RNA–Protein interactions for RNA: ENST00000345519.9

CLTA-202, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-202ENST00000345519 DNAJC18Q9H819 358 aa24.04■■□□□ 1.44
CLTA-202ENST00000345519 TBC1D8O95759 1140 aa24.03■■□□□ 1.44
CLTA-202ENST00000345519 CETPP11597 493 aa24.03■■□□□ 1.44
CLTA-202ENST00000345519 PTPRAP18433 802 aa24.03■■□□□ 1.44
CLTA-202ENST00000345519 SNAPC2Q13487 334 aa24.03■■□□□ 1.44
CLTA-202ENST00000345519 MOGSQ13724 837 aa24.03■■□□□ 1.44
CLTA-202ENST00000345519 UBE3CQ15386 1083 aa24.03■■□□□ 1.44
CLTA-202ENST00000345519 OTUD7BQ6GQQ9 843 aa24.03■■□□□ 1.44
CLTA-202ENST00000345519 MAPKAPK5Q8IW41 473 aa24.03■■□□□ 1.44
CLTA-202ENST00000345519 PI4K2BQ8TCG2 481 aa24.03■■□□□ 1.44
CLTA-202ENST00000345519 GPATCH3Q96I76 525 aa24.03■■□□□ 1.44
CLTA-202ENST00000345519 CCL15-CCL14A0A0B4J2E2 113 aa24.02■■□□□ 1.44
CLTA-202ENST00000345519 CCL15Q16663 113 aa24.02■■□□□ 1.44
CLTA-202ENST00000345519 SMC5Q8IY18 1101 aa24.02■■□□□ 1.44
CLTA-202ENST00000345519 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.02■■□□□ 1.44
CLTA-202ENST00000345519 EHD4Q9H223 541 aa24.02■■□□□ 1.44
CLTA-202ENST00000345519 R3HDMLQ9H3Y0 253 aa24.02■■□□□ 1.44
CLTA-202ENST00000345519 ZSWIM8A7E2V4 1837 aa24.02■■□□□ 1.44
CLTA-202ENST00000345519 GREB1LQ9C091 1923 aaPredicted RBP24.02■■□□□ 1.44
CLTA-202ENST00000345519 MAGEB6P1A0A0J9YX57 407 aa24.01■■□□□ 1.43
CLTA-202ENST00000345519 GPR25O00155 361 aa24.01■■□□□ 1.43
CLTA-202ENST00000345519 CXCL11O14625 94 aa24.01■■□□□ 1.43
CLTA-202ENST00000345519 ZNF296Q8WUU4 475 aaPredicted RBP24.01■■□□□ 1.43
CLTA-202ENST00000345519 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.01■■□□□ 1.43
CLTA-202ENST00000345519 AFG3L2Q9Y4W6 797 aa24.01■■□□□ 1.43
CLTA-202ENST00000345519 SUPT16HQ9Y5B9 1047 aaKnown RBP24.01■■□□□ 1.43
CLTA-202ENST00000345519 RRP1BQ14684 758 aaKnown RBP24■■□□□ 1.43
CLTA-202ENST00000345519 FOXP4Q8IVH2 680 aaPredicted RBP24■■□□□ 1.43
CLTA-202ENST00000345519 FAM43AQ8N2R8 423 aa24■■□□□ 1.43
CLTA-202ENST00000345519 KBTBD3Q8NAB2 608 aa24■■□□□ 1.43
CLTA-202ENST00000345519 EXOC6Q8TAG9 804 aa24■■□□□ 1.43
CLTA-202ENST00000345519 PALD1Q9ULE6 856 aa24■■□□□ 1.43
CLTA-202ENST00000345519 FAM196BA6NMK8 535 aa23.99■■□□□ 1.43
CLTA-202ENST00000345519 CAP2P40123 477 aa23.99■■□□□ 1.43
CLTA-202ENST00000345519 CRHR2Q13324 411 aa23.99■■□□□ 1.43
CLTA-202ENST00000345519 TBC1D2Q9BYX2 928 aa23.99■■□□□ 1.43
CLTA-202ENST00000345519 A0A0G2JLL6 359 aaPredicted RBP23.98■■□□□ 1.43
CLTA-202ENST00000345519 BTBD19C9JJ37 291 aa23.98■■□□□ 1.43
CLTA-202ENST00000345519 MX1P20591 662 aa23.98■■□□□ 1.43
CLTA-202ENST00000345519 PRRT2Q7Z6L0 340 aaPredicted RBP23.98■■□□□ 1.43
CLTA-202ENST00000345519 LCORLQ8N3X6 602 aa23.98■■□□□ 1.43
CLTA-202ENST00000345519 OTUD7AQ8TE49 926 aaPredicted RBP23.98■■□□□ 1.43
CLTA-202ENST00000345519 PICK1Q9NRD5 415 aa23.98■■□□□ 1.43
CLTA-202ENST00000345519 GINM1Q9NU53 330 aa23.98■■□□□ 1.43
CLTA-202ENST00000345519 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.98■■□□□ 1.43
CLTA-202ENST00000345519 TAOK2Q9UL54 1235 aa23.98■■□□□ 1.43
CLTA-202ENST00000345519 GLRX3O76003 335 aaKnown RBP23.97■■□□□ 1.43
CLTA-202ENST00000345519 BRCA2P51587 3418 aa23.97■■□□□ 1.43
CLTA-202ENST00000345519 TSHZ3Q63HK5 1081 aa23.97■■□□□ 1.43
CLTA-202ENST00000345519 ZSCAN25Q6NSZ9 544 aa23.97■■□□□ 1.43
CLTA-202ENST00000345519 TATDN1Q6P1N9 297 aa23.97■■□□□ 1.43
CLTA-202ENST00000345519 RBBP6Q7Z6E9 1792 aaKnown RBP23.97■■□□□ 1.43
CLTA-202ENST00000345519 ANKRD23Q86SG2 305 aa23.97■■□□□ 1.43
CLTA-202ENST00000345519 ADGRA2Q96PE1 1338 aa23.97■■□□□ 1.43
CLTA-202ENST00000345519 CRNKL1Q9BZJ0 848 aaKnown RBP23.97■■□□□ 1.43
CLTA-202ENST00000345519 STAP2Q9UGK3 403 aa23.97■■□□□ 1.43
CLTA-202ENST00000345519 ERC2O15083 957 aa23.96■■□□□ 1.43
CLTA-202ENST00000345519 CHGBP05060 677 aa23.96■■□□□ 1.43
CLTA-202ENST00000345519 HLA-DOAP06340 250 aa23.96■■□□□ 1.43
CLTA-202ENST00000345519 USP5P45974 858 aa23.96■■□□□ 1.43
CLTA-202ENST00000345519 GABPAQ06546 454 aa23.96■■□□□ 1.43
CLTA-202ENST00000345519 BCL11AQ9H165 835 aa23.96■■□□□ 1.43
CLTA-202ENST00000345519 DCP1AQ9NPI6 582 aaPredicted RBP23.96■■□□□ 1.43
CLTA-202ENST00000345519 ZHX2Q9Y6X8 837 aa23.96■■□□□ 1.43
CLTA-202ENST00000345519 FKTNO75072 461 aa23.95■■□□□ 1.42
CLTA-202ENST00000345519 SLFNL1Q499Z3 407 aa23.95■■□□□ 1.42
CLTA-202ENST00000345519 CTU1Q7Z7A3 348 aaKnown RBP23.95■■□□□ 1.42
CLTA-202ENST00000345519 MCOLN1Q9GZU1 580 aa23.95■■□□□ 1.42
CLTA-202ENST00000345519 RWDD1Q9H446 243 aaPredicted RBP23.95■■□□□ 1.42
CLTA-202ENST00000345519 SERPINB13Q9UIV8 391 aa23.95■■□□□ 1.42
CLTA-202ENST00000345519 PARP14Q460N5 1801 aa23.95■■□□□ 1.42
CLTA-202ENST00000345519 GPAT2Q6NUI2 795 aa23.94■■□□□ 1.42
CLTA-202ENST00000345519 ATP8A2Q9NTI2 1148 aa23.94■■□□□ 1.42
CLTA-202ENST00000345519 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.94■■□□□ 1.42
CLTA-202ENST00000345519 SAP30BPQ9UHR5 308 aaKnown RBP23.94■■□□□ 1.42
CLTA-202ENST00000345519 SLC45A1Q9Y2W3 748 aa23.94■■□□□ 1.42
CLTA-202ENST00000345519 MBD4O95243 580 aa23.93■■□□□ 1.42
CLTA-202ENST00000345519 IGHDP01880 384 aa23.93■■□□□ 1.42
CLTA-202ENST00000345519 ZFYP08048 801 aaPredicted RBP23.93■■□□□ 1.42
CLTA-202ENST00000345519 ASNSP08243 561 aa23.93■■□□□ 1.42
CLTA-202ENST00000345519 TAF1CQ15572 869 aaPredicted RBP23.93■■□□□ 1.42
CLTA-202ENST00000345519 ANKRD45Q5TZF3 282 aa23.93■■□□□ 1.42
CLTA-202ENST00000345519 TTC6Q86TZ1 520 aa23.93■■□□□ 1.42
CLTA-202ENST00000345519 SDR42E1Q8WUS8 393 aa23.93■■□□□ 1.42
CLTA-202ENST00000345519 PUS7LQ9H0K6 701 aaKnown RBP23.93■■□□□ 1.42
CLTA-202ENST00000345519 TLR2O60603 784 aa23.92■■□□□ 1.42
CLTA-202ENST00000345519 PLCD1P51178 756 aa23.92■■□□□ 1.42
CLTA-202ENST00000345519 JAG1P78504 1218 aa23.92■■□□□ 1.42
CLTA-202ENST00000345519 FASTKD5Q7L8L6 764 aaKnown RBP23.92■■□□□ 1.42
CLTA-202ENST00000345519 CRACR2BQ8N4Y2 399 aaPredicted RBP23.92■■□□□ 1.42
CLTA-202ENST00000345519 ABHD8Q96I13 439 aa23.92■■□□□ 1.42
CLTA-202ENST00000345519 WDR18Q9BV38 432 aa23.92■■□□□ 1.42
CLTA-202ENST00000345519 ARMT1Q9H993 441 aa23.92■■□□□ 1.42
CLTA-202ENST00000345519 ZFYVE28Q9HCC9 887 aa23.92■■□□□ 1.42
CLTA-202ENST00000345519 PDE1AP54750 535 aa23.91■■□□□ 1.42
CLTA-202ENST00000345519 DGKZQ13574 1117 aa23.91■■□□□ 1.42
CLTA-202ENST00000345519 PKN2Q16513 984 aaKnown RBP23.91■■□□□ 1.42
CLTA-202ENST00000345519 SH3D19Q5HYK7 790 aa23.91■■□□□ 1.42
CLTA-202ENST00000345519 TICAM2Q86XR7 235 aa23.91■■□□□ 1.42
CLTA-202ENST00000345519 PROCA1Q8NCQ7 364 aaPredicted RBP23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms