RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 GNL3LQ9NVN8 582 aaKnown RBP8.89□□□□□ -0.99
ZNF540-202ENST00000343599 TRPA1O75762 1119 aa8.89□□□□□ -0.99
ZNF540-202ENST00000343599 GLRX3O76003 335 aaKnown RBP8.89□□□□□ -0.99
ZNF540-202ENST00000343599 FAM9BQ8IZU0 186 aa8.89□□□□□ -0.99
ZNF540-202ENST00000343599 COPRSQ9NQ92 184 aa8.89□□□□□ -0.99
ZNF540-202ENST00000343599 NSFL1CQ9UNZ2 370 aaKnown RBP8.89□□□□□ -0.99
ZNF540-202ENST00000343599 VGLL3A8MV65 326 aa8.88□□□□□ -0.99
ZNF540-202ENST00000343599 ATP2A1O14983 1001 aa8.88□□□□□ -0.99
ZNF540-202ENST00000343599 STRNO43815 780 aa8.88□□□□□ -0.99
ZNF540-202ENST00000343599 ARID4AP29374 1257 aaPredicted RBP8.88□□□□□ -0.99
ZNF540-202ENST00000343599 GRK4P32298 578 aa8.88□□□□□ -0.99
ZNF540-202ENST00000343599 MROH7Q68CQ1 1323 aa8.88□□□□□ -0.99
ZNF540-202ENST00000343599 NECAB2Q7Z6G3 386 aa8.88□□□□□ -0.99
ZNF540-202ENST00000343599 UPF3AQ9H1J1 476 aaKnown RBP8.88□□□□□ -0.99
ZNF540-202ENST00000343599 PRKRIP1Q9H875 184 aaPredicted RBP8.88□□□□□ -0.99
ZNF540-202ENST00000343599 PLIN4Q96Q06 1357 aa8.88□□□□□ -0.99
ZNF540-202ENST00000343599 GPR75-ASB3A0A0A6YYF3 556 aa8.88□□□□□ -0.99
ZNF540-202ENST00000343599 E9PSI1 815 aa8.88□□□□□ -0.99
ZNF540-202ENST00000343599 HIBADHP31937 336 aaKnown RBP8.88□□□□□ -0.99
ZNF540-202ENST00000343599 CRKP46108 304 aa8.88□□□□□ -0.99
ZNF540-202ENST00000343599 SLC20A2Q08357 652 aa8.88□□□□□ -0.99
ZNF540-202ENST00000343599 IFIT5Q13325 482 aaKnown RBP8.88□□□□□ -0.99
ZNF540-202ENST00000343599 PROSER3Q2NL68 480 aa8.88□□□□□ -0.99
ZNF540-202ENST00000343599 TBC1D10BQ4KMP7 808 aaPredicted RBP8.88□□□□□ -0.99
ZNF540-202ENST00000343599 DZIP1LQ8IYY4 767 aaKnown RBP8.88□□□□□ -0.99
ZNF540-202ENST00000343599 RSPH1Q8WYR4 309 aa8.88□□□□□ -0.99
ZNF540-202ENST00000343599 OPTNQ96CV9 577 aa8.88□□□□□ -0.99
ZNF540-202ENST00000343599 PTPN18Q99952 460 aa8.88□□□□□ -0.99
ZNF540-202ENST00000343599 FAM13BQ9NYF5 915 aa8.88□□□□□ -0.99
ZNF540-202ENST00000343599 ANKIB1Q9P2G1 1089 aa8.88□□□□□ -0.99
ZNF540-202ENST00000343599 SIP14410 1827 aa8.88□□□□□ -0.99
ZNF540-202ENST00000343599 DNM1LO00429 736 aa8.87□□□□□ -0.99
ZNF540-202ENST00000343599 RBL2Q08999 1139 aa8.87□□□□□ -0.99
ZNF540-202ENST00000343599 POLA2Q14181 598 aa8.87□□□□□ -0.99
ZNF540-202ENST00000343599 SLC9C1Q4G0N8 1177 aa8.87□□□□□ -0.99
ZNF540-202ENST00000343599 FOXP4Q8IVH2 680 aaPredicted RBP8.87□□□□□ -0.99
ZNF540-202ENST00000343599 ATXN2LQ8WWM7 1075 aaKnown RBP8.87□□□□□ -0.99
ZNF540-202ENST00000343599 KIAA0355O15063 1070 aa8.87□□□□□ -0.99
ZNF540-202ENST00000343599 MRS2Q9HD23 443 aa8.87□□□□□ -0.99
ZNF540-202ENST00000343599 AKAP2Q9Y2D5 859 aa8.87□□□□□ -0.99
ZNF540-202ENST00000343599 COL4A4P53420 1690 aaPredicted RBP8.87□□□□□ -0.99
ZNF540-202ENST00000343599 A0A1B0GUL7 405 aa8.86□□□□□ -0.99
ZNF540-202ENST00000343599 GRM8O00222 908 aa8.86□□□□□ -0.99
ZNF540-202ENST00000343599 DYNC1I1O14576 645 aa8.86□□□□□ -0.99
ZNF540-202ENST00000343599 USP14P54578 494 aa8.86□□□□□ -0.99
ZNF540-202ENST00000343599 RRP1P56182 461 aaKnown RBP8.86□□□□□ -0.99
ZNF540-202ENST00000343599 EXOC6Q8TAG9 804 aa8.86□□□□□ -0.99
ZNF540-202ENST00000343599 PRRX2Q99811 253 aa8.86□□□□□ -0.99
ZNF540-202ENST00000343599 MROH7-TTC4A0A0A0MT08 1334 aa8.86□□□□□ -0.99
ZNF540-202ENST00000343599 G3V3G9 751 aa8.86□□□□□ -0.99
ZNF540-202ENST00000343599 KDM4AO75164 1064 aa8.86□□□□□ -0.99
ZNF540-202ENST00000343599 ITGA6P23229 1130 aa8.86□□□□□ -0.99
ZNF540-202ENST00000343599 CAVIN4Q5BKX8 364 aa8.86□□□□□ -0.99
ZNF540-202ENST00000343599 DCAF8Q5TAQ9 597 aa8.86□□□□□ -0.99
ZNF540-202ENST00000343599 GJD2Q9UKL4 321 aa8.86□□□□□ -0.99
ZNF540-202ENST00000343599 PHF24Q9UPV7 400 aa8.86□□□□□ -0.99
ZNF540-202ENST00000343599 CCL15-CCL14A0A0B4J2E2 113 aa8.86□□□□□ -0.99
ZNF540-202ENST00000343599 PDE8BO95263 885 aa8.86□□□□□ -0.99
ZNF540-202ENST00000343599 WDR43Q15061 677 aaKnown RBP eCLIP8.86□□□□□ -0.99
ZNF540-202ENST00000343599 CCL15Q16663 113 aa8.86□□□□□ -0.99
ZNF540-202ENST00000343599 CERS5Q8N5B7 392 aa8.86□□□□□ -0.99
ZNF540-202ENST00000343599 C11orf49Q9H6J7 331 aa8.86□□□□□ -0.99
ZNF540-202ENST00000343599 TRIM17Q9Y577 477 aa8.86□□□□□ -0.99
ZNF540-202ENST00000343599 KIAA1671Q9BY89 1806 aa8.86□□□□□ -0.99
ZNF540-202ENST00000343599 UQCRFS1P1P0C7P4 283 aa8.85□□□□□ -0.99
ZNF540-202ENST00000343599 CCL5P13501 91 aa8.85□□□□□ -0.99
ZNF540-202ENST00000343599 OAZ1P54368 228 aa8.85□□□□□ -0.99
ZNF540-202ENST00000343599 IRX3P78415 501 aaPredicted RBP8.85□□□□□ -0.99
ZNF540-202ENST00000343599 C8orf34Q49A92 452 aa8.85□□□□□ -0.99
ZNF540-202ENST00000343599 CC2D1BQ5T0F9 858 aaKnown RBP8.85□□□□□ -0.99
ZNF540-202ENST00000343599 APOBEC3HQ6NTF7 200 aaKnown RBP8.85□□□□□ -0.99
ZNF540-202ENST00000343599 CCDC129Q6ZRS4 1044 aa8.85□□□□□ -0.99
ZNF540-202ENST00000343599 MPHOSPH8Q99549 860 aa8.85□□□□□ -0.99
ZNF540-202ENST00000343599 IRF2BPLQ9H1B7 796 aa8.85□□□□□ -0.99
ZNF540-202ENST00000343599 ANTXR1Q9H6X2 564 aa8.85□□□□□ -0.99
ZNF540-202ENST00000343599 GRPEL1Q9HAV7 217 aa8.85□□□□□ -0.99
ZNF540-202ENST00000343599 ADAMTS5Q9UNA0 930 aa8.85□□□□□ -0.99
ZNF540-202ENST00000343599 VAMP4O75379 141 aa8.85□□□□□ -0.99
ZNF540-202ENST00000343599 FARP2O94887 1054 aaPredicted RBP8.85□□□□□ -0.99
ZNF540-202ENST00000343599 RFX5P48382 616 aaPredicted RBP8.85□□□□□ -0.99
ZNF540-202ENST00000343599 VGLL4Q14135 290 aa8.85□□□□□ -0.99
ZNF540-202ENST00000343599 TDHQ8IZJ6 230 aa8.85□□□□□ -0.99
ZNF540-202ENST00000343599 TRIM44Q96DX7 344 aaPredicted RBP8.85□□□□□ -0.99
ZNF540-202ENST00000343599 APBA2Q99767 749 aa8.85□□□□□ -0.99
ZNF540-202ENST00000343599 DBNDD1Q9H9R9 158 aa8.85□□□□□ -0.99
ZNF540-202ENST00000343599 SLC5A4Q9NY91 659 aa8.85□□□□□ -0.99
ZNF540-202ENST00000343599 ANGEL1Q9UNK9 670 aaKnown RBP8.85□□□□□ -0.99
ZNF540-202ENST00000343599 MAP3K2Q9Y2U5 619 aa8.85□□□□□ -0.99
ZNF540-202ENST00000343599 ZMYND10O75800 440 aa8.84□□□□□ -0.99
ZNF540-202ENST00000343599 IFIT1P09914 478 aaKnown RBP8.84□□□□□ -0.99
ZNF540-202ENST00000343599 HCLS1P14317 486 aaPredicted RBP8.84□□□□□ -0.99
ZNF540-202ENST00000343599 IL15P40933 162 aaPredicted RBP8.84□□□□□ -0.99
ZNF540-202ENST00000343599 COL19A1Q14993 1142 aa8.84□□□□□ -0.99
ZNF540-202ENST00000343599 TAF1CQ15572 869 aaPredicted RBP8.84□□□□□ -0.99
ZNF540-202ENST00000343599 FBXW7Q969H0 707 aa8.84□□□□□ -0.99
ZNF540-202ENST00000343599 COA7Q96BR5 231 aa8.84□□□□□ -0.99
ZNF540-202ENST00000343599 FAM84BQ96KN1 310 aaPredicted RBP8.84□□□□□ -0.99
ZNF540-202ENST00000343599 RABGAP1Q9Y3P9 1069 aa8.84□□□□□ -0.99
ZNF540-202ENST00000343599 BTBD19C9JJ37 291 aa8.84□□□□□ -0.99
ZNF540-202ENST00000343599 SLC5A1P13866 664 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms