RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 HSP90AA1P07900 732 aaKnown RBP8.42□□□□□ -1.06
NUP43-201ENST00000340413 CIAPIN1Q6FI81 312 aa8.42□□□□□ -1.06
NUP43-201ENST00000340413 SYNE3Q6ZMZ3 975 aa8.42□□□□□ -1.06
NUP43-201ENST00000340413 LARGE2Q8N3Y3 721 aa8.42□□□□□ -1.06
NUP43-201ENST00000340413 ZNF713Q8N859 430 aaPredicted RBP8.42□□□□□ -1.06
NUP43-201ENST00000340413 TMEM87AQ8NBN3 555 aa8.42□□□□□ -1.06
NUP43-201ENST00000340413 NEDD1Q8NHV4 660 aa8.42□□□□□ -1.06
NUP43-201ENST00000340413 SH3RF3Q8TEJ3 882 aaPredicted RBP8.42□□□□□ -1.06
NUP43-201ENST00000340413 JDP2Q8WYK2 163 aa8.42□□□□□ -1.06
NUP43-201ENST00000340413 AATFQ9NY61 560 aaKnown RBP eCLIP8.42□□□□□ -1.06
NUP43-201ENST00000340413 NEDD4P46934 1319 aa8.42□□□□□ -1.06
NUP43-201ENST00000340413 IGKV6D-41A0A0C4DH26 115 aa8.41□□□□□ -1.06
NUP43-201ENST00000340413 A0A0G2JLW4 131 aa8.41□□□□□ -1.06
NUP43-201ENST00000340413 ZBTB7AO95365 584 aa8.41□□□□□ -1.06
NUP43-201ENST00000340413 PDIA3P30101 505 aaKnown RBP8.41□□□□□ -1.06
NUP43-201ENST00000340413 DYNLL1P63167 89 aaKnown RBP8.41□□□□□ -1.06
NUP43-201ENST00000340413 AOC3Q16853 763 aa8.41□□□□□ -1.06
NUP43-201ENST00000340413 SLKQ9H2G2 1235 aaPredicted RBP8.41□□□□□ -1.06
NUP43-201ENST00000340413 SMC3Q9UQE7 1217 aa8.41□□□□□ -1.06
NUP43-201ENST00000340413 YDJCA8MPS7 323 aa8.41□□□□□ -1.06
NUP43-201ENST00000340413 ME3Q16798 604 aa8.41□□□□□ -1.06
NUP43-201ENST00000340413 SPDYE2Q495Y8 402 aa8.41□□□□□ -1.06
NUP43-201ENST00000340413 ZSCAN10Q96SZ4 725 aaPredicted RBP8.41□□□□□ -1.06
NUP43-201ENST00000340413 ZSCAN16Q9H4T2 348 aaPredicted RBP8.41□□□□□ -1.06
NUP43-201ENST00000340413 WTIPA6NIX2 430 aaPredicted RBP8.41□□□□□ -1.06
NUP43-201ENST00000340413 NFKBIEO00221 500 aa8.41□□□□□ -1.06
NUP43-201ENST00000340413 SKOR2Q2VWA4 1001 aaPredicted RBP8.41□□□□□ -1.06
NUP43-201ENST00000340413 UPF3BQ9BZI7 483 aaKnown RBP8.41□□□□□ -1.06
NUP43-201ENST00000340413 TMOD2Q9NZR1 351 aa8.41□□□□□ -1.06
NUP43-201ENST00000340413 WDHD1O75717 1129 aaPredicted RBP8.4□□□□□ -1.06
NUP43-201ENST00000340413 WTAPQ15007 396 aa8.4□□□□□ -1.06
NUP43-201ENST00000340413 CDC42EP5Q6NZY7 148 aa8.4□□□□□ -1.06
NUP43-201ENST00000340413 MIGA1Q8NAN2 632 aa8.4□□□□□ -1.06
NUP43-201ENST00000340413 FAM151AQ8WW52 585 aa8.4□□□□□ -1.06
NUP43-201ENST00000340413 SPDYE2BA6NHP3 402 aa8.4□□□□□ -1.06
NUP43-201ENST00000340413 RIMBP2O15034 1052 aa8.4□□□□□ -1.06
NUP43-201ENST00000340413 SPDYE6P0CI01 402 aa8.4□□□□□ -1.06
NUP43-201ENST00000340413 IFNAR1P17181 557 aa8.4□□□□□ -1.06
NUP43-201ENST00000340413 TNNI2P48788 182 aa8.4□□□□□ -1.06
NUP43-201ENST00000340413 EIF6P56537 245 aaKnown RBP8.4□□□□□ -1.06
NUP43-201ENST00000340413 TNFAIP1Q13829 316 aa8.4□□□□□ -1.06
NUP43-201ENST00000340413 TATDN1Q6P1N9 297 aa8.4□□□□□ -1.06
NUP43-201ENST00000340413 UBAC1Q9BSL1 405 aa8.4□□□□□ -1.06
NUP43-201ENST00000340413 PDGFDQ9GZP0 370 aaPredicted RBP8.4□□□□□ -1.06
NUP43-201ENST00000340413 IQSEC3Q9UPP2 1182 aaPredicted RBP8.4□□□□□ -1.06
NUP43-201ENST00000340413 DOCK1Q14185 1865 aa8.4□□□□□ -1.07
NUP43-201ENST00000340413 USP17L12C9JPN9 530 aa8.4□□□□□ -1.07
NUP43-201ENST00000340413 USP17L21D6R901 530 aa8.4□□□□□ -1.07
NUP43-201ENST00000340413 PRKAB2O43741 272 aa8.4□□□□□ -1.07
NUP43-201ENST00000340413 LMNB1P20700 586 aa8.4□□□□□ -1.07
NUP43-201ENST00000340413 ATAD5Q96QE3 1844 aa8.39□□□□□ -1.07
NUP43-201ENST00000340413 CCDC69A6NI79 296 aa8.39□□□□□ -1.07
NUP43-201ENST00000340413 KIF5BP33176 963 aa8.39□□□□□ -1.07
NUP43-201ENST00000340413 TMEM67Q5HYA8 995 aa8.39□□□□□ -1.07
NUP43-201ENST00000340413 APOA5Q6Q788 366 aa8.39□□□□□ -1.07
NUP43-201ENST00000340413 CYB5R4Q7L1T6 521 aa8.39□□□□□ -1.07
NUP43-201ENST00000340413 OGFOD1Q8N543 542 aa8.39□□□□□ -1.07
NUP43-201ENST00000340413 SH3GLB2Q9NR46 395 aa8.39□□□□□ -1.07
NUP43-201ENST00000340413 USP40Q9NVE5 1235 aa8.39□□□□□ -1.07
NUP43-201ENST00000340413 MCM9Q9NXL9 1143 aa8.39□□□□□ -1.07
NUP43-201ENST00000340413 ZSWIM5Q9P217 1185 aa8.39□□□□□ -1.07
NUP43-201ENST00000340413 PI4KBQ9UBF8 816 aa8.39□□□□□ -1.07
NUP43-201ENST00000340413 PPP1R1BQ9UD71 204 aaPredicted RBP8.39□□□□□ -1.07
NUP43-201ENST00000340413 UNCXA6NJT0 531 aa8.39□□□□□ -1.07
NUP43-201ENST00000340413 CHGBP05060 677 aa8.39□□□□□ -1.07
NUP43-201ENST00000340413 USP17L8P0C7I0 530 aa8.39□□□□□ -1.07
NUP43-201ENST00000340413 DOK7Q18PE1 504 aa8.39□□□□□ -1.07
NUP43-201ENST00000340413 BRF1Q92994 677 aa8.39□□□□□ -1.07
NUP43-201ENST00000340413 MKL1Q969V6 931 aa8.39□□□□□ -1.07
NUP43-201ENST00000340413 RNF26Q9BY78 433 aaPredicted RBP8.39□□□□□ -1.07
NUP43-201ENST00000340413 HPS5Q9UPZ3 1129 aa8.39□□□□□ -1.07
NUP43-201ENST00000340413 ATF5Q9Y2D1 282 aaPredicted RBP8.39□□□□□ -1.07
NUP43-201ENST00000340413 GOLGA6L22H0YM25 854 aa8.39□□□□□ -1.07
NUP43-201ENST00000340413 ZBTB43O43298 467 aa8.39□□□□□ -1.07
NUP43-201ENST00000340413 MYO1BO43795 1136 aa8.39□□□□□ -1.07
NUP43-201ENST00000340413 ST3GAL1Q11201 340 aa8.39□□□□□ -1.07
NUP43-201ENST00000340413 CATIPQ7Z7H3 387 aa8.39□□□□□ -1.07
NUP43-201ENST00000340413 GPC2Q8N158 579 aa8.39□□□□□ -1.07
NUP43-201ENST00000340413 NSUN7Q8NE18 718 aaKnown RBP8.39□□□□□ -1.07
NUP43-201ENST00000340413 DBNDD1Q9H9R9 158 aa8.39□□□□□ -1.07
NUP43-201ENST00000340413 MYH6P13533 1939 aa8.38□□□□□ -1.07
NUP43-201ENST00000340413 IFIT3O14879 490 aaKnown RBP8.38□□□□□ -1.07
NUP43-201ENST00000340413 FMNL1O95466 1100 aaPredicted RBP8.38□□□□□ -1.07
NUP43-201ENST00000340413 POLR3DP05423 398 aaPredicted RBP8.38□□□□□ -1.07
NUP43-201ENST00000340413 FGD1P98174 961 aa8.38□□□□□ -1.07
NUP43-201ENST00000340413 SLFNL1Q499Z3 407 aa8.38□□□□□ -1.07
NUP43-201ENST00000340413 GALNT17Q6IS24 598 aa8.38□□□□□ -1.07
NUP43-201ENST00000340413 SDR42E1Q8WUS8 393 aa8.38□□□□□ -1.07
NUP43-201ENST00000340413 TAF6LQ9Y6J9 622 aa8.38□□□□□ -1.07
NUP43-201ENST00000340413 ELP1O95163 1332 aa8.38□□□□□ -1.07
NUP43-201ENST00000340413 PSMD14O00487 310 aa8.38□□□□□ -1.07
NUP43-201ENST00000340413 ZSCAN22P10073 491 aaPredicted RBP8.38□□□□□ -1.07
NUP43-201ENST00000340413 GRM4Q14833 912 aa8.38□□□□□ -1.07
NUP43-201ENST00000340413 GRIK5Q16478 980 aa8.38□□□□□ -1.07
NUP43-201ENST00000340413 CFAP100Q494V2 611 aa8.38□□□□□ -1.07
NUP43-201ENST00000340413 APOBEC3FQ8IUX4 373 aaKnown RBP8.38□□□□□ -1.07
NUP43-201ENST00000340413 GPR101Q96P66 508 aaPredicted RBP8.38□□□□□ -1.07
NUP43-201ENST00000340413 NYAP2Q9P242 653 aa8.38□□□□□ -1.07
NUP43-201ENST00000340413 PNMA2Q9UL42 364 aa8.38□□□□□ -1.07
NUP43-201ENST00000340413 SLC12A7Q9Y666 1083 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms