RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 PDE8BO95263 885 aa16.47■□□□□ 0.23
CPSF7-201ENST00000340437 SART3Q15020 963 aaKnown RBP16.47■□□□□ 0.23
CPSF7-201ENST00000340437 REXO1L1PQ8IX06 675 aa16.47■□□□□ 0.23
CPSF7-201ENST00000340437 ATRIPQ8WXE1 791 aa16.47■□□□□ 0.23
CPSF7-201ENST00000340437 PIGBQ92521 554 aa16.47■□□□□ 0.23
CPSF7-201ENST00000340437 EPSTI1Q96J88 318 aa16.47■□□□□ 0.23
CPSF7-201ENST00000340437 EPB41L4AQ9HCS5 686 aaPredicted RBP16.47■□□□□ 0.23
CPSF7-201ENST00000340437 FAM217BQ9NTX9 383 aaPredicted RBP16.47■□□□□ 0.23
CPSF7-201ENST00000340437 INTS13Q9NVM9 706 aa16.47■□□□□ 0.23
CPSF7-201ENST00000340437 MAPK8IP1Q9UQF2 711 aa16.47■□□□□ 0.23
CPSF7-201ENST00000340437 TEX33O43247 280 aa16.46■□□□□ 0.23
CPSF7-201ENST00000340437 TRIM65Q6PJ69 517 aa16.46■□□□□ 0.23
CPSF7-201ENST00000340437 NLRP10Q86W26 655 aa16.46■□□□□ 0.23
CPSF7-201ENST00000340437 CSRNP2Q9H175 543 aa16.46■□□□□ 0.23
CPSF7-201ENST00000340437 SOWAHDA6NJG2 315 aa16.46■□□□□ 0.23
CPSF7-201ENST00000340437 CCT6AP40227 531 aaKnown RBP16.46■□□□□ 0.23
CPSF7-201ENST00000340437 LCORLQ8N3X6 602 aa16.46■□□□□ 0.23
CPSF7-201ENST00000340437 SPATA5Q8NB90 893 aa16.46■□□□□ 0.23
CPSF7-201ENST00000340437 L2HGDHQ9H9P8 463 aa16.46■□□□□ 0.23
CPSF7-201ENST00000340437 ZBTB1Q9Y2K1 713 aa16.46■□□□□ 0.23
CPSF7-201ENST00000340437 CYP2D7A0A087X1C5 515 aa16.46■□□□□ 0.22
CPSF7-201ENST00000340437 VWA3AA6NCI4 1184 aa16.46■□□□□ 0.22
CPSF7-201ENST00000340437 TOB1P50616 345 aaPredicted RBP16.46■□□□□ 0.22
CPSF7-201ENST00000340437 PIP4K2BP78356 416 aa16.46■□□□□ 0.22
CPSF7-201ENST00000340437 ZNF174Q15697 407 aa16.46■□□□□ 0.22
CPSF7-201ENST00000340437 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.46■□□□□ 0.22
CPSF7-201ENST00000340437 TMEM87BQ96K49 555 aa16.46■□□□□ 0.22
CPSF7-201ENST00000340437 HPSEQ9Y251 543 aa16.46■□□□□ 0.22
CPSF7-201ENST00000340437 NTRK3Q16288 839 aa16.45■□□□□ 0.22
CPSF7-201ENST00000340437 PPFIBP1Q86W92 1011 aa16.45■□□□□ 0.22
CPSF7-201ENST00000340437 NEK11Q8NG66 645 aa16.45■□□□□ 0.22
CPSF7-201ENST00000340437 RNF216Q9NWF9 866 aaPredicted RBP16.45■□□□□ 0.22
CPSF7-201ENST00000340437 RAI14Q9P0K7 980 aa16.45■□□□□ 0.22
CPSF7-201ENST00000340437 TACC3Q9Y6A5 838 aa16.45■□□□□ 0.22
CPSF7-201ENST00000340437 LAMA4Q16363 1823 aa16.45■□□□□ 0.22
CPSF7-201ENST00000340437 CPDO75976 1380 aa16.45■□□□□ 0.22
CPSF7-201ENST00000340437 TFRCP02786 760 aaKnown RBP16.45■□□□□ 0.22
CPSF7-201ENST00000340437 PPP2R3AQ06190 1150 aa16.45■□□□□ 0.22
CPSF7-201ENST00000340437 RASGRF1Q13972 1273 aa16.45■□□□□ 0.22
CPSF7-201ENST00000340437 ARHGAP6O43182 974 aa16.44■□□□□ 0.22
CPSF7-201ENST00000340437 AKNAD1Q5T1N1 836 aa16.44■□□□□ 0.22
CPSF7-201ENST00000340437 CCDC24Q8N4L8 307 aa16.44■□□□□ 0.22
CPSF7-201ENST00000340437 TIGD1Q96MW7 591 aa16.44■□□□□ 0.22
CPSF7-201ENST00000340437 BLZF1Q9H2G9 400 aa16.44■□□□□ 0.22
CPSF7-201ENST00000340437 FHOD1Q9Y613 1164 aa16.44■□□□□ 0.22
CPSF7-201ENST00000340437 PATL2C9JE40 543 aaKnown RBP16.44■□□□□ 0.22
CPSF7-201ENST00000340437 SPECC1LQ69YQ0 1117 aa16.44■□□□□ 0.22
CPSF7-201ENST00000340437 BAZ2BQ9UIF8 2168 aaKnown RBP16.44■□□□□ 0.22
CPSF7-201ENST00000340437 KCNQ4P56696 695 aa16.44■□□□□ 0.22
CPSF7-201ENST00000340437 CCDC93Q567U6 631 aa16.44■□□□□ 0.22
CPSF7-201ENST00000340437 GIGYF2Q6Y7W6 1299 aaKnown RBP16.44■□□□□ 0.22
CPSF7-201ENST00000340437 NACAP1Q9BZK3 213 aa16.44■□□□□ 0.22
CPSF7-201ENST00000340437 PARP3Q9Y6F1 533 aa16.44■□□□□ 0.22
CPSF7-201ENST00000340437 SLIT3O75094 1523 aa16.44■□□□□ 0.22
CPSF7-201ENST00000340437 H2AFXP16104 143 aaPredicted RBP16.43■□□□□ 0.22
CPSF7-201ENST00000340437 V9GY48 417 aaPredicted RBP16.43■□□□□ 0.22
CPSF7-201ENST00000340437 MMP1P03956 469 aa16.43■□□□□ 0.22
CPSF7-201ENST00000340437 CYP7A1P22680 504 aa16.43■□□□□ 0.22
CPSF7-201ENST00000340437 PLA2G4AP47712 749 aa16.43■□□□□ 0.22
CPSF7-201ENST00000340437 MCM6Q14566 821 aa16.43■□□□□ 0.22
CPSF7-201ENST00000340437 UBE3CQ15386 1083 aa16.43■□□□□ 0.22
CPSF7-201ENST00000340437 SKIDA1Q1XH10 827 aa16.43■□□□□ 0.22
CPSF7-201ENST00000340437 CADPS2Q86UW7 1296 aa16.43■□□□□ 0.22
CPSF7-201ENST00000340437 DZIP3Q86Y13 1208 aaKnown RBP16.43■□□□□ 0.22
CPSF7-201ENST00000340437 EEF2KMTQ96G04 330 aa16.43■□□□□ 0.22
CPSF7-201ENST00000340437 WDR17Q8IZU2 1322 aa16.43■□□□□ 0.22
CPSF7-201ENST00000340437 CSF1RP07333 972 aa16.42■□□□□ 0.22
CPSF7-201ENST00000340437 NOM1Q5C9Z4 860 aaKnown RBP16.42■□□□□ 0.22
CPSF7-201ENST00000340437 RASSF8Q8NHQ8 419 aa16.42■□□□□ 0.22
CPSF7-201ENST00000340437 JAG2Q9Y219 1238 aa16.42■□□□□ 0.22
CPSF7-201ENST00000340437 SLC5A1P13866 664 aa16.42■□□□□ 0.22
CPSF7-201ENST00000340437 CDC25AP30304 524 aa16.42■□□□□ 0.22
CPSF7-201ENST00000340437 IGSF22Q8N9C0 903 aa16.42■□□□□ 0.22
CPSF7-201ENST00000340437 WASF1Q92558 559 aa16.42■□□□□ 0.22
CPSF7-201ENST00000340437 MAP3K15Q6ZN16 1313 aa16.42■□□□□ 0.22
CPSF7-201ENST00000340437 WTIPA6NIX2 430 aaPredicted RBP16.42■□□□□ 0.22
CPSF7-201ENST00000340437 FMNL1O95466 1100 aaPredicted RBP16.42■□□□□ 0.22
CPSF7-201ENST00000340437 KIF4BQ2VIQ3 1234 aa16.42■□□□□ 0.22
CPSF7-201ENST00000340437 TC2NQ8N9U0 490 aa16.42■□□□□ 0.22
CPSF7-201ENST00000340437 MRPL44Q9H9J2 332 aaKnown RBP16.42■□□□□ 0.22
CPSF7-201ENST00000340437 GSG1L2A8MUP6 293 aa16.41■□□□□ 0.22
CPSF7-201ENST00000340437 TADA3O75528 432 aa16.41■□□□□ 0.22
CPSF7-201ENST00000340437 RHOXF2BP0C7M4 288 aa16.41■□□□□ 0.22
CPSF7-201ENST00000340437 PUM3Q15397 648 aaKnown RBP16.41■□□□□ 0.22
CPSF7-201ENST00000340437 ZNF569Q5MCW4 686 aa16.41■□□□□ 0.22
CPSF7-201ENST00000340437 RHOXF2Q9BQY4 288 aa16.41■□□□□ 0.22
CPSF7-201ENST00000340437 VPS16Q9H269 839 aa16.41■□□□□ 0.22
CPSF7-201ENST00000340437 SPATA31A3Q5VYP0 1347 aa16.41■□□□□ 0.22
CPSF7-201ENST00000340437 RBL2Q08999 1139 aa16.41■□□□□ 0.22
CPSF7-201ENST00000340437 ZNF654Q8IZM8 581 aa16.41■□□□□ 0.22
CPSF7-201ENST00000340437 FBXL16Q8N461 479 aa16.41■□□□□ 0.22
CPSF7-201ENST00000340437 PLIN2Q99541 437 aa16.41■□□□□ 0.22
CPSF7-201ENST00000340437 PHLPP2Q6ZVD8 1323 aa16.41■□□□□ 0.22
CPSF7-201ENST00000340437 CCDC66A2RUB6 948 aa16.41■□□□□ 0.22
CPSF7-201ENST00000340437 UQCRFS1P1P0C7P4 283 aa16.41■□□□□ 0.22
CPSF7-201ENST00000340437 FANCBQ8NB91 859 aa16.41■□□□□ 0.22
CPSF7-201ENST00000340437 FBXO2Q9UK22 296 aaPredicted RBP16.41■□□□□ 0.22
CPSF7-201ENST00000340437 OAS2P29728 719 aaKnown RBP16.4■□□□□ 0.22
CPSF7-201ENST00000340437 LPIN2Q92539 896 aa16.4■□□□□ 0.22
CPSF7-201ENST00000340437 PARD6BQ9BYG5 372 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms