RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 RIOK1Q9BRS2 568 aaKnown RBP17.72■□□□□ 0.43
ERCC1-203ENST00000340192 ECHDC1Q9NTX5 307 aa17.72■□□□□ 0.43
ERCC1-203ENST00000340192 PI4KBQ9UBF8 816 aa17.72■□□□□ 0.43
ERCC1-203ENST00000340192 SAP30BPQ9UHR5 308 aaKnown RBP17.72■□□□□ 0.43
ERCC1-203ENST00000340192 HERC5Q9UII4 1024 aaKnown RBP17.72■□□□□ 0.43
ERCC1-203ENST00000340192 PALD1Q9ULE6 856 aa17.72■□□□□ 0.43
ERCC1-203ENST00000340192 KCNH4Q9UQ05 1017 aa17.72■□□□□ 0.43
ERCC1-203ENST00000340192 DDX60LQ5H9U9 1706 aaKnown RBP17.72■□□□□ 0.43
ERCC1-203ENST00000340192 ZNF532Q9HCE3 1301 aa17.72■□□□□ 0.43
ERCC1-203ENST00000340192 NAV1Q8NEY1 1877 aa17.71■□□□□ 0.43
ERCC1-203ENST00000340192 MAGEB6P1A0A0J9YX57 407 aa17.71■□□□□ 0.43
ERCC1-203ENST00000340192 TCRBV5S4A2TA0A5A2 114 aa17.71■□□□□ 0.43
ERCC1-203ENST00000340192 BTBD19C9JJ37 291 aa17.71■□□□□ 0.43
ERCC1-203ENST00000340192 USP5P45974 858 aa17.71■□□□□ 0.43
ERCC1-203ENST00000340192 CTU1Q7Z7A3 348 aaKnown RBP17.71■□□□□ 0.43
ERCC1-203ENST00000340192 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.71■□□□□ 0.43
ERCC1-203ENST00000340192 ZHX2Q9Y6X8 837 aa17.71■□□□□ 0.43
ERCC1-203ENST00000340192 TAF1CQ15572 869 aaPredicted RBP17.7■□□□□ 0.42
ERCC1-203ENST00000340192 SLC4A8Q2Y0W8 1093 aa17.7■□□□□ 0.42
ERCC1-203ENST00000340192 GPATCH3Q96I76 525 aa17.7■□□□□ 0.42
ERCC1-203ENST00000340192 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.7■□□□□ 0.42
ERCC1-203ENST00000340192 CXCL11O14625 94 aa17.69■□□□□ 0.42
ERCC1-203ENST00000340192 MOGSQ13724 837 aa17.69■□□□□ 0.42
ERCC1-203ENST00000340192 RRP1BQ14684 758 aaKnown RBP17.69■□□□□ 0.42
ERCC1-203ENST00000340192 TSHZ3Q63HK5 1081 aa17.69■□□□□ 0.42
ERCC1-203ENST00000340192 METTL16Q86W50 562 aaKnown RBP17.69■□□□□ 0.42
ERCC1-203ENST00000340192 ZFYVE28Q9HCC9 887 aa17.69■□□□□ 0.42
ERCC1-203ENST00000340192 ZCCHC17Q9NP64 241 aaKnown RBP17.69■□□□□ 0.42
ERCC1-203ENST00000340192 AFG3L2Q9Y4W6 797 aa17.69■□□□□ 0.42
ERCC1-203ENST00000340192 HLA-DOAP06340 250 aa17.68■□□□□ 0.42
ERCC1-203ENST00000340192 ADD2P35612 726 aa17.68■□□□□ 0.42
ERCC1-203ENST00000340192 CAP2P40123 477 aa17.68■□□□□ 0.42
ERCC1-203ENST00000340192 SLFNL1Q499Z3 407 aa17.68■□□□□ 0.42
ERCC1-203ENST00000340192 CCDC84Q86UT8 332 aaPredicted RBP17.68■□□□□ 0.42
ERCC1-203ENST00000340192 FOXP4Q8IVH2 680 aaPredicted RBP17.68■□□□□ 0.42
ERCC1-203ENST00000340192 CRACR2BQ8N4Y2 399 aaPredicted RBP17.68■□□□□ 0.42
ERCC1-203ENST00000340192 TRIM34Q9BYJ4 488 aa17.68■□□□□ 0.42
ERCC1-203ENST00000340192 DNAJC18Q9H819 358 aa17.68■□□□□ 0.42
ERCC1-203ENST00000340192 A0A0G2JLL6 359 aaPredicted RBP17.67■□□□□ 0.42
ERCC1-203ENST00000340192 CHGBP05060 677 aa17.67■□□□□ 0.42
ERCC1-203ENST00000340192 HDAC1Q13547 482 aaPredicted RBP17.67■□□□□ 0.42
ERCC1-203ENST00000340192 AAMPQ13685 434 aa17.67■□□□□ 0.42
ERCC1-203ENST00000340192 PRRT2Q7Z6L0 340 aaPredicted RBP17.67■□□□□ 0.42
ERCC1-203ENST00000340192 ANKRD23Q86SG2 305 aa17.67■□□□□ 0.42
ERCC1-203ENST00000340192 CRNKL1Q9BZJ0 848 aaKnown RBP17.67■□□□□ 0.42
ERCC1-203ENST00000340192 HTTP42858 3142 aa17.66■□□□□ 0.42
ERCC1-203ENST00000340192 TRIM75PA6NK02 468 aa17.66■□□□□ 0.42
ERCC1-203ENST00000340192 PDHXO00330 501 aa17.66■□□□□ 0.42
ERCC1-203ENST00000340192 SP3Q02447 781 aa17.66■□□□□ 0.42
ERCC1-203ENST00000340192 LCORLQ8N3X6 602 aa17.66■□□□□ 0.42
ERCC1-203ENST00000340192 OTUD7AQ8TE49 926 aaPredicted RBP17.66■□□□□ 0.42
ERCC1-203ENST00000340192 ARMT1Q9H993 441 aa17.66■□□□□ 0.42
ERCC1-203ENST00000340192 SUPT16HQ9Y5B9 1047 aaKnown RBP17.66■□□□□ 0.42
ERCC1-203ENST00000340192 BAZ2AQ9UIF9 1905 aaKnown RBP17.65■□□□□ 0.42
ERCC1-203ENST00000340192 CCDC85CA6NKD9 419 aa17.65■□□□□ 0.42
ERCC1-203ENST00000340192 TLR2O60603 784 aa17.65■□□□□ 0.42
ERCC1-203ENST00000340192 MBD4O95243 580 aa17.65■□□□□ 0.42
ERCC1-203ENST00000340192 UBE3CQ15386 1083 aa17.65■□□□□ 0.42
ERCC1-203ENST00000340192 PKN2Q16513 984 aaKnown RBP17.65■□□□□ 0.42
ERCC1-203ENST00000340192 ZSCAN25Q6NSZ9 544 aa17.65■□□□□ 0.42
ERCC1-203ENST00000340192 GPAT2Q6NUI2 795 aa17.65■□□□□ 0.42
ERCC1-203ENST00000340192 FASTKD5Q7L8L6 764 aaKnown RBP17.65■□□□□ 0.42
ERCC1-203ENST00000340192 EXOC6Q8TAG9 804 aa17.65■□□□□ 0.42
ERCC1-203ENST00000340192 CD99L2Q8TCZ2 262 aa17.65■□□□□ 0.42
ERCC1-203ENST00000340192 GCC1Q96CN9 775 aa17.65■□□□□ 0.42
ERCC1-203ENST00000340192 ERO1AQ96HE7 468 aa17.65■□□□□ 0.42
ERCC1-203ENST00000340192 LOC285556D6RIA3 1793 aa17.65■□□□□ 0.42
ERCC1-203ENST00000340192 TTC41PQ6P2S7 1318 aa17.65■□□□□ 0.42
ERCC1-203ENST00000340192 CENPFP49454 3210 aa17.64■□□□□ 0.41
ERCC1-203ENST00000340192 JAG1P78504 1218 aa17.64■□□□□ 0.41
ERCC1-203ENST00000340192 ANKRD45Q5TZF3 282 aa17.64■□□□□ 0.41
ERCC1-203ENST00000340192 GADL1Q6ZQY3 521 aa17.64■□□□□ 0.41
ERCC1-203ENST00000340192 TTC6Q86TZ1 520 aa17.64■□□□□ 0.41
ERCC1-203ENST00000340192 SDR42E1Q8WUS8 393 aa17.64■□□□□ 0.41
ERCC1-203ENST00000340192 EHD4Q9H223 541 aa17.64■□□□□ 0.41
ERCC1-203ENST00000340192 ZBTB47Q9UFB7 747 aaPredicted RBP17.64■□□□□ 0.41
ERCC1-203ENST00000340192 SERPINB13Q9UIV8 391 aa17.64■□□□□ 0.41
ERCC1-203ENST00000340192 ZSWIM8A7E2V4 1837 aa17.63■□□□□ 0.41
ERCC1-203ENST00000340192 USP17L5A8MUK1 530 aa17.63■□□□□ 0.41
ERCC1-203ENST00000340192 GDF11O95390 407 aa17.63■□□□□ 0.41
ERCC1-203ENST00000340192 ASNSP08243 561 aa17.63■□□□□ 0.41
ERCC1-203ENST00000340192 MX1P20591 662 aa17.63■□□□□ 0.41
ERCC1-203ENST00000340192 PLCD1P51178 756 aa17.63■□□□□ 0.41
ERCC1-203ENST00000340192 SHROOM1Q2M3G4 852 aaPredicted RBP17.63■□□□□ 0.41
ERCC1-203ENST00000340192 KBTBD3Q8NAB2 608 aa17.63■□□□□ 0.41
ERCC1-203ENST00000340192 ZNF280CQ8ND82 737 aa17.63■□□□□ 0.41
ERCC1-203ENST00000340192 PI4K2BQ8TCG2 481 aa17.63■□□□□ 0.41
ERCC1-203ENST00000340192 TBC1D2Q9BYX2 928 aa17.63■□□□□ 0.41
ERCC1-203ENST00000340192 DCP1AQ9NPI6 582 aaPredicted RBP17.63■□□□□ 0.41
ERCC1-203ENST00000340192 MCM9Q9NXL9 1143 aa17.63■□□□□ 0.41
ERCC1-203ENST00000340192 ERC2O15083 957 aa17.62■□□□□ 0.41
ERCC1-203ENST00000340192 PRKAB2O43741 272 aa17.62■□□□□ 0.41
ERCC1-203ENST00000340192 POLR3DP05423 398 aaPredicted RBP17.62■□□□□ 0.41
ERCC1-203ENST00000340192 CAP1Q01518 475 aa17.62■□□□□ 0.41
ERCC1-203ENST00000340192 SPP2Q13103 211 aa17.62■□□□□ 0.41
ERCC1-203ENST00000340192 OTOP1Q7RTM1 612 aa17.62■□□□□ 0.41
ERCC1-203ENST00000340192 PUS7LQ9H0K6 701 aaKnown RBP17.62■□□□□ 0.41
ERCC1-203ENST00000340192 TRIM17Q9Y577 477 aa17.62■□□□□ 0.41
ERCC1-203ENST00000340192 MYH8P13535 1937 aa17.62■□□□□ 0.41
ERCC1-203ENST00000340192 GLRX3O76003 335 aaKnown RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms