RNA–Protein interactions for RNA: ENST00000343253.11

CCDC18-201, Transcript of coiled-coil domain containing 18, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC18, Length 4,867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-201ENST00000343253 SOS1Q07889 1333 aaPredicted RBP12.05□□□□□ -0.48
CCDC18-201ENST00000343253 RNF113AO15541 343 aaKnown RBP12.05□□□□□ -0.48
CCDC18-201ENST00000343253 BRD1O95696 1058 aa12.05□□□□□ -0.48
CCDC18-201ENST00000343253 NAA16Q6N069 864 aaPredicted RBP12.05□□□□□ -0.48
CCDC18-201ENST00000343253 CCDC105Q8IYK2 499 aa12.05□□□□□ -0.48
CCDC18-201ENST00000343253 OR8K1Q8NGG5 319 aa12.05□□□□□ -0.48
CCDC18-201ENST00000343253 RILPQ96NA2 401 aa12.05□□□□□ -0.48
CCDC18-201ENST00000343253 ANKRD36BQ8N2N9 1353 aa12.05□□□□□ -0.48
CCDC18-201ENST00000343253 CCDC169A6NNP5 214 aa12.05□□□□□ -0.48
CCDC18-201ENST00000343253 RPS6KB1P23443 525 aa12.05□□□□□ -0.48
CCDC18-201ENST00000343253 ATP2A3Q93084 1043 aa12.05□□□□□ -0.48
CCDC18-201ENST00000343253 IFIH1Q9BYX4 1025 aaKnown RBP12.05□□□□□ -0.48
CCDC18-201ENST00000343253 ZBTB3Q9H5J0 574 aa12.05□□□□□ -0.48
CCDC18-201ENST00000343253 STX10O60499 249 aa12.05□□□□□ -0.48
CCDC18-201ENST00000343253 SUN1O94901 812 aa12.05□□□□□ -0.48
CCDC18-201ENST00000343253 LIN9Q5TKA1 542 aa12.05□□□□□ -0.48
CCDC18-201ENST00000343253 AGTPBP1Q9UPW5 1226 aa12.05□□□□□ -0.48
CCDC18-201ENST00000343253 HYOU1Q9Y4L1 999 aa12.05□□□□□ -0.48
CCDC18-201ENST00000343253 DNMBPQ6XZF7 1577 aa12.04□□□□□ -0.48
CCDC18-201ENST00000343253 IRX5P78411 483 aaPredicted RBP12.04□□□□□ -0.48
CCDC18-201ENST00000343253 CRCPO75575 148 aa12.04□□□□□ -0.48
CCDC18-201ENST00000343253 SLMAPQ14BN4 828 aa12.04□□□□□ -0.48
CCDC18-201ENST00000343253 CFAP61Q8NHU2 1237 aa12.04□□□□□ -0.48
CCDC18-201ENST00000343253 DISP3Q9P2K9 1392 aa12.04□□□□□ -0.48
CCDC18-201ENST00000343253 KDM2BQ8NHM5 1336 aa12.04□□□□□ -0.48
CCDC18-201ENST00000343253 ATP5J2-PTCD1G3V325 749 aa12.04□□□□□ -0.48
CCDC18-201ENST00000343253 ZNF354CQ86Y25 554 aa12.04□□□□□ -0.48
CCDC18-201ENST00000343253 RRP36Q96EU6 259 aaKnown RBP12.04□□□□□ -0.48
CCDC18-201ENST00000343253 GDAP1L1Q96MZ0 367 aa12.04□□□□□ -0.48
CCDC18-201ENST00000343253 POLR2DO15514 142 aaKnown RBP12.04□□□□□ -0.48
CCDC18-201ENST00000343253 ATP1A2P50993 1020 aa12.04□□□□□ -0.48
CCDC18-201ENST00000343253 SATB1Q01826 763 aa12.04□□□□□ -0.48
CCDC18-201ENST00000343253 KLHL30Q0D2K2 578 aa12.04□□□□□ -0.48
CCDC18-201ENST00000343253 PPP1R21Q6ZMI0 780 aa12.04□□□□□ -0.48
CCDC18-201ENST00000343253 MPHOSPH6Q99547 160 aaKnown RBP12.04□□□□□ -0.48
CCDC18-201ENST00000343253 PDE11AQ9HCR9 933 aa12.04□□□□□ -0.48
CCDC18-201ENST00000343253 ARHGAP42A6NI28 874 aa12.03□□□□□ -0.48
CCDC18-201ENST00000343253 SPDYE3A6NKU9 549 aa12.03□□□□□ -0.48
CCDC18-201ENST00000343253 CCDC197Q8NCU1 140 aa12.03□□□□□ -0.48
CCDC18-201ENST00000343253 LINS1Q8NG48 757 aa12.03□□□□□ -0.48
CCDC18-201ENST00000343253 TMEM87BQ96K49 555 aa12.03□□□□□ -0.48
CCDC18-201ENST00000343253 CTTNBP2NLQ9P2B4 639 aa12.03□□□□□ -0.48
CCDC18-201ENST00000343253 ZPR1O75312 459 aa12.03□□□□□ -0.48
CCDC18-201ENST00000343253 DEXIO95424 95 aa12.03□□□□□ -0.48
CCDC18-201ENST00000343253 RNASELQ05823 741 aaKnown RBP12.03□□□□□ -0.48
CCDC18-201ENST00000343253 ANKRD42Q8N9B4 389 aa12.03□□□□□ -0.48
CCDC18-201ENST00000343253 SNRPA1P09661 255 aaKnown RBP12.03□□□□□ -0.48
CCDC18-201ENST00000343253 CNGA1P29973 690 aa12.03□□□□□ -0.48
CCDC18-201ENST00000343253 TNNI2P48788 182 aa12.03□□□□□ -0.48
CCDC18-201ENST00000343253 ARHGAP4P98171 946 aa12.03□□□□□ -0.48
CCDC18-201ENST00000343253 ICE2Q659A1 982 aa12.03□□□□□ -0.48
CCDC18-201ENST00000343253 MCTP2Q6DN12 878 aa12.03□□□□□ -0.48
CCDC18-201ENST00000343253 LRRC8AQ8IWT6 810 aa12.03□□□□□ -0.48
CCDC18-201ENST00000343253 PPP2R2CQ9Y2T4 447 aa12.03□□□□□ -0.48
CCDC18-201ENST00000343253 CCDC151A5D8V7 595 aa12.03□□□□□ -0.48
CCDC18-201ENST00000343253 GADD45BO75293 160 aaPredicted RBP12.03□□□□□ -0.48
CCDC18-201ENST00000343253 BAG2O95816 211 aa12.03□□□□□ -0.48
CCDC18-201ENST00000343253 KSR2Q6VAB6 950 aa12.03□□□□□ -0.48
CCDC18-201ENST00000343253 SRGAP1Q7Z6B7 1085 aa12.03□□□□□ -0.48
CCDC18-201ENST00000343253 MRRFQ96E11 262 aaKnown RBP12.03□□□□□ -0.48
CCDC18-201ENST00000343253 PSMB7Q99436 277 aa12.03□□□□□ -0.48
CCDC18-201ENST00000343253 ACTR5Q9H9F9 607 aaPredicted RBP12.03□□□□□ -0.48
CCDC18-201ENST00000343253 NUTM2BA6NNL0 878 aaPredicted RBP12.02□□□□□ -0.48
CCDC18-201ENST00000343253 NUTM2EB1AL46 878 aaPredicted RBP12.02□□□□□ -0.48
CCDC18-201ENST00000343253 SPECC1L-ADORA2AF8WAN1 911 aa12.02□□□□□ -0.48
CCDC18-201ENST00000343253 PPM1FP49593 454 aaPredicted RBP12.02□□□□□ -0.48
CCDC18-201ENST00000343253 POSTNQ15063 836 aa12.02□□□□□ -0.48
CCDC18-201ENST00000343253 WDR44Q5JSH3 913 aa12.02□□□□□ -0.48
CCDC18-201ENST00000343253 XAB2Q9HCS7 855 aaKnown RBP12.02□□□□□ -0.48
CCDC18-201ENST00000343253 TAB2Q9NYJ8 693 aa12.02□□□□□ -0.48
CCDC18-201ENST00000343253 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.02□□□□□ -0.48
CCDC18-201ENST00000343253 SCAF11Q99590 1463 aaKnown RBP12.02□□□□□ -0.48
CCDC18-201ENST00000343253 TTC16Q8NEE8 873 aa12.02□□□□□ -0.49
CCDC18-201ENST00000343253 FBXO41Q8TF61 875 aa12.02□□□□□ -0.49
CCDC18-201ENST00000343253 SCOCQ9UIL1 159 aa12.02□□□□□ -0.49
CCDC18-201ENST00000343253 CDC23Q9UJX2 597 aa12.02□□□□□ -0.49
CCDC18-201ENST00000343253 AOX1Q06278 1338 aa12.02□□□□□ -0.49
CCDC18-201ENST00000343253 ARHGEF11O15085 1522 aa12.02□□□□□ -0.49
CCDC18-201ENST00000343253 SH3BP5O60239 455 aa12.02□□□□□ -0.49
CCDC18-201ENST00000343253 BEND3Q5T5X7 828 aa12.02□□□□□ -0.49
CCDC18-201ENST00000343253 FAM173BQ6P4H8 233 aa12.02□□□□□ -0.49
CCDC18-201ENST00000343253 FAM83GA6ND36 823 aa12.02□□□□□ -0.49
CCDC18-201ENST00000343253 RPSAP08865 295 aaKnown RBP12.02□□□□□ -0.49
CCDC18-201ENST00000343253 IFT88Q13099 833 aa12.02□□□□□ -0.49
CCDC18-201ENST00000343253 KIFC2Q96AC6 838 aa12.02□□□□□ -0.49
CCDC18-201ENST00000343253 HELLSQ9NRZ9 838 aa12.02□□□□□ -0.49
CCDC18-201ENST00000343253 KIAA1468Q9P260 1216 aa12.02□□□□□ -0.49
CCDC18-201ENST00000343253 STK10O94804 968 aaKnown RBP12.01□□□□□ -0.49
CCDC18-201ENST00000343253 SKIP12755 728 aa12.01□□□□□ -0.49
CCDC18-201ENST00000343253 CCDC93Q567U6 631 aa12.01□□□□□ -0.49
CCDC18-201ENST00000343253 LMBR1LQ6UX01 489 aa12.01□□□□□ -0.49
CCDC18-201ENST00000343253 HAUS8Q9BT25 410 aa12.01□□□□□ -0.49
CCDC18-201ENST00000343253 GPTP24298 496 aa12.01□□□□□ -0.49
CCDC18-201ENST00000343253 GUCY2FP51841 1108 aa12.01□□□□□ -0.49
CCDC18-201ENST00000343253 ESRRGP62508 458 aa12.01□□□□□ -0.49
CCDC18-201ENST00000343253 LONRF2Q1L5Z9 754 aa12.01□□□□□ -0.49
CCDC18-201ENST00000343253 SFMBT2Q5VUG0 894 aa12.01□□□□□ -0.49
CCDC18-201ENST00000343253 MMS22LQ6ZRQ5 1243 aa12.01□□□□□ -0.49
CCDC18-201ENST00000343253 CHST3Q7LGC8 479 aa12.01□□□□□ -0.49
CCDC18-201ENST00000343253 AMFRQ9UKV5 643 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms