.26
NUP50-201ENST00000347635 RXRBP28702 533 aa16.64■□□□□ 0.26
NUP50-201ENST00000347635 OAS2P29728 719 aaKnown RBP16.64■□□□□ 0.26
NUP50-201ENST00000347635 CYP26C1Q6V0L0 522 aa16.64■□□□□ 0.26
NUP50-201ENST00000347635 WDR66Q8TBY9 1149 aa16.64■□□□□ 0.26
NUP50-201ENST00000347635 ARMT1Q9H993 441 aa16.64■□□□□ 0.26
NUP50-201ENST00000347635 PHACTR2O75167 634 aa16.64■□□□□ 0.25
NUP50-201ENST00000347635 ZNF174Q15697 407 aa16.64■□□□□ 0.25
NUP50-201ENST00000347635 EFCAB8A8MWE9 144 aa16.64■□□□□ 0.25
NUP50-201ENST00000347635 CALML3P27482 149 aa16.64■□□□□ 0.25
NUP50-201ENST00000347635 PPP2R2CQ9Y2T4 447 aa16.64■□□□□ 0.25
NUP50-201ENST00000347635 TSPY3P0CV98 308 aa16.64■□□□□ 0.25
NUP50-201ENST00000347635 TSPY8P0CW00 308 aa16.64■□□□□ 0.25
NUP50-201ENST00000347635 PDE6BP35913 854 aa16.64■□□□□ 0.25
NUP50-201ENST00000347635 KIF5AQ12840 1032 aa16.64■□□□□ 0.25
NUP50-201ENST00000347635 DPCR1Q3MIW9 517 aa16.64■□□□□ 0.25
NUP50-201ENST00000347635 VPS36Q86VN1 386 aa16.64■□□□□ 0.25
NUP50-201ENST00000347635 FBXO18Q8NFZ0 1043 aa16.64■□□□□ 0.25
NUP50-201ENST00000347635 POLR3EQ9NVU0 708 aa16.64■□□□□ 0.25
NUP50-201ENST00000347635 SLC4A8Q2Y0W8 1093 aa16.63■□□□□ 0.25
NUP50-201ENST00000347635 TRMT44Q8IYL2 757 aaKnown RBP16.63■□□□□ 0.25
NUP50-201ENST00000347635 CEP170BQ9Y4F5 1589 aaPredicted RBP16.63■□□□□ 0.25
NUP50-201ENST00000347635 ADKP55263 362 aaKnown RBP16.63■□□□□ 0.25
NUP50-201ENST00000347635 PLA2G4DQ86XP0 818 aa16.63■□□□□ 0.25
NUP50-201ENST00000347635 SARM1Q6SZW1 724 aa16.63■□□□□ 0.25
NUP50-201ENST00000347635 ZBTB9Q96C00 473 aa16.63■□□□□ 0.25
NUP50-201ENST00000347635 DRC1Q96MC2 740 aa16.63■□□□□ 0.25
NUP50-201ENST00000347635 CTDSPL2Q05D32 466 aa16.63■□□□□ 0.25
NUP50-201ENST00000347635 A0A087WWV3 80 aa16.63■□□□□ 0.25
NUP50-201ENST00000347635 CTSWP56202 376 aa16.63■□□□□ 0.25
NUP50-201ENST00000347635 NLGN1Q8N2Q7 840 aa16.63■□□□□ 0.25
NUP50-201ENST00000347635 LRRC27Q9C0I9 530 aa16.63■□□□□ 0.25
NUP50-201ENST00000347635 ZNF532Q9HCE3 1301 aa16.62■□□□□ 0.25
NUP50-201ENST00000347635 BICDL2A1A5D9 508 aa16.62■□□□□ 0.25
NUP50-201ENST00000347635 UFL1O94874 794 aa16.62■□□□□ 0.25
NUP50-201ENST00000347635 ASIC1P78348 528 aa16.62■□□□□ 0.25
NUP50-201ENST00000347635 TTLL12Q14166 644 aaPredicted RBP16.62■□□□□ 0.25
NUP50-201ENST00000347635 BBXQ8WY36 941 aaPredicted RBP16.62■□□□□ 0.25
NUP50-201ENST00000347635 SERTAD1Q9UHV2 236 aa16.62■□□□□ 0.25
NUP50-201ENST00000347635 KCNJ14Q9UNX9 436 aa16.62■□□□□ 0.25
NUP50-201ENST00000347635 TECPR2O15040 1411 aa16.62■□□□□ 0.25
NUP50-201ENST00000347635 OPA1O60313 960 aa16.62■□□□□ 0.25
NUP50-201ENST00000347635 HLTFQ14527 1009 aaKnown RBP eCLIP16.62■□□□□ 0.25
NUP50-201ENST00000347635 CCDC122Q5T0U0 273 aa16.62■□□□□ 0.25
NUP50-201ENST00000347635 HEATR3Q7Z4Q2 680 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 208.3 ms