RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 DHX36Q9H2U1 1008 aaKnown RBP15.2■□□□□ 0.02
SGCA-202ENST00000344627 DDX4Q9NQI0 724 aaKnown RBP15.2■□□□□ 0.02
SGCA-202ENST00000344627 GINM1Q9NU53 330 aa15.2■□□□□ 0.02
SGCA-202ENST00000344627 HERC5Q9UII4 1024 aaKnown RBP15.2■□□□□ 0.02
SGCA-202ENST00000344627 AGTPBP1Q9UPW5 1226 aa15.2■□□□□ 0.02
SGCA-202ENST00000344627 MKI67P46013 3256 aaKnown RBP15.19■□□□□ 0.02
SGCA-202ENST00000344627 DDTLA6NHG4 134 aaPredicted RBP15.19■□□□□ 0.02
SGCA-202ENST00000344627 ECM2O94769 699 aaPredicted RBP15.19■□□□□ 0.02
SGCA-202ENST00000344627 BAG3O95817 575 aa15.19■□□□□ 0.02
SGCA-202ENST00000344627 NAA16Q6N069 864 aaPredicted RBP15.19■□□□□ 0.02
SGCA-202ENST00000344627 CEP85Q6P2H3 762 aa15.19■□□□□ 0.02
SGCA-202ENST00000344627 SH3BP5LQ7L8J4 393 aa15.19■□□□□ 0.02
SGCA-202ENST00000344627 CERS3Q8IU89 383 aa15.19■□□□□ 0.02
SGCA-202ENST00000344627 TEX11Q8IYF3 940 aa15.19■□□□□ 0.02
SGCA-202ENST00000344627 SMCR8Q8TEV9 937 aaPredicted RBP15.19■□□□□ 0.02
SGCA-202ENST00000344627 ZNF384Q8TF68 577 aa15.19■□□□□ 0.02
SGCA-202ENST00000344627 AS3MTQ9HBK9 375 aa15.19■□□□□ 0.02
SGCA-202ENST00000344627 NOP58Q9Y2X3 529 aaKnown RBP15.19■□□□□ 0.02
SGCA-202ENST00000344627 BRCA2P51587 3418 aa15.18■□□□□ 0.02
SGCA-202ENST00000344627 SLURP2P0DP57 97 aa15.18■□□□□ 0.02
SGCA-202ENST00000344627 GCLCP48506 637 aaPredicted RBP15.18■□□□□ 0.02
SGCA-202ENST00000344627 RHBDL3P58872 404 aa15.18■□□□□ 0.02
SGCA-202ENST00000344627 COA7Q96BR5 231 aa15.18■□□□□ 0.02
SGCA-202ENST00000344627 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.18■□□□□ 0.02
SGCA-202ENST00000344627 EXOC6BQ9Y2D4 811 aa15.18■□□□□ 0.02
SGCA-202ENST00000344627 MYO5AQ9Y4I1 1855 aaKnown RBP15.17■□□□□ 0.02
SGCA-202ENST00000344627 APBB1O00213 710 aa15.17■□□□□ 0.02
SGCA-202ENST00000344627 ZAP70P43403 619 aa15.17■□□□□ 0.02
SGCA-202ENST00000344627 FAM110CQ1W6H9 321 aa15.17■□□□□ 0.02
SGCA-202ENST00000344627 GADL1Q6ZQY3 521 aa15.17■□□□□ 0.02
SGCA-202ENST00000344627 ERC1Q8IUD2 1116 aa15.17■□□□□ 0.02
SGCA-202ENST00000344627 ZNF512BQ96KM6 892 aaPredicted RBP15.17■□□□□ 0.02
SGCA-202ENST00000344627 AATFQ9NY61 560 aaKnown RBP eCLIP15.17■□□□□ 0.02
SGCA-202ENST00000344627 PI4KBQ9UBF8 816 aa15.17■□□□□ 0.02
SGCA-202ENST00000344627 BIN2Q9UBW5 565 aaPredicted RBP15.17■□□□□ 0.02
SGCA-202ENST00000344627 COG6Q9Y2V7 657 aa15.17■□□□□ 0.02
SGCA-202ENST00000344627 NR2E3Q9Y5X4 410 aa15.17■□□□□ 0.02
SGCA-202ENST00000344627 TNPO2O14787 897 aaKnown RBP15.16■□□□□ 0.02
SGCA-202ENST00000344627 CYP2E1P05181 493 aaPredicted RBP15.16■□□□□ 0.02
SGCA-202ENST00000344627 CYP2C8P10632 490 aa15.16■□□□□ 0.02
SGCA-202ENST00000344627 CCL5P13501 91 aa15.16■□□□□ 0.02
SGCA-202ENST00000344627 CTGFP29279 349 aa15.16■□□□□ 0.02
SGCA-202ENST00000344627 PRKCZQ05513 592 aa15.16■□□□□ 0.02
SGCA-202ENST00000344627 AACSQ86V21 672 aa15.16■□□□□ 0.02
SGCA-202ENST00000344627 ZNF280CQ8ND82 737 aa15.16■□□□□ 0.02
SGCA-202ENST00000344627 SH3RF3Q8TEJ3 882 aaPredicted RBP15.16■□□□□ 0.02
SGCA-202ENST00000344627 EAF2Q96CJ1 260 aaPredicted RBP15.16■□□□□ 0.02
SGCA-202ENST00000344627 RNF208Q9H0X6 261 aa15.16■□□□□ 0.02
SGCA-202ENST00000344627 TLR7Q9NYK1 1049 aaKnown RBP15.16■□□□□ 0.02
SGCA-202ENST00000344627 DBNLQ9UJU6 430 aaKnown RBP15.16■□□□□ 0.02
SGCA-202ENST00000344627 RCAN3Q9UKA8 241 aa15.16■□□□□ 0.02
SGCA-202ENST00000344627 KIAA0100Q14667 2235 aaKnown RBP15.15■□□□□ 0.02
SGCA-202ENST00000344627 FAM196BA6NMK8 535 aa15.15■□□□□ 0.02
SGCA-202ENST00000344627 USP17L5A8MUK1 530 aa15.15■□□□□ 0.02
SGCA-202ENST00000344627 ADCY3O60266 1144 aa15.15■□□□□ 0.02
SGCA-202ENST00000344627 IDH1O75874 414 aaKnown RBP15.15■□□□□ 0.02
SGCA-202ENST00000344627 PPP4CP60510 307 aa15.15■□□□□ 0.02
SGCA-202ENST00000344627 HSP90AB4PQ58FF6 505 aa15.15■□□□□ 0.02
SGCA-202ENST00000344627 SH3D19Q5HYK7 790 aa15.15■□□□□ 0.02
SGCA-202ENST00000344627 FOXP4Q8IVH2 680 aaPredicted RBP15.15■□□□□ 0.02
SGCA-202ENST00000344627 TGFBRAP1Q8WUH2 860 aa15.15■□□□□ 0.02
SGCA-202ENST00000344627 IL1RAPL2Q9NP60 686 aa15.15■□□□□ 0.02
SGCA-202ENST00000344627 PIH1D3Q9NQM4 214 aaKnown RBP15.15■□□□□ 0.02
SGCA-202ENST00000344627 DDX19BQ9UMR2 479 aa15.15■□□□□ 0.02
SGCA-202ENST00000344627 TRIM75PA6NK02 468 aa15.14■□□□□ 0.01
SGCA-202ENST00000344627 HMMRO75330 724 aa15.14■□□□□ 0.01
SGCA-202ENST00000344627 SGPL1O95470 568 aa15.14■□□□□ 0.01
SGCA-202ENST00000344627 ASNSP08243 561 aa15.14■□□□□ 0.01
SGCA-202ENST00000344627 CYP7A1P22680 504 aa15.14■□□□□ 0.01
SGCA-202ENST00000344627 CAP2P40123 477 aa15.14■□□□□ 0.01
SGCA-202ENST00000344627 FLT3LGP49771 235 aa15.14■□□□□ 0.01
SGCA-202ENST00000344627 MTFR1Q15390 333 aa15.14■□□□□ 0.01
SGCA-202ENST00000344627 UBE2Q1Q7Z7E8 422 aa15.14■□□□□ 0.01
SGCA-202ENST00000344627 GTF3C2Q8WUA4 911 aaPredicted RBP15.14■□□□□ 0.01
SGCA-202ENST00000344627 DPF3Q92784 378 aa15.14■□□□□ 0.01
SGCA-202ENST00000344627 TRIM34Q9BYJ4 488 aa15.14■□□□□ 0.01
SGCA-202ENST00000344627 C19orf81C9J6K1 198 aa15.13■□□□□ 0.01
SGCA-202ENST00000344627 DOCK1Q14185 1865 aa15.13■□□□□ 0.01
SGCA-202ENST00000344627 CCDC84Q86UT8 332 aaPredicted RBP15.13■□□□□ 0.01
SGCA-202ENST00000344627 METTL16Q86W50 562 aaKnown RBP15.13■□□□□ 0.01
SGCA-202ENST00000344627 MAPKAPK5Q8IW41 473 aa15.13■□□□□ 0.01
SGCA-202ENST00000344627 ANKLE1Q8NAG6 615 aa15.13■□□□□ 0.01
SGCA-202ENST00000344627 U2AF1L4Q8WU68 220 aaKnown RBP15.13■□□□□ 0.01
SGCA-202ENST00000344627 SHISA4Q96DD7 197 aa15.13■□□□□ 0.01
SGCA-202ENST00000344627 WDR18Q9BV38 432 aa15.13■□□□□ 0.01
SGCA-202ENST00000344627 CHMP4BQ9H444 224 aaKnown RBP15.13■□□□□ 0.01
SGCA-202ENST00000344627 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.13■□□□□ 0.01
SGCA-202ENST00000344627 NDUFB9Q9Y6M9 179 aa15.13■□□□□ 0.01
SGCA-202ENST00000344627 A0A1W2PPC1 479 aa15.12■□□□□ 0.01
SGCA-202ENST00000344627 MYCP01106 439 aaPredicted RBP15.12■□□□□ 0.01
SGCA-202ENST00000344627 FXR1P51114 621 aaKnown RBP eCLIP15.12■□□□□ 0.01
SGCA-202ENST00000344627 SPP2Q13103 211 aa15.12■□□□□ 0.01
SGCA-202ENST00000344627 RPAP2Q8IXW5 612 aaPredicted RBP15.12■□□□□ 0.01
SGCA-202ENST00000344627 RHPN1Q8TCX5 695 aa15.12■□□□□ 0.01
SGCA-202ENST00000344627 SAP30BPQ9UHR5 308 aaKnown RBP15.12■□□□□ 0.01
SGCA-202ENST00000344627 COLQQ9Y215 455 aaPredicted RBP15.12■□□□□ 0.01
SGCA-202ENST00000344627 H0YGN5 161 aa15.11■□□□□ 0.01
SGCA-202ENST00000344627 IFIT2P09913 472 aaKnown RBP15.11■□□□□ 0.01
SGCA-202ENST00000344627 HOXA7P31268 230 aaPredicted RBP15.11■□□□□ 0.01
SGCA-202ENST00000344627 DYNLL1P63167 89 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms