RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 ASIC2Q16515 512 aa19.49■□□□□ 0.71
SMAD4-201ENST00000342988 PPP1R42Q7Z4L9 355 aa19.49■□□□□ 0.71
SMAD4-201ENST00000342988 SPDYE16A6NNV3 312 aaPredicted RBP19.49■□□□□ 0.71
SMAD4-201ENST00000342988 SPDYE2Q495Y8 402 aa19.49■□□□□ 0.71
SMAD4-201ENST00000342988 CAMSAP2Q08AD1 1489 aa19.49■□□□□ 0.71
SMAD4-201ENST00000342988 POMGNT1Q8WZA1 660 aa19.49■□□□□ 0.71
SMAD4-201ENST00000342988 ANAPC5Q9UJX4 755 aa19.49■□□□□ 0.71
SMAD4-201ENST00000342988 ATL3Q6DD88 541 aa19.49■□□□□ 0.71
SMAD4-201ENST00000342988 RAB44Q7Z6P3 723 aaPredicted RBP19.49■□□□□ 0.71
SMAD4-201ENST00000342988 CACTINQ8WUQ7 758 aaKnown RBP19.49■□□□□ 0.71
SMAD4-201ENST00000342988 FLOT1O75955 427 aa19.49■□□□□ 0.71
SMAD4-201ENST00000342988 GNAT2P19087 354 aa19.49■□□□□ 0.71
SMAD4-201ENST00000342988 NUCKS1Q9H1E3 243 aaKnown RBP19.48■□□□□ 0.71
SMAD4-201ENST00000342988 GARSP41250 739 aaKnown RBP19.48■□□□□ 0.71
SMAD4-201ENST00000342988 EVCP57679 992 aa19.48■□□□□ 0.71
SMAD4-201ENST00000342988 GIMAP6Q6P9H5 292 aa19.48■□□□□ 0.71
SMAD4-201ENST00000342988 SKA2Q8WVK7 121 aaPredicted RBP19.48■□□□□ 0.71
SMAD4-201ENST00000342988 CHMP6Q96FZ7 201 aa19.48■□□□□ 0.71
SMAD4-201ENST00000342988 NUTM2BA6NNL0 878 aaPredicted RBP19.48■□□□□ 0.71
SMAD4-201ENST00000342988 NUTM2EB1AL46 878 aaPredicted RBP19.48■□□□□ 0.71
SMAD4-201ENST00000342988 F8W8V4 182 aa19.48■□□□□ 0.71
SMAD4-201ENST00000342988 PDZD4Q76G19 769 aaPredicted RBP19.48■□□□□ 0.71
SMAD4-201ENST00000342988 CSRNP1Q96S65 589 aa19.48■□□□□ 0.71
SMAD4-201ENST00000342988 NOD1Q9Y239 953 aa19.48■□□□□ 0.71
SMAD4-201ENST00000342988 ERO1AQ96HE7 468 aa19.48■□□□□ 0.71
SMAD4-201ENST00000342988 TTC1Q99614 292 aa19.48■□□□□ 0.71
SMAD4-201ENST00000342988 TRMT112Q9UI30 125 aaKnown RBP19.48■□□□□ 0.71
SMAD4-201ENST00000342988 RIPOR2Q9Y4F9 1068 aa19.48■□□□□ 0.71
SMAD4-201ENST00000342988 IQCDQ96DY2 449 aa19.48■□□□□ 0.71
SMAD4-201ENST00000342988 CCDC159P0C7I6 412 aa19.48■□□□□ 0.71
SMAD4-201ENST00000342988 MRRFQ96E11 262 aaKnown RBP19.48■□□□□ 0.71
SMAD4-201ENST00000342988 TRIM8Q9BZR9 551 aa19.48■□□□□ 0.71
SMAD4-201ENST00000342988 BACH1O14867 736 aa19.48■□□□□ 0.71
SMAD4-201ENST00000342988 NEK2P51955 445 aa19.48■□□□□ 0.71
SMAD4-201ENST00000342988 FAM95CA0A1B0GW59 222 aa19.47■□□□□ 0.71
SMAD4-201ENST00000342988 GABPB1Q06547 395 aaPredicted RBP19.47■□□□□ 0.71
SMAD4-201ENST00000342988 SNCBQ16143 134 aa19.47■□□□□ 0.71
SMAD4-201ENST00000342988 RTEL1Q9NZ71 1219 aa19.47■□□□□ 0.71
SMAD4-201ENST00000342988 EEF1B2P24534 225 aaKnown RBP19.47■□□□□ 0.71
SMAD4-201ENST00000342988 SCYL1Q96KG9 808 aa19.47■□□□□ 0.71
SMAD4-201ENST00000342988 TRIM15Q9C019 465 aa19.47■□□□□ 0.71
SMAD4-201ENST00000342988 IFNA8P32881 189 aa19.47■□□□□ 0.71
SMAD4-201ENST00000342988 PROSER2Q86WR7 435 aaPredicted RBP19.47■□□□□ 0.71
SMAD4-201ENST00000342988 NUMA1Q14980 2115 aa19.47■□□□□ 0.71
SMAD4-201ENST00000342988 SESN3P58005 492 aa19.47■□□□□ 0.71
SMAD4-201ENST00000342988 RNASELQ05823 741 aaKnown RBP19.47■□□□□ 0.71
SMAD4-201ENST00000342988 UQCRFS1P1P0C7P4 283 aa19.46■□□□□ 0.71
SMAD4-201ENST00000342988 IQUBQ8NA54 791 aa19.46■□□□□ 0.71
SMAD4-201ENST00000342988 CROCCQ5TZA2 2017 aa19.46■□□□□ 0.71
SMAD4-201ENST00000342988 CLCN1P35523 988 aa19.46■□□□□ 0.71
SMAD4-201ENST00000342988 NUCB1Q02818 461 aa19.46■□□□□ 0.71
SMAD4-201ENST00000342988 CCDC105Q8IYK2 499 aa19.46■□□□□ 0.71
SMAD4-201ENST00000342988 GPHNQ9NQX3 736 aaPredicted RBP19.46■□□□□ 0.71
SMAD4-201ENST00000342988 SLC9C1Q4G0N8 1177 aa19.46■□□□□ 0.71
SMAD4-201ENST00000342988 TEX13AQ9BXU3 409 aaPredicted RBP19.46■□□□□ 0.71
SMAD4-201ENST00000342988 KCNG1Q9UIX4 513 aa19.46■□□□□ 0.71
SMAD4-201ENST00000342988 ARHGDIAP52565 204 aa19.46■□□□□ 0.71
SMAD4-201ENST00000342988 TMEM247A6NEH6 219 aa19.46■□□□□ 0.71
SMAD4-201ENST00000342988 RNF207Q6ZRF8 634 aa19.46■□□□□ 0.71
SMAD4-201ENST00000342988 GLT8D2Q9H1C3 349 aa19.46■□□□□ 0.71
SMAD4-201ENST00000342988 SART1O43290 800 aaKnown RBP19.46■□□□□ 0.71
SMAD4-201ENST00000342988 AKNAD1Q5T1N1 836 aa19.46■□□□□ 0.71
SMAD4-201ENST00000342988 SV2BQ7L1I2 683 aa19.46■□□□□ 0.71
SMAD4-201ENST00000342988 BRAPQ7Z569 592 aa19.46■□□□□ 0.71
SMAD4-201ENST00000342988 HDAC11Q96DB2 347 aa19.46■□□□□ 0.71
SMAD4-201ENST00000342988 RIC8AQ9NPQ8 531 aa19.46■□□□□ 0.71
SMAD4-201ENST00000342988 KAT6AQ92794 2004 aa19.46■□□□□ 0.7
SMAD4-201ENST00000342988 FLOT2Q14254 428 aa19.45■□□□□ 0.7
SMAD4-201ENST00000342988 HAUS3Q68CZ6 603 aa19.45■□□□□ 0.7
SMAD4-201ENST00000342988 ANLNQ9NQW6 1124 aa19.45■□□□□ 0.7
SMAD4-201ENST00000342988 TBCCQ15814 346 aa19.45■□□□□ 0.7
SMAD4-201ENST00000342988 NECAB1Q8N987 351 aa19.45■□□□□ 0.7
SMAD4-201ENST00000342988 WWC3Q9ULE0 1092 aa19.45■□□□□ 0.7
SMAD4-201ENST00000342988 M0QZ92 97 aa19.45■□□□□ 0.7
SMAD4-201ENST00000342988 ARHGAP6O43182 974 aa19.45■□□□□ 0.7
SMAD4-201ENST00000342988 MIS12Q9H081 205 aa19.45■□□□□ 0.7
SMAD4-201ENST00000342988 TYW5A2RUC4 315 aaKnown RBP19.45■□□□□ 0.7
SMAD4-201ENST00000342988 SKOR1P84550 965 aa19.45■□□□□ 0.7
SMAD4-201ENST00000342988 GRAMD4Q6IC98 578 aa19.45■□□□□ 0.7
SMAD4-201ENST00000342988 FBXO41Q8TF61 875 aa19.45■□□□□ 0.7
SMAD4-201ENST00000342988 SUCLA2Q9P2R7 463 aaPredicted RBP19.45■□□□□ 0.7
SMAD4-201ENST00000342988 ABCC11Q96J66 1382 aa19.45■□□□□ 0.7
SMAD4-201ENST00000342988 LMOD1P29536 600 aaPredicted RBP19.45■□□□□ 0.7
SMAD4-201ENST00000342988 PEX19P40855 299 aa19.45■□□□□ 0.7
SMAD4-201ENST00000342988 IL1RL1Q01638 556 aa19.45■□□□□ 0.7
SMAD4-201ENST00000342988 KRT81Q14533 505 aa19.45■□□□□ 0.7
SMAD4-201ENST00000342988 KARSQ15046 597 aaKnown RBP19.45■□□□□ 0.7
SMAD4-201ENST00000342988 RPS6KC1Q96S38 1066 aa19.45■□□□□ 0.7
SMAD4-201ENST00000342988 ITM2BQ9Y287 266 aa19.45■□□□□ 0.7
SMAD4-201ENST00000342988 SSFA2P28290 1259 aa19.45■□□□□ 0.7
SMAD4-201ENST00000342988 CCDC152Q4G0S7 254 aa19.45■□□□□ 0.7
SMAD4-201ENST00000342988 GDAP1L1Q96MZ0 367 aa19.45■□□□□ 0.7
SMAD4-201ENST00000342988 MED4Q9NPJ6 270 aa19.45■□□□□ 0.7
SMAD4-201ENST00000342988 GSTA4O15217 222 aa19.44■□□□□ 0.7
SMAD4-201ENST00000342988 RTEL1-TNFRSF6BF6WH68 1400 aa19.44■□□□□ 0.7
SMAD4-201ENST00000342988 PRPSAP1Q14558 356 aa19.44■□□□□ 0.7
SMAD4-201ENST00000342988 KRT80Q6KB66 452 aa19.44■□□□□ 0.7
SMAD4-201ENST00000342988 ZKSCAN5Q9Y2L8 839 aa19.44■□□□□ 0.7
SMAD4-201ENST00000342988 CASP2P42575 452 aa19.44■□□□□ 0.7
SMAD4-201ENST00000342988 CCDC13Q8IYE1 715 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 730.7 ms