RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 TTLL7Q6ZT98 887 aa17.41■□□□□ 0.38
SRPK1-201ENST00000346162 RTCBQ9Y3I0 505 aaKnown RBP17.41■□□□□ 0.38
SRPK1-201ENST00000346162 TRIM21P19474 475 aaKnown RBP17.4■□□□□ 0.38
SRPK1-201ENST00000346162 VAV2P52735 878 aa17.4■□□□□ 0.38
SRPK1-201ENST00000346162 BIRC2Q13490 618 aa17.4■□□□□ 0.38
SRPK1-201ENST00000346162 LPIN2Q92539 896 aa17.4■□□□□ 0.38
SRPK1-201ENST00000346162 PRM3Q9NNZ6 103 aa17.4■□□□□ 0.38
SRPK1-201ENST00000346162 PCK1P35558 622 aa17.4■□□□□ 0.38
SRPK1-201ENST00000346162 NAPAP54920 295 aa17.4■□□□□ 0.38
SRPK1-201ENST00000346162 RASEFQ8IZ41 740 aa17.4■□□□□ 0.38
SRPK1-201ENST00000346162 E7EWF7 191 aa17.4■□□□□ 0.38
SRPK1-201ENST00000346162 PSMA7O14818 248 aa17.4■□□□□ 0.38
SRPK1-201ENST00000346162 RILPL1Q5EBL4 403 aa17.4■□□□□ 0.38
SRPK1-201ENST00000346162 ZNF804AQ7Z570 1209 aa17.4■□□□□ 0.38
SRPK1-201ENST00000346162 SEC62Q99442 399 aaKnown RBP17.4■□□□□ 0.38
SRPK1-201ENST00000346162 JAG2Q9Y219 1238 aa17.4■□□□□ 0.38
SRPK1-201ENST00000346162 ARHGAP6O43182 974 aa17.39■□□□□ 0.37
SRPK1-201ENST00000346162 STX17P56962 302 aa17.39■□□□□ 0.37
SRPK1-201ENST00000346162 N4BP2L2Q92802 583 aaPredicted RBP17.39■□□□□ 0.37
SRPK1-201ENST00000346162 ANKRD2Q9GZV1 360 aa17.39■□□□□ 0.37
SRPK1-201ENST00000346162 CABP5Q9NP86 173 aa17.39■□□□□ 0.37
SRPK1-201ENST00000346162 COPRSQ9NQ92 184 aa17.39■□□□□ 0.37
SRPK1-201ENST00000346162 EIF3CLB5ME19 914 aaKnown RBP17.39■□□□□ 0.37
SRPK1-201ENST00000346162 F8W031 263 aaPredicted RBP17.39■□□□□ 0.37
SRPK1-201ENST00000346162 TCERG1LQ5VWI1 586 aa17.39■□□□□ 0.37
SRPK1-201ENST00000346162 GDAP1L1Q96MZ0 367 aa17.39■□□□□ 0.37
SRPK1-201ENST00000346162 EIF3CQ99613 913 aaKnown RBP17.39■□□□□ 0.37
SRPK1-201ENST00000346162 DENND2AQ9ULE3 1009 aa17.39■□□□□ 0.37
SRPK1-201ENST00000346162 TRIM66O15016 1216 aa17.39■□□□□ 0.37
SRPK1-201ENST00000346162 KIF1CO43896 1103 aaKnown RBP17.39■□□□□ 0.37
SRPK1-201ENST00000346162 TAF5LO75529 589 aa17.39■□□□□ 0.37
SRPK1-201ENST00000346162 CYLC1P35663 651 aaPredicted RBP17.39■□□□□ 0.37
SRPK1-201ENST00000346162 MYL5Q02045 173 aa17.39■□□□□ 0.37
SRPK1-201ENST00000346162 LRRC27Q9C0I9 530 aa17.39■□□□□ 0.37
SRPK1-201ENST00000346162 LSG1Q9H089 658 aaKnown RBP17.39■□□□□ 0.37
SRPK1-201ENST00000346162 SLAIN2Q9P270 581 aa17.39■□□□□ 0.37
SRPK1-201ENST00000346162 ADAM21Q9UKJ8 722 aa17.39■□□□□ 0.37
SRPK1-201ENST00000346162 TPCN1Q9ULQ1 816 aa17.39■□□□□ 0.37
SRPK1-201ENST00000346162 MTMR6Q9Y217 621 aa17.39■□□□□ 0.37
SRPK1-201ENST00000346162 SLC24A3Q9HC58 644 aa17.39■□□□□ 0.37
SRPK1-201ENST00000346162 MYCNP04198 464 aaPredicted RBP17.38■□□□□ 0.37
SRPK1-201ENST00000346162 NSRP1Q9H0G5 558 aaKnown RBP17.38■□□□□ 0.37
SRPK1-201ENST00000346162 PTCH1Q13635 1447 aa17.38■□□□□ 0.37
SRPK1-201ENST00000346162 FAM71BQ8TC56 605 aa17.38■□□□□ 0.37
SRPK1-201ENST00000346162 LDHBP07195 334 aaKnown RBP17.38■□□□□ 0.37
SRPK1-201ENST00000346162 HPDP32754 393 aaPredicted RBP17.38■□□□□ 0.37
SRPK1-201ENST00000346162 GYS2P54840 703 aa17.38■□□□□ 0.37
SRPK1-201ENST00000346162 GNGT1P63211 74 aa17.38■□□□□ 0.37
SRPK1-201ENST00000346162 LONRF2Q1L5Z9 754 aa17.38■□□□□ 0.37
SRPK1-201ENST00000346162 LMNTD2Q8IXW0 634 aa17.38■□□□□ 0.37
SRPK1-201ENST00000346162 PPP1R12CQ9BZL4 782 aa17.38■□□□□ 0.37
SRPK1-201ENST00000346162 AKR1B10O60218 316 aa17.37■□□□□ 0.37
SRPK1-201ENST00000346162 LACTBP83111 547 aaPredicted RBP17.37■□□□□ 0.37
SRPK1-201ENST00000346162 PPFIA1Q13136 1202 aa17.37■□□□□ 0.37
SRPK1-201ENST00000346162 UBE4AQ14139 1066 aa17.37■□□□□ 0.37
SRPK1-201ENST00000346162 WDR66Q8TBY9 1149 aa17.37■□□□□ 0.37
SRPK1-201ENST00000346162 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.37■□□□□ 0.37
SRPK1-201ENST00000346162 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.37■□□□□ 0.373e-9■■■■□ 23.3
SRPK1-201ENST00000346162 RGS12O14924 1447 aa17.37■□□□□ 0.37
SRPK1-201ENST00000346162 DEXIO95424 95 aa17.37■□□□□ 0.37
SRPK1-201ENST00000346162 ASIC1P78348 528 aa17.37■□□□□ 0.37
SRPK1-201ENST00000346162 IQUBQ8NA54 791 aa17.37■□□□□ 0.37
SRPK1-201ENST00000346162 NAPGQ99747 312 aaPredicted RBP17.37■□□□□ 0.37
SRPK1-201ENST00000346162 CDCA7Q9BWT1 371 aaPredicted RBP17.37■□□□□ 0.37
SRPK1-201ENST00000346162 PLEKHA4Q9H4M7 779 aa17.37■□□□□ 0.37
SRPK1-201ENST00000346162 FAM204AQ9H8W3 233 aa17.37■□□□□ 0.37
SRPK1-201ENST00000346162 MED4Q9NPJ6 270 aa17.37■□□□□ 0.37
SRPK1-201ENST00000346162 RPSAP08865 295 aaKnown RBP17.37■□□□□ 0.37
SRPK1-201ENST00000346162 MCM7P33993 719 aa17.37■□□□□ 0.37
SRPK1-201ENST00000346162 FANCCQ00597 558 aa17.37■□□□□ 0.37
SRPK1-201ENST00000346162 DIS3L2Q8IYB7 885 aaKnown RBP17.37■□□□□ 0.37
SRPK1-201ENST00000346162 HAUS7Q99871 368 aa17.37■□□□□ 0.37
SRPK1-201ENST00000346162 CXorf56Q9H5V9 222 aa17.37■□□□□ 0.37
SRPK1-201ENST00000346162 FAN1Q9Y2M0 1017 aa17.37■□□□□ 0.37
SRPK1-201ENST00000346162 ZNF532Q9HCE3 1301 aa17.37■□□□□ 0.37
SRPK1-201ENST00000346162 PICALMQ13492 652 aa17.37■□□□□ 0.37
SRPK1-201ENST00000346162 C6orf50Q9HD87 102 aa17.37■□□□□ 0.37
SRPK1-201ENST00000346162 ZCCHC17Q9NP64 241 aaKnown RBP17.37■□□□□ 0.37
SRPK1-201ENST00000346162 IFT81Q8WYA0 676 aa17.36■□□□□ 0.37
SRPK1-201ENST00000346162 RNF17Q9BXT8 1623 aaKnown RBP17.36■□□□□ 0.37
SRPK1-201ENST00000346162 UBAP1LF5GYI3 381 aa17.36■□□□□ 0.37
SRPK1-201ENST00000346162 MAP4K1Q92918 833 aa17.36■□□□□ 0.37
SRPK1-201ENST00000346162 KRT86O43790 486 aa17.36■□□□□ 0.37
SRPK1-201ENST00000346162 PRDM1O75626 825 aa17.36■□□□□ 0.37
SRPK1-201ENST00000346162 CYP2C19P33261 490 aa17.36■□□□□ 0.37
SRPK1-201ENST00000346162 ADCK5Q3MIX3 580 aa17.36■□□□□ 0.37
SRPK1-201ENST00000346162 TADA2BQ86TJ2 420 aa17.36■□□□□ 0.37
SRPK1-201ENST00000346162 MRFAP1L1Q96HT8 127 aa17.36■□□□□ 0.37
SRPK1-201ENST00000346162 MYL10Q9BUA6 226 aa17.36■□□□□ 0.37
SRPK1-201ENST00000346162 KCNH3Q9ULD8 1083 aa17.36■□□□□ 0.37
SRPK1-201ENST00000346162 RABGGTAQ92696 567 aa17.36■□□□□ 0.37
SRPK1-201ENST00000346162 PHKBQ93100 1093 aa17.36■□□□□ 0.37
SRPK1-201ENST00000346162 DBNLQ9UJU6 430 aaKnown RBP17.36■□□□□ 0.37
SRPK1-201ENST00000346162 PRAMEF22A3QJZ6 481 aa17.35■□□□□ 0.37
SRPK1-201ENST00000346162 PLCG2P16885 1265 aa17.35■□□□□ 0.37
SRPK1-201ENST00000346162 XPO4Q9C0E2 1151 aaKnown RBP17.35■□□□□ 0.37
SRPK1-201ENST00000346162 GEMIN8Q9NWZ8 242 aaKnown RBP17.35■□□□□ 0.37
SRPK1-201ENST00000346162 CCDC160A6NGH7 325 aa17.35■□□□□ 0.37
SRPK1-201ENST00000346162 SLFN14P0C7P3 912 aa17.35■□□□□ 0.37
SRPK1-201ENST00000346162 CCDC87Q9NVE4 849 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms