RNA–Protein interactions for RNA: ENST00000341491.8

ATF3-202, Transcript of activating transcription factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF3, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-202ENST00000341491 ZBTB12Q9Y330 459 aaPredicted RBP16.09■□□□□ 0.17
ATF3-202ENST00000341491 FER1L6Q2WGJ9 1857 aa16.09■□□□□ 0.17
ATF3-202ENST00000341491 MYH6P13533 1939 aa16.08■□□□□ 0.17
ATF3-202ENST00000341491 POLR3DP05423 398 aaPredicted RBP16.08■□□□□ 0.16
ATF3-202ENST00000341491 PPP4CP60510 307 aa16.08■□□□□ 0.16
ATF3-202ENST00000341491 NFIAQ12857 509 aa16.08■□□□□ 0.16
ATF3-202ENST00000341491 LARGE2Q8N3Y3 721 aa16.08■□□□□ 0.16
ATF3-202ENST00000341491 CCDC82Q8N4S0 544 aa16.08■□□□□ 0.16
ATF3-202ENST00000341491 PHKBQ93100 1093 aa16.08■□□□□ 0.16
ATF3-202ENST00000341491 CNNM2Q9H8M5 875 aa16.08■□□□□ 0.16
ATF3-202ENST00000341491 ARPP21Q9UBL0 812 aaPredicted RBP16.08■□□□□ 0.16
ATF3-202ENST00000341491 BCS1LQ9Y276 419 aa16.08■□□□□ 0.16
ATF3-202ENST00000341491 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.08■□□□□ 0.16
ATF3-202ENST00000341491 CRKP46108 304 aa16.07■□□□□ 0.16
ATF3-202ENST00000341491 RASSF7Q02833 373 aa16.07■□□□□ 0.16
ATF3-202ENST00000341491 WTAPQ15007 396 aa16.07■□□□□ 0.16
ATF3-202ENST00000341491 C12orf60Q5U649 245 aa16.07■□□□□ 0.16
ATF3-202ENST00000341491 PODNQ7Z5L7 613 aa16.07■□□□□ 0.16
ATF3-202ENST00000341491 ZFPM1Q8IX07 1006 aa16.07■□□□□ 0.16
ATF3-202ENST00000341491 NUP133Q8WUM0 1156 aa16.07■□□□□ 0.16
ATF3-202ENST00000341491 ZNF274Q96GC6 653 aaPredicted RBP16.07■□□□□ 0.16
ATF3-202ENST00000341491 PIM2Q9P1W9 311 aa16.07■□□□□ 0.16
ATF3-202ENST00000341491 MTMR7Q9Y216 660 aa16.07■□□□□ 0.16
ATF3-202ENST00000341491 USP17L3A6NCW0 530 aa16.07■□□□□ 0.16
ATF3-202ENST00000341491 USP17L4A6NCW7 530 aa16.07■□□□□ 0.16
ATF3-202ENST00000341491 ZBTB22O15209 634 aa16.07■□□□□ 0.16
ATF3-202ENST00000341491 F13A1P00488 732 aa16.07■□□□□ 0.16
ATF3-202ENST00000341491 FDPSP14324 419 aaKnown RBP16.07■□□□□ 0.16
ATF3-202ENST00000341491 METAP2P50579 478 aaKnown RBP eCLIP16.07■□□□□ 0.16
ATF3-202ENST00000341491 CDC42EP5Q6NZY7 148 aa16.07■□□□□ 0.16
ATF3-202ENST00000341491 RASGRP2Q7LDG7 609 aa16.07■□□□□ 0.16
ATF3-202ENST00000341491 USP17L1Q7RTZ2 530 aa16.07■□□□□ 0.16
ATF3-202ENST00000341491 ENAHQ8N8S7 591 aaPredicted RBP16.07■□□□□ 0.16
ATF3-202ENST00000341491 UBAC1Q9BSL1 405 aa16.07■□□□□ 0.16
ATF3-202ENST00000341491 RNF41Q9H4P4 317 aaPredicted RBP16.07■□□□□ 0.16
ATF3-202ENST00000341491 USP40Q9NVE5 1235 aa16.07■□□□□ 0.16
ATF3-202ENST00000341491 CNPY2Q9Y2B0 182 aa16.07■□□□□ 0.16
ATF3-202ENST00000341491 WDR33Q9C0J8 1336 aaKnown RBP16.07■□□□□ 0.16
ATF3-202ENST00000341491 MYH15Q9Y2K3 1946 aa16.06■□□□□ 0.16
ATF3-202ENST00000341491 SHTN1A0MZ66 631 aa16.06■□□□□ 0.16
ATF3-202ENST00000341491 GOLGA8AA7E2F4 631 aa16.06■□□□□ 0.16
ATF3-202ENST00000341491 TCP10Q12799 353 aa16.06■□□□□ 0.16
ATF3-202ENST00000341491 APOBEC3HQ6NTF7 200 aaKnown RBP16.06■□□□□ 0.16
ATF3-202ENST00000341491 GIMAP6Q6P9H5 292 aa16.06■□□□□ 0.16
ATF3-202ENST00000341491 SMARCC2Q8TAQ2 1214 aa16.06■□□□□ 0.16
ATF3-202ENST00000341491 ESR2Q92731 530 aa16.06■□□□□ 0.16
ATF3-202ENST00000341491 CCDC69A6NI79 296 aa16.06■□□□□ 0.16
ATF3-202ENST00000341491 FAM196BA6NMK8 535 aa16.06■□□□□ 0.16
ATF3-202ENST00000341491 PSMD14O00487 310 aa16.06■□□□□ 0.16
ATF3-202ENST00000341491 SIPA1L1O43166 1804 aa16.06■□□□□ 0.16
ATF3-202ENST00000341491 ZBTB43O43298 467 aa16.06■□□□□ 0.16
ATF3-202ENST00000341491 WDHD1O75717 1129 aaPredicted RBP16.06■□□□□ 0.16
ATF3-202ENST00000341491 NCLP19338 710 aaKnown RBP16.06■□□□□ 0.16
ATF3-202ENST00000341491 EVCP57679 992 aa16.06■□□□□ 0.16
ATF3-202ENST00000341491 FAM184AQ8NB25 1140 aa16.06■□□□□ 0.16
ATF3-202ENST00000341491 WDR19Q8NEZ3 1342 aa16.06■□□□□ 0.16
ATF3-202ENST00000341491 TMEM87BQ96K49 555 aa16.06■□□□□ 0.16
ATF3-202ENST00000341491 FAM217BQ9NTX9 383 aaPredicted RBP16.06■□□□□ 0.16
ATF3-202ENST00000341491 SCAF8Q9UPN6 1271 aaKnown RBP16.06■□□□□ 0.16
ATF3-202ENST00000341491 PRPF40AO75400 957 aaKnown RBP16.05■□□□□ 0.16
ATF3-202ENST00000341491 SEC23AQ15436 765 aa16.05■□□□□ 0.16
ATF3-202ENST00000341491 DALRD3Q5D0E6 543 aaKnown RBP16.05■□□□□ 0.16
ATF3-202ENST00000341491 STRIP1Q5VSL9 837 aa16.05■□□□□ 0.16
ATF3-202ENST00000341491 CLEC10AQ8IUN9 316 aa16.05■□□□□ 0.16
ATF3-202ENST00000341491 FBXL16Q8N461 479 aa16.05■□□□□ 0.16
ATF3-202ENST00000341491 TEKT1Q969V4 418 aa16.05■□□□□ 0.16
ATF3-202ENST00000341491 RTN4Q9NQC3 1192 aaKnown RBP16.05■□□□□ 0.16
ATF3-202ENST00000341491 SLC12A7Q9Y666 1083 aa16.05■□□□□ 0.16
ATF3-202ENST00000341491 hCG_1642624A0A1W2PR95 340 aa16.04■□□□□ 0.16
ATF3-202ENST00000341491 TSPY2A6NKD2 308 aa16.04■□□□□ 0.16
ATF3-202ENST00000341491 TRAK2O60296 914 aa16.04■□□□□ 0.16
ATF3-202ENST00000341491 DNM1Q05193 864 aaKnown RBP16.04■□□□□ 0.16
ATF3-202ENST00000341491 SBK1Q52WX2 424 aa16.04■□□□□ 0.16
ATF3-202ENST00000341491 FAM163AQ96GL9 167 aaPredicted RBP16.04■□□□□ 0.16
ATF3-202ENST00000341491 ZSCAN10Q96SZ4 725 aaPredicted RBP16.04■□□□□ 0.16
ATF3-202ENST00000341491 DDX11L8A8MPP1 907 aa16.04■□□□□ 0.16
ATF3-202ENST00000341491 NFKBIEO00221 500 aa16.04■□□□□ 0.16
ATF3-202ENST00000341491 CPLX1O14810 134 aa16.04■□□□□ 0.16
ATF3-202ENST00000341491 FIBPO43427 364 aa16.04■□□□□ 0.16
ATF3-202ENST00000341491 PRELPP51888 382 aa16.04■□□□□ 0.16
ATF3-202ENST00000341491 TFAP4Q01664 338 aa16.04■□□□□ 0.16
ATF3-202ENST00000341491 SHROOM1Q2M3G4 852 aaPredicted RBP16.04■□□□□ 0.16
ATF3-202ENST00000341491 RTKN2Q8IZC4 609 aa16.04■□□□□ 0.16
ATF3-202ENST00000341491 ZNF654Q8IZM8 581 aa16.04■□□□□ 0.16
ATF3-202ENST00000341491 ERICH2A1L162 156 aa16.03■□□□□ 0.16
ATF3-202ENST00000341491 TGFB2P61812 414 aa16.03■□□□□ 0.16
ATF3-202ENST00000341491 TDRD3Q9H7E2 651 aaKnown RBP16.03■□□□□ 0.16
ATF3-202ENST00000341491 MKNK2Q9HBH9 465 aa16.03■□□□□ 0.16
ATF3-202ENST00000341491 LMBRD1Q9NUN5 540 aa16.03■□□□□ 0.16
ATF3-202ENST00000341491 GADD45BO75293 160 aaPredicted RBP16.02■□□□□ 0.16
ATF3-202ENST00000341491 GUCY1A2P33402 732 aa16.02■□□□□ 0.16
ATF3-202ENST00000341491 IFIT1BQ5T764 474 aaKnown RBP16.02■□□□□ 0.16
ATF3-202ENST00000341491 SGMS1Q86VZ5 419 aa16.02■□□□□ 0.16
ATF3-202ENST00000341491 SLF2Q8IX21 1173 aa16.02■□□□□ 0.16
ATF3-202ENST00000341491 SUPT20HQ8NEM7 779 aa16.02■□□□□ 0.16
ATF3-202ENST00000341491 PIBF1Q8WXW3 757 aa16.02■□□□□ 0.16
ATF3-202ENST00000341491 PSMD1Q99460 953 aa16.02■□□□□ 0.16
ATF3-202ENST00000341491 FTOQ9C0B1 505 aaKnown RBP eCLIP16.02■□□□□ 0.16
ATF3-202ENST00000341491 IL17RBQ9NRM6 502 aa16.02■□□□□ 0.16
ATF3-202ENST00000341491 ORC3Q9UBD5 711 aaPredicted RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms