RNA–Protein interactions for RNA: ENST00000342631.7

SNED1-202, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best) BASIC

Gene SNED1, Length 1,930 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-202ENST00000342631 ORC4O43929 436 aa19.35■□□□□ 0.69
SNED1-202ENST00000342631 CYP2D6P10635 497 aa19.35■□□□□ 0.69
SNED1-202ENST00000342631 RUFY3Q7L099 469 aa19.35■□□□□ 0.69
SNED1-202ENST00000342631 FOXP4Q8IVH2 680 aaPredicted RBP19.35■□□□□ 0.69
SNED1-202ENST00000342631 SWAP70Q9UH65 585 aa19.35■□□□□ 0.69
SNED1-202ENST00000342631 CNTNAP1P78357 1384 aa19.35■□□□□ 0.69
SNED1-202ENST00000342631 ST18O60284 1047 aa19.34■□□□□ 0.69
SNED1-202ENST00000342631 HIRAP54198 1017 aaPredicted RBP19.34■□□□□ 0.69
SNED1-202ENST00000342631 C16orf86Q6ZW13 317 aa19.34■□□□□ 0.69
SNED1-202ENST00000342631 PNMA8AQ86V59 439 aaPredicted RBP19.34■□□□□ 0.69
SNED1-202ENST00000342631 SERPINB13Q9UIV8 391 aa19.34■□□□□ 0.69
SNED1-202ENST00000342631 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.34■□□□□ 0.69
SNED1-202ENST00000342631 PPP2R3BQ9Y5P8 575 aa19.34■□□□□ 0.69
SNED1-202ENST00000342631 WDR19Q8NEZ3 1342 aa19.34■□□□□ 0.69
SNED1-202ENST00000342631 ANP32AP39687 249 aaKnown RBP19.33■□□□□ 0.69
SNED1-202ENST00000342631 DHX32Q7L7V1 743 aaKnown RBP19.33■□□□□ 0.69
SNED1-202ENST00000342631 METTL16Q86W50 562 aaKnown RBP19.33■□□□□ 0.69
SNED1-202ENST00000342631 ZSCAN29Q8IWY8 852 aaPredicted RBP19.33■□□□□ 0.69
SNED1-202ENST00000342631 ZFPM1Q8IX07 1006 aa19.33■□□□□ 0.69
SNED1-202ENST00000342631 ESR2Q92731 530 aa19.33■□□□□ 0.69
SNED1-202ENST00000342631 RPS6KB1P23443 525 aa19.33■□□□□ 0.68
SNED1-202ENST00000342631 MCM5P33992 734 aa19.33■□□□□ 0.68
SNED1-202ENST00000342631 NEK4P51957 841 aa19.33■□□□□ 0.68
SNED1-202ENST00000342631 GABPAQ06546 454 aa19.33■□□□□ 0.68
SNED1-202ENST00000342631 ANGEL2Q5VTE6 544 aaKnown RBP19.33■□□□□ 0.68
SNED1-202ENST00000342631 MTA3Q9BTC8 594 aa19.33■□□□□ 0.68
SNED1-202ENST00000342631 ALDH8A1Q9H2A2 487 aaPredicted RBP19.33■□□□□ 0.68
SNED1-202ENST00000342631 TAF1DQ9H5J8 278 aaPredicted RBP19.33■□□□□ 0.68
SNED1-202ENST00000342631 DDTLA6NHG4 134 aaPredicted RBP19.32■□□□□ 0.68
SNED1-202ENST00000342631 SH3BP5LQ7L8J4 393 aa19.32■□□□□ 0.68
SNED1-202ENST00000342631 MB21D2Q8IYB1 491 aaPredicted RBP19.32■□□□□ 0.68
SNED1-202ENST00000342631 HERC5Q9UII4 1024 aaKnown RBP19.32■□□□□ 0.68
SNED1-202ENST00000342631 NEDD4P46934 1319 aa19.32■□□□□ 0.68
SNED1-202ENST00000342631 RASA3Q14644 834 aa19.31■□□□□ 0.68
SNED1-202ENST00000342631 HOOK2Q96ED9 719 aa19.31■□□□□ 0.68
SNED1-202ENST00000342631 CSRNP1Q96S65 589 aa19.31■□□□□ 0.68
SNED1-202ENST00000342631 UPF3BQ9BZI7 483 aaKnown RBP19.31■□□□□ 0.68
SNED1-202ENST00000342631 MKNK2Q9HBH9 465 aa19.31■□□□□ 0.68
SNED1-202ENST00000342631 GGA3Q9NZ52 723 aa19.31■□□□□ 0.68
SNED1-202ENST00000342631 PGAP2Q9UHJ9 254 aa19.31■□□□□ 0.68
SNED1-202ENST00000342631 POTECB2RU33 542 aa19.31■□□□□ 0.68
SNED1-202ENST00000342631 CDK8P49336 464 aa19.31■□□□□ 0.68
SNED1-202ENST00000342631 MCM2P49736 904 aa19.31■□□□□ 0.68
SNED1-202ENST00000342631 EXOSC10Q01780 885 aaKnown RBP19.31■□□□□ 0.68
SNED1-202ENST00000342631 FBXL16Q8N461 479 aa19.31■□□□□ 0.68
SNED1-202ENST00000342631 DCPSQ96C86 337 aaKnown RBP19.31■□□□□ 0.68
SNED1-202ENST00000342631 TOMM22Q9NS69 142 aa19.31■□□□□ 0.68
SNED1-202ENST00000342631 TBC1D12O60347 775 aa19.3■□□□□ 0.68
SNED1-202ENST00000342631 VEGFAP15692 232 aaPredicted RBP19.3■□□□□ 0.68
SNED1-202ENST00000342631 SLC4A8Q2Y0W8 1093 aa19.3■□□□□ 0.68
SNED1-202ENST00000342631 CRACR2BQ8N4Y2 399 aaPredicted RBP19.3■□□□□ 0.68
SNED1-202ENST00000342631 SNX21Q969T3 373 aa19.3■□□□□ 0.68
SNED1-202ENST00000342631 DYNLL2Q96FJ2 89 aa19.3■□□□□ 0.68
SNED1-202ENST00000342631 TRIM34Q9BYJ4 488 aa19.3■□□□□ 0.68
SNED1-202ENST00000342631 DEFB129Q9H1M3 183 aa19.3■□□□□ 0.68
SNED1-202ENST00000342631 PDRG1Q9NUG6 133 aa19.3■□□□□ 0.68
SNED1-202ENST00000342631 TACC3Q9Y6A5 838 aa19.3■□□□□ 0.68
SNED1-202ENST00000342631 SIPA1L1O43166 1804 aa19.3■□□□□ 0.68
SNED1-202ENST00000342631 B4E1Z4 1266 aa19.29■□□□□ 0.68
SNED1-202ENST00000342631 ANKRD1Q15327 319 aa19.29■□□□□ 0.68
SNED1-202ENST00000342631 ZNF444Q8N0Y2 327 aaPredicted RBP19.29■□□□□ 0.68
SNED1-202ENST00000342631 TTC14Q96N46 770 aa19.29■□□□□ 0.68
SNED1-202ENST00000342631 TMEM39BQ9GZU3 492 aa19.29■□□□□ 0.68
SNED1-202ENST00000342631 ASTN2O75129 1339 aaPredicted RBP19.29■□□□□ 0.68
SNED1-202ENST00000342631 SMIM22K7EJ46 135 aa19.29■□□□□ 0.68
SNED1-202ENST00000342631 KDM4AO75164 1064 aa19.29■□□□□ 0.68
SNED1-202ENST00000342631 EVX2Q03828 476 aa19.29■□□□□ 0.68
SNED1-202ENST00000342631 RRP12Q5JTH9 1297 aaKnown RBP19.29■□□□□ 0.68
SNED1-202ENST00000342631 TMEM87BQ96K49 555 aa19.29■□□□□ 0.68
SNED1-202ENST00000342631 MYH8P13535 1937 aa19.28■□□□□ 0.68
SNED1-202ENST00000342631 MAP3K10Q02779 954 aa19.28■□□□□ 0.68
SNED1-202ENST00000342631 SART3Q15020 963 aaKnown RBP19.28■□□□□ 0.68
SNED1-202ENST00000342631 CCDC178Q5BJE1 867 aa19.28■□□□□ 0.68
SNED1-202ENST00000342631 CCDC17Q96LX7 622 aa19.28■□□□□ 0.68
SNED1-202ENST00000342631 TEPSINQ96N21 525 aa19.28■□□□□ 0.68
SNED1-202ENST00000342631 INCENPQ9NQS7 918 aa19.28■□□□□ 0.68
SNED1-202ENST00000342631 ZSWIM5Q9P217 1185 aa19.28■□□□□ 0.68
SNED1-202ENST00000342631 PRC1O43663 620 aa19.27■□□□□ 0.68
SNED1-202ENST00000342631 RANBP6O60518 1105 aaKnown RBP19.27■□□□□ 0.68
SNED1-202ENST00000342631 IQCA1Q86XH1 822 aa19.27■□□□□ 0.68
SNED1-202ENST00000342631 SULF1Q8IWU6 871 aa19.27■□□□□ 0.68
SNED1-202ENST00000342631 STK11IPQ8N1F8 1099 aa19.27■□□□□ 0.68
SNED1-202ENST00000342631 PRDM1O75626 825 aa19.27■□□□□ 0.67
SNED1-202ENST00000342631 RASA1P20936 1047 aa19.27■□□□□ 0.67
SNED1-202ENST00000342631 TATDN1Q6P1N9 297 aa19.27■□□□□ 0.67
SNED1-202ENST00000342631 AGXT2Q9BYV1 514 aa19.27■□□□□ 0.67
SNED1-202ENST00000342631 POLR2AP24928 1970 aaKnown RBP19.26■□□□□ 0.67
SNED1-202ENST00000342631 TSPY2A6NKD2 308 aa19.26■□□□□ 0.67
SNED1-202ENST00000342631 CPA1P15085 419 aa19.26■□□□□ 0.67
SNED1-202ENST00000342631 SHMT1P34896 483 aa19.26■□□□□ 0.67
SNED1-202ENST00000342631 BECN1Q14457 450 aa19.26■□□□□ 0.67
SNED1-202ENST00000342631 SLC44A5Q8NCS7 719 aa19.26■□□□□ 0.67
SNED1-202ENST00000342631 TCP11L1Q9NUJ3 509 aa19.26■□□□□ 0.67
SNED1-202ENST00000342631 ANTXR2P58335 489 aa19.25■□□□□ 0.67
SNED1-202ENST00000342631 FGD1P98174 961 aa19.25■□□□□ 0.67
SNED1-202ENST00000342631 CYB5R4Q7L1T6 521 aa19.25■□□□□ 0.67
SNED1-202ENST00000342631 TMTC2Q8N394 836 aa19.25■□□□□ 0.67
SNED1-202ENST00000342631 UBAC1Q9BSL1 405 aa19.25■□□□□ 0.67
SNED1-202ENST00000342631 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.25■□□□□ 0.67
SNED1-202ENST00000342631 PLIN4Q96Q06 1357 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms