RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 BTBD19C9JJ37 291 aa19.49■□□□□ 0.71
ATG4B-201ENST00000344376 PDE6AP16499 860 aa19.49■□□□□ 0.71
ATG4B-201ENST00000344376 CRACR2BQ8N4Y2 399 aaPredicted RBP19.49■□□□□ 0.71
ATG4B-201ENST00000344376 HAUS7Q99871 368 aa19.49■□□□□ 0.71
ATG4B-201ENST00000344376 SLURP2P0DP57 97 aa19.48■□□□□ 0.71
ATG4B-201ENST00000344376 ANKRD23Q86SG2 305 aa19.48■□□□□ 0.71
ATG4B-201ENST00000344376 CRBNQ96SW2 442 aa19.48■□□□□ 0.71
ATG4B-201ENST00000344376 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.48■□□□□ 0.712e-6■■□□□ 13.4
ATG4B-201ENST00000344376 PCDHB15Q9Y5E8 787 aa19.48■□□□□ 0.71
ATG4B-201ENST00000344376 MYO5AQ9Y4I1 1855 aaKnown RBP19.47■□□□□ 0.71
ATG4B-201ENST00000344376 MAGEB6P1A0A0J9YX57 407 aa19.47■□□□□ 0.71
ATG4B-201ENST00000344376 SP3Q02447 781 aa19.47■□□□□ 0.71
ATG4B-201ENST00000344376 FOXP4Q8IVH2 680 aaPredicted RBP19.47■□□□□ 0.71
ATG4B-201ENST00000344376 ECHDC1Q9NTX5 307 aa19.47■□□□□ 0.71
ATG4B-201ENST00000344376 SAP30BPQ9UHR5 308 aaKnown RBP19.47■□□□□ 0.71
ATG4B-201ENST00000344376 FASTKD5Q7L8L6 764 aaKnown RBP19.46■□□□□ 0.71
ATG4B-201ENST00000344376 TBC1D2Q9BYX2 928 aa19.46■□□□□ 0.71
ATG4B-201ENST00000344376 PALD1Q9ULE6 856 aa19.46■□□□□ 0.71
ATG4B-201ENST00000344376 ZNF532Q9HCE3 1301 aa19.46■□□□□ 0.71
ATG4B-201ENST00000344376 DOCK1Q14185 1865 aa19.45■□□□□ 0.7
ATG4B-201ENST00000344376 ARHGEF6Q15052 776 aa19.45■□□□□ 0.7
ATG4B-201ENST00000344376 EDC3Q96F86 508 aaKnown RBP19.45■□□□□ 0.7
ATG4B-201ENST00000344376 CRNKL1Q9BZJ0 848 aaKnown RBP19.45■□□□□ 0.7
ATG4B-201ENST00000344376 AFG3L2Q9Y4W6 797 aa19.45■□□□□ 0.7
ATG4B-201ENST00000344376 A0A0G2JLL6 359 aaPredicted RBP19.44■□□□□ 0.7
ATG4B-201ENST00000344376 PDHXO00330 501 aa19.44■□□□□ 0.7
ATG4B-201ENST00000344376 TLR2O60603 784 aa19.44■□□□□ 0.7
ATG4B-201ENST00000344376 CAP2P40123 477 aa19.44■□□□□ 0.7
ATG4B-201ENST00000344376 FBXO46Q6PJ61 603 aaPredicted RBP19.44■□□□□ 0.7
ATG4B-201ENST00000344376 PRRT2Q7Z6L0 340 aaPredicted RBP19.44■□□□□ 0.7
ATG4B-201ENST00000344376 CD99L2Q8TCZ2 262 aa19.44■□□□□ 0.7
ATG4B-201ENST00000344376 RIOK1Q9BRS2 568 aaKnown RBP19.44■□□□□ 0.7
ATG4B-201ENST00000344376 ZBTB47Q9UFB7 747 aaPredicted RBP19.44■□□□□ 0.7
ATG4B-201ENST00000344376 TRIM17Q9Y577 477 aa19.44■□□□□ 0.7
ATG4B-201ENST00000344376 TRIM75PA6NK02 468 aa19.44■□□□□ 0.7
ATG4B-201ENST00000344376 AAMPQ13685 434 aa19.44■□□□□ 0.7
ATG4B-201ENST00000344376 ZSCAN25Q6NSZ9 544 aa19.44■□□□□ 0.7
ATG4B-201ENST00000344376 METTL16Q86W50 562 aaKnown RBP19.44■□□□□ 0.7
ATG4B-201ENST00000344376 PARK7Q99497 189 aaKnown RBP19.44■□□□□ 0.7
ATG4B-201ENST00000344376 FOCADQ5VW36 1801 aa19.43■□□□□ 0.7
ATG4B-201ENST00000344376 GADL1Q6ZQY3 521 aa19.43■□□□□ 0.7
ATG4B-201ENST00000344376 TTC6Q86TZ1 520 aa19.43■□□□□ 0.7
ATG4B-201ENST00000344376 AS3MTQ9HBK9 375 aa19.43■□□□□ 0.7
ATG4B-201ENST00000344376 TCRBV5S4A2TA0A5A2 114 aa19.42■□□□□ 0.7
ATG4B-201ENST00000344376 ASNSP08243 561 aa19.42■□□□□ 0.7
ATG4B-201ENST00000344376 ADD2P35612 726 aa19.42■□□□□ 0.7
ATG4B-201ENST00000344376 MOGSQ13724 837 aa19.42■□□□□ 0.7
ATG4B-201ENST00000344376 KIF22Q14807 665 aa19.42■□□□□ 0.7
ATG4B-201ENST00000344376 SLC4A8Q2Y0W8 1093 aa19.42■□□□□ 0.7
ATG4B-201ENST00000344376 OTOP1Q7RTM1 612 aa19.42■□□□□ 0.7
ATG4B-201ENST00000344376 EFCC1Q9HA90 598 aa19.42■□□□□ 0.7
ATG4B-201ENST00000344376 GINM1Q9NU53 330 aa19.42■□□□□ 0.7
ATG4B-201ENST00000344376 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.42■□□□□ 0.7
ATG4B-201ENST00000344376 HPS5Q9UPZ3 1129 aa19.42■□□□□ 0.7
ATG4B-201ENST00000344376 USP17L5A8MUK1 530 aa19.41■□□□□ 0.7
ATG4B-201ENST00000344376 CCDC84Q86UT8 332 aaPredicted RBP19.41■□□□□ 0.7
ATG4B-201ENST00000344376 ZNF280CQ8ND82 737 aa19.41■□□□□ 0.7
ATG4B-201ENST00000344376 EHD4Q9H223 541 aa19.41■□□□□ 0.7
ATG4B-201ENST00000344376 DNAJC18Q9H819 358 aa19.41■□□□□ 0.7
ATG4B-201ENST00000344376 SERPINB13Q9UIV8 391 aa19.41■□□□□ 0.7
ATG4B-201ENST00000344376 CDK5RAP2Q96SN8 1893 aa19.41■□□□□ 0.7
ATG4B-201ENST00000344376 POLR3DP05423 398 aaPredicted RBP19.4■□□□□ 0.7
ATG4B-201ENST00000344376 SLC45A1Q9Y2W3 748 aa19.4■□□□□ 0.7
ATG4B-201ENST00000344376 ERC2O15083 957 aa19.4■□□□□ 0.7
ATG4B-201ENST00000344376 SPP2Q13103 211 aa19.4■□□□□ 0.7
ATG4B-201ENST00000344376 RRP1BQ14684 758 aaKnown RBP19.4■□□□□ 0.7
ATG4B-201ENST00000344376 UBE3CQ15386 1083 aa19.4■□□□□ 0.7
ATG4B-201ENST00000344376 GPAT2Q6NUI2 795 aa19.4■□□□□ 0.7
ATG4B-201ENST00000344376 LCORLQ8N3X6 602 aa19.4■□□□□ 0.7
ATG4B-201ENST00000344376 TTC41PQ6P2S7 1318 aa19.39■□□□□ 0.69
ATG4B-201ENST00000344376 MBD4O95243 580 aa19.39■□□□□ 0.69
ATG4B-201ENST00000344376 PROCA1Q8NCQ7 364 aaPredicted RBP19.39■□□□□ 0.69
ATG4B-201ENST00000344376 ARMT1Q9H993 441 aa19.39■□□□□ 0.69
ATG4B-201ENST00000344376 MCM9Q9NXL9 1143 aa19.39■□□□□ 0.69
ATG4B-201ENST00000344376 CPA4Q9UI42 421 aa19.39■□□□□ 0.69
ATG4B-201ENST00000344376 AGTPBP1Q9UPW5 1226 aa19.39■□□□□ 0.69
ATG4B-201ENST00000344376 SIPA1L1O43166 1804 aa19.39■□□□□ 0.69
ATG4B-201ENST00000344376 GDF11O95390 407 aa19.38■□□□□ 0.69
ATG4B-201ENST00000344376 HDAC1Q13547 482 aaPredicted RBP19.38■□□□□ 0.69
ATG4B-201ENST00000344376 C17orf99Q6UX52 265 aa19.38■□□□□ 0.69
ATG4B-201ENST00000344376 GCC1Q96CN9 775 aa19.38■□□□□ 0.69
ATG4B-201ENST00000344376 DDRGK1Q96HY6 314 aa19.38■□□□□ 0.69
ATG4B-201ENST00000344376 ZBTB21Q9ULJ3 1066 aa19.38■□□□□ 0.69
ATG4B-201ENST00000344376 LACTBP83111 547 aaPredicted RBP19.37■□□□□ 0.69
ATG4B-201ENST00000344376 PABPC4Q13310 644 aaKnown RBP eCLIP19.37■□□□□ 0.69
ATG4B-201ENST00000344376 TSHZ3Q63HK5 1081 aa19.37■□□□□ 0.69
ATG4B-201ENST00000344376 KBTBD3Q8NAB2 608 aa19.37■□□□□ 0.69
ATG4B-201ENST00000344376 SDR42E1Q8WUS8 393 aa19.37■□□□□ 0.69
ATG4B-201ENST00000344376 WDR18Q9BV38 432 aa19.37■□□□□ 0.69
ATG4B-201ENST00000344376 PNMA3Q9UL41 463 aa19.37■□□□□ 0.69
ATG4B-201ENST00000344376 ADGRA2Q96PE1 1338 aa19.37■□□□□ 0.69
ATG4B-201ENST00000344376 CYP2C8P10632 490 aa19.36■□□□□ 0.69
ATG4B-201ENST00000344376 HMGCS2P54868 508 aa19.36■□□□□ 0.69
ATG4B-201ENST00000344376 LRRFIP1Q32MZ4 808 aaKnown RBP19.36■□□□□ 0.69
ATG4B-201ENST00000344376 TATDN1Q6P1N9 297 aa19.36■□□□□ 0.69
ATG4B-201ENST00000344376 AMOTL1Q8IY63 956 aa19.36■□□□□ 0.69
ATG4B-201ENST00000344376 SMCR8Q8TEV9 937 aaPredicted RBP19.36■□□□□ 0.69
ATG4B-201ENST00000344376 DCP1AQ9NPI6 582 aaPredicted RBP19.36■□□□□ 0.69
ATG4B-201ENST00000344376 ATP8A2Q9NTI2 1148 aa19.36■□□□□ 0.69
ATG4B-201ENST00000344376 PTPN22Q9Y2R2 807 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms