RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 ZNF213O14771 459 aa17.51■□□□□ 0.39
BRAT1-201ENST00000340611 IL1R1P14778 569 aa17.51■□□□□ 0.39
BRAT1-201ENST00000340611 SYT1P21579 422 aa17.51■□□□□ 0.39
BRAT1-201ENST00000340611 TDO2P48775 406 aa17.51■□□□□ 0.39
BRAT1-201ENST00000340611 TOB2Q14106 344 aaPredicted RBP17.51■□□□□ 0.39
BRAT1-201ENST00000340611 IMMTQ16891 758 aaKnown RBP17.51■□□□□ 0.39
BRAT1-201ENST00000340611 C7orf43Q8WVR3 580 aa17.51■□□□□ 0.39
BRAT1-201ENST00000340611 CNKSR1Q969H4 720 aa17.51■□□□□ 0.39
BRAT1-201ENST00000340611 NAPBQ9H115 298 aa17.51■□□□□ 0.39
BRAT1-201ENST00000340611 C10orf71Q711Q0 1435 aa17.51■□□□□ 0.39
BRAT1-201ENST00000340611 Q6ZUG5 572 aa17.51■□□□□ 0.39
BRAT1-201ENST00000340611 CERS5Q8N5B7 392 aa17.51■□□□□ 0.39
BRAT1-201ENST00000340611 SLC16A10Q8TF71 515 aa17.51■□□□□ 0.39
BRAT1-201ENST00000340611 ZNF592Q92610 1267 aa17.51■□□□□ 0.39
BRAT1-201ENST00000340611 KCNF1Q9H3M0 494 aa17.51■□□□□ 0.39
BRAT1-201ENST00000340611 PATL2C9JE40 543 aaKnown RBP17.51■□□□□ 0.39
BRAT1-201ENST00000340611 UBE2HP62256 183 aa17.51■□□□□ 0.39
BRAT1-201ENST00000340611 ME3Q16798 604 aa17.51■□□□□ 0.39
BRAT1-201ENST00000340611 CCDC88AQ3V6T2 1871 aa17.5■□□□□ 0.39
BRAT1-201ENST00000340611 STX6O43752 255 aa17.5■□□□□ 0.39
BRAT1-201ENST00000340611 PSEN1P49768 467 aa17.5■□□□□ 0.39
BRAT1-201ENST00000340611 SCNN1DP51172 638 aa17.5■□□□□ 0.39
BRAT1-201ENST00000340611 GTF2A1P52655 376 aaPredicted RBP17.5■□□□□ 0.39
BRAT1-201ENST00000340611 CCDC83Q8IWF9 413 aa17.5■□□□□ 0.39
BRAT1-201ENST00000340611 TM6SF1Q9BZW5 370 aa17.5■□□□□ 0.39
BRAT1-201ENST00000340611 MYH2Q9UKX2 1941 aa17.5■□□□□ 0.39
BRAT1-201ENST00000340611 PSMA5P28066 241 aa17.5■□□□□ 0.39
BRAT1-201ENST00000340611 C15orf52Q6ZUT6 534 aaKnown RBP17.5■□□□□ 0.39
BRAT1-201ENST00000340611 TMC4Q7Z404 712 aa17.5■□□□□ 0.39
BRAT1-201ENST00000340611 TTLL6Q8N841 843 aa17.5■□□□□ 0.39
BRAT1-201ENST00000340611 WDR66Q8TBY9 1149 aa17.5■□□□□ 0.39
BRAT1-201ENST00000340611 KIAA1524Q8TCG1 905 aa17.5■□□□□ 0.39
BRAT1-201ENST00000340611 BRF1Q92994 677 aa17.5■□□□□ 0.39
BRAT1-201ENST00000340611 SCN9AQ15858 1988 aa17.49■□□□□ 0.39
BRAT1-201ENST00000340611 ST3GAL1Q11201 340 aa17.49■□□□□ 0.39
BRAT1-201ENST00000340611 TSGA10IPQ3SY00 556 aa17.49■□□□□ 0.39
BRAT1-201ENST00000340611 RRP12Q5JTH9 1297 aaKnown RBP17.49■□□□□ 0.39
BRAT1-201ENST00000340611 TMEM87AQ8NBN3 555 aa17.49■□□□□ 0.39
BRAT1-201ENST00000340611 MTFR1LQ9H019 292 aa17.49■□□□□ 0.39
BRAT1-201ENST00000340611 PCDHAC2Q9Y5I4 1007 aa17.49■□□□□ 0.39
BRAT1-201ENST00000340611 GPATCH11Q8N954 259 aa17.49■□□□□ 0.39
BRAT1-201ENST00000340611 NEDD4P46934 1319 aa17.49■□□□□ 0.39
BRAT1-201ENST00000340611 B4E1Z4 1266 aa17.48■□□□□ 0.39
BRAT1-201ENST00000340611 CYP2D6P10635 497 aa17.48■□□□□ 0.39
BRAT1-201ENST00000340611 DNM1Q05193 864 aaKnown RBP17.48■□□□□ 0.39
BRAT1-201ENST00000340611 C10orf67Q8IYJ2 551 aa17.48■□□□□ 0.39
BRAT1-201ENST00000340611 SH3RF3Q8TEJ3 882 aaPredicted RBP17.48■□□□□ 0.39
BRAT1-201ENST00000340611 ZNF277Q9NRM2 450 aaPredicted RBP17.48■□□□□ 0.39
BRAT1-201ENST00000340611 LIMCH1Q9UPQ0 1083 aa17.48■□□□□ 0.39
BRAT1-201ENST00000340611 SMC3Q9UQE7 1217 aa17.48■□□□□ 0.39
BRAT1-201ENST00000340611 PRDM1O75626 825 aa17.48■□□□□ 0.39
BRAT1-201ENST00000340611 F13A1P00488 732 aa17.48■□□□□ 0.39
BRAT1-201ENST00000340611 POLD1P28340 1107 aa17.48■□□□□ 0.39
BRAT1-201ENST00000340611 APOBRQ0VD83 1088 aa17.48■□□□□ 0.39
BRAT1-201ENST00000340611 TSPYL1Q9H0U9 437 aa17.48■□□□□ 0.39
BRAT1-201ENST00000340611 ZKSCAN3Q9BRR0 538 aa17.47■□□□□ 0.39
BRAT1-201ENST00000340611 KRT32Q14532 448 aa17.47■□□□□ 0.39
BRAT1-201ENST00000340611 CYB5R4Q7L1T6 521 aa17.47■□□□□ 0.39
BRAT1-201ENST00000340611 TICAM2Q86XR7 235 aa17.47■□□□□ 0.39
BRAT1-201ENST00000340611 COA1Q9GZY4 146 aa17.47■□□□□ 0.39
BRAT1-201ENST00000340611 SENP2Q9HC62 589 aa17.47■□□□□ 0.39
BRAT1-201ENST00000340611 ADAMTSL1Q8N6G6 1762 aa17.47■□□□□ 0.39
BRAT1-201ENST00000340611 TRIM66O15016 1216 aa17.46■□□□□ 0.39
BRAT1-201ENST00000340611 ECE2O60344 883 aa17.46■□□□□ 0.39
BRAT1-201ENST00000340611 FUCA2Q9BTY2 467 aa17.46■□□□□ 0.39
BRAT1-201ENST00000340611 ANTXR2P58335 489 aa17.46■□□□□ 0.39
BRAT1-201ENST00000340611 ILDR2Q71H61 639 aa17.46■□□□□ 0.39
BRAT1-201ENST00000340611 DHX32Q7L7V1 743 aaKnown RBP17.46■□□□□ 0.39
BRAT1-201ENST00000340611 KIAA0825Q8IV33 1275 aa17.46■□□□□ 0.39
BRAT1-201ENST00000340611 GTF3C6Q969F1 213 aa17.46■□□□□ 0.39
BRAT1-201ENST00000340611 USP17L12C9JPN9 530 aa17.45■□□□□ 0.38
BRAT1-201ENST00000340611 USP17L21D6R901 530 aa17.45■□□□□ 0.38
BRAT1-201ENST00000340611 PPIP5K2O43314 1243 aa17.45■□□□□ 0.38
BRAT1-201ENST00000340611 KMT5BQ4FZB7 885 aa17.45■□□□□ 0.38
BRAT1-201ENST00000340611 NLGN2Q8NFZ4 835 aa17.45■□□□□ 0.38
BRAT1-201ENST00000340611 NEK11Q8NG66 645 aa17.45■□□□□ 0.38
BRAT1-201ENST00000340611 PDS5AQ29RF7 1337 aaKnown RBP17.45■□□□□ 0.38
BRAT1-201ENST00000340611 USP17L8P0C7I0 530 aa17.45■□□□□ 0.38
BRAT1-201ENST00000340611 SPTY2D1Q68D10 685 aaPredicted RBP17.45■□□□□ 0.38
BRAT1-201ENST00000340611 NOL10Q9BSC4 688 aaKnown RBP17.45■□□□□ 0.38
BRAT1-201ENST00000340611 GEMIN8Q9NWZ8 242 aaKnown RBP17.45■□□□□ 0.38
BRAT1-201ENST00000340611 SAP30BPQ9UHR5 308 aaKnown RBP17.45■□□□□ 0.38
BRAT1-201ENST00000340611 TAOK2Q9UL54 1235 aa17.45■□□□□ 0.38
BRAT1-201ENST00000340611 VPS37CA5D8V6 355 aaPredicted RBP17.44■□□□□ 0.38
BRAT1-201ENST00000340611 BTDP43251 543 aa17.44■□□□□ 0.38
BRAT1-201ENST00000340611 CCT2P78371 535 aaKnown RBP17.44■□□□□ 0.38
BRAT1-201ENST00000340611 SAMD1Q6SPF0 538 aaPredicted RBP17.44■□□□□ 0.38
BRAT1-201ENST00000340611 TGFBRAP1Q8WUH2 860 aa17.44■□□□□ 0.38
BRAT1-201ENST00000340611 NCOA5Q9HCD5 579 aaKnown RBP17.44■□□□□ 0.38
BRAT1-201ENST00000340611 TTF2Q9UNY4 1162 aaKnown RBP17.44■□□□□ 0.38
BRAT1-201ENST00000340611 PRC1O43663 620 aa17.44■□□□□ 0.38
BRAT1-201ENST00000340611 PTGS1P23219 599 aa17.44■□□□□ 0.38
BRAT1-201ENST00000340611 MMP14P50281 582 aa17.44■□□□□ 0.38
BRAT1-201ENST00000340611 EXOSC10Q01780 885 aaKnown RBP17.44■□□□□ 0.38
BRAT1-201ENST00000340611 RALYLQ86SE5 291 aaKnown RBP17.44■□□□□ 0.38
BRAT1-201ENST00000340611 MAPKAPK5Q8IW41 473 aa17.44■□□□□ 0.38
BRAT1-201ENST00000340611 SALL1Q9NSC2 1324 aa17.44■□□□□ 0.38
BRAT1-201ENST00000340611 YDJCA8MPS7 323 aa17.44■□□□□ 0.38
BRAT1-201ENST00000340611 RXRAP19793 462 aa17.44■□□□□ 0.38
BRAT1-201ENST00000340611 PTGER2P43116 358 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms