RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 ZNF654Q8IZM8 581 aa12.6□□□□□ -0.39
SEMA4D-201ENST00000339861 CDC5LQ99459 802 aaKnown RBP12.6□□□□□ -0.39
SEMA4D-201ENST00000339861 CENPHQ9H3R5 247 aa12.6□□□□□ -0.39
SEMA4D-201ENST00000339861 MCM9Q9NXL9 1143 aa12.6□□□□□ -0.39
SEMA4D-201ENST00000339861 HEG1Q9ULI3 1381 aa12.6□□□□□ -0.39
SEMA4D-201ENST00000339861 DEXIO95424 95 aa12.59□□□□□ -0.39
SEMA4D-201ENST00000339861 EPS15P42566 896 aa12.59□□□□□ -0.39
SEMA4D-201ENST00000339861 UBXN1Q04323 297 aa12.59□□□□□ -0.39
SEMA4D-201ENST00000339861 ACBD3Q9H3P7 528 aa12.59□□□□□ -0.39
SEMA4D-201ENST00000339861 KAT14Q9H8E8 782 aa12.59□□□□□ -0.39
SEMA4D-201ENST00000339861 AATFQ9NY61 560 aaKnown RBP eCLIP12.59□□□□□ -0.39
SEMA4D-201ENST00000339861 PCDHB6Q9Y5E3 794 aa12.59□□□□□ -0.39
SEMA4D-201ENST00000339861 ITSN1Q15811 1721 aa12.59□□□□□ -0.39
SEMA4D-201ENST00000339861 PCCAP05165 728 aaPredicted RBP12.59□□□□□ -0.39
SEMA4D-201ENST00000339861 TRIM21P19474 475 aaKnown RBP12.59□□□□□ -0.39
SEMA4D-201ENST00000339861 ADD2P35612 726 aa12.59□□□□□ -0.39
SEMA4D-201ENST00000339861 DMTNQ08495 405 aa12.59□□□□□ -0.39
SEMA4D-201ENST00000339861 TSGA10IPQ3SY00 556 aa12.59□□□□□ -0.39
SEMA4D-201ENST00000339861 ZNF444Q8N0Y2 327 aaPredicted RBP12.59□□□□□ -0.39
SEMA4D-201ENST00000339861 JADE2Q9NQC1 790 aa12.59□□□□□ -0.39
SEMA4D-201ENST00000339861 PPP2R2CQ9Y2T4 447 aa12.59□□□□□ -0.39
SEMA4D-201ENST00000339861 PATL2C9JE40 543 aaKnown RBP12.59□□□□□ -0.39
SEMA4D-201ENST00000339861 CCDC181Q5TID7 509 aa12.59□□□□□ -0.39
SEMA4D-201ENST00000339861 TMTC2Q8N394 836 aa12.59□□□□□ -0.39
SEMA4D-201ENST00000339861 KRT18P05783 430 aaKnown RBP12.59□□□□□ -0.39
SEMA4D-201ENST00000339861 RBM6P78332 1123 aaKnown RBP12.59□□□□□ -0.39
SEMA4D-201ENST00000339861 KMT5BQ4FZB7 885 aa12.59□□□□□ -0.39
SEMA4D-201ENST00000339861 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.59□□□□□ -0.39
SEMA4D-201ENST00000339861 ANKARQ7Z5J8 1434 aa12.58□□□□□ -0.39
SEMA4D-201ENST00000339861 ERVV-2B6SEH9 535 aa12.58□□□□□ -0.4
SEMA4D-201ENST00000339861 ARHGAP6O43182 974 aa12.58□□□□□ -0.4
SEMA4D-201ENST00000339861 EIF3JO75822 258 aaKnown RBP12.58□□□□□ -0.4
SEMA4D-201ENST00000339861 RABL6Q3YEC7 729 aaPredicted RBP12.58□□□□□ -0.4
SEMA4D-201ENST00000339861 SPECC1LQ69YQ0 1117 aa12.58□□□□□ -0.4
SEMA4D-201ENST00000339861 ARMCX5Q6P1M9 558 aa12.58□□□□□ -0.4
SEMA4D-201ENST00000339861 LCORLQ8N3X6 602 aa12.58□□□□□ -0.4
SEMA4D-201ENST00000339861 DIP2AQ14689 1571 aa12.58□□□□□ -0.4
SEMA4D-201ENST00000339861 FAM170AA1A519 330 aa12.58□□□□□ -0.4
SEMA4D-201ENST00000339861 SLF1Q9BQI6 1058 aa12.58□□□□□ -0.4
SEMA4D-201ENST00000339861 CSRNP2Q9H175 543 aa12.58□□□□□ -0.4
SEMA4D-201ENST00000339861 NEDD4P46934 1319 aa12.58□□□□□ -0.4
SEMA4D-201ENST00000339861 GUCY1A2P33402 732 aa12.58□□□□□ -0.4
SEMA4D-201ENST00000339861 FANCBQ8NB91 859 aa12.58□□□□□ -0.4
SEMA4D-201ENST00000339861 TTLL11Q8NHH1 800 aa12.58□□□□□ -0.4
SEMA4D-201ENST00000339861 GOLGA1Q92805 767 aa12.58□□□□□ -0.4
SEMA4D-201ENST00000339861 EPSTI1Q96J88 318 aa12.58□□□□□ -0.4
SEMA4D-201ENST00000339861 VPS18Q9P253 973 aa12.58□□□□□ -0.4
SEMA4D-201ENST00000339861 TNKSO95271 1327 aa12.58□□□□□ -0.4
SEMA4D-201ENST00000339861 GOLGA6L9A6NEM1 432 aa12.57□□□□□ -0.4
SEMA4D-201ENST00000339861 CDC25BP30305 580 aa12.57□□□□□ -0.4
SEMA4D-201ENST00000339861 PIGBQ92521 554 aa12.57□□□□□ -0.4
SEMA4D-201ENST00000339861 GPR108Q9NPR9 543 aa12.57□□□□□ -0.4
SEMA4D-201ENST00000339861 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.57□□□□□ -0.4
SEMA4D-201ENST00000339861 SYNRGQ9UMZ2 1314 aa12.57□□□□□ -0.4
SEMA4D-201ENST00000339861 USP17L12C9JPN9 530 aa12.57□□□□□ -0.4
SEMA4D-201ENST00000339861 USP17L21D6R901 530 aa12.57□□□□□ -0.4
SEMA4D-201ENST00000339861 SH2B2O14492 632 aaPredicted RBP12.57□□□□□ -0.4
SEMA4D-201ENST00000339861 MB21D2Q8IYB1 491 aaPredicted RBP12.57□□□□□ -0.4
SEMA4D-201ENST00000339861 CCDC148Q8NFR7 591 aa12.57□□□□□ -0.4
SEMA4D-201ENST00000339861 NEK11Q8NG66 645 aa12.57□□□□□ -0.4
SEMA4D-201ENST00000339861 GIGYF2Q6Y7W6 1299 aaKnown RBP12.57□□□□□ -0.4
SEMA4D-201ENST00000339861 NLRP10Q86W26 655 aa12.57□□□□□ -0.4
SEMA4D-201ENST00000339861 DHX37Q8IY37 1157 aaKnown RBP12.57□□□□□ -0.4
SEMA4D-201ENST00000339861 KCNB2Q92953 911 aa12.57□□□□□ -0.4
SEMA4D-201ENST00000339861 PSMB7Q99436 277 aa12.57□□□□□ -0.4
SEMA4D-201ENST00000339861 RABEP2Q9H5N1 569 aa12.57□□□□□ -0.4
SEMA4D-201ENST00000339861 ZNF652Q9Y2D9 606 aa12.57□□□□□ -0.4
SEMA4D-201ENST00000339861 CTAGE9A4FU28 777 aa12.57□□□□□ -0.4
SEMA4D-201ENST00000339861 CCZ1BP86790 482 aa12.57□□□□□ -0.4
SEMA4D-201ENST00000339861 CCZ1P86791 482 aaPredicted RBP12.57□□□□□ -0.4
SEMA4D-201ENST00000339861 PPARAQ07869 468 aa12.57□□□□□ -0.4
SEMA4D-201ENST00000339861 RASGRF1Q13972 1273 aa12.57□□□□□ -0.4
SEMA4D-201ENST00000339861 TDRD12Q587J7 1177 aaKnown RBP12.57□□□□□ -0.4
SEMA4D-201ENST00000339861 OXER1Q8TDS5 423 aa12.57□□□□□ -0.4
SEMA4D-201ENST00000339861 PXDNLA1KZ92 1463 aa12.56□□□□□ -0.4
SEMA4D-201ENST00000339861 CTAGE15A4D2H0 777 aa12.56□□□□□ -0.4
SEMA4D-201ENST00000339861 CIAO1O76071 339 aa12.56□□□□□ -0.4
SEMA4D-201ENST00000339861 CTAGE8P0CG41 777 aa12.56□□□□□ -0.4
SEMA4D-201ENST00000339861 DYNLL1P63167 89 aaKnown RBP12.56□□□□□ -0.4
SEMA4D-201ENST00000339861 SHC4Q6S5L8 630 aa12.56□□□□□ -0.4
SEMA4D-201ENST00000339861 SARM1Q6SZW1 724 aa12.56□□□□□ -0.4
SEMA4D-201ENST00000339861 CTAGE6Q86UF2 777 aa12.56□□□□□ -0.4
SEMA4D-201ENST00000339861 CTAGE4Q8IX94 777 aa12.56□□□□□ -0.4
SEMA4D-201ENST00000339861 MLKLQ8NB16 471 aa12.56□□□□□ -0.4
SEMA4D-201ENST00000339861 CWC15Q9P013 229 aaKnown RBP12.56□□□□□ -0.4
SEMA4D-201ENST00000339861 DIP2BQ9P265 1576 aa12.56□□□□□ -0.4
SEMA4D-201ENST00000339861 ANTXR2P58335 489 aa12.56□□□□□ -0.4
SEMA4D-201ENST00000339861 PDE4BQ07343 736 aa12.56□□□□□ -0.4
SEMA4D-201ENST00000339861 TTC38Q5R3I4 469 aa12.56□□□□□ -0.4
SEMA4D-201ENST00000339861 RASGRP4Q8TDF6 673 aa12.56□□□□□ -0.4
SEMA4D-201ENST00000339861 CRACR2AQ9BSW2 395 aa12.56□□□□□ -0.4
SEMA4D-201ENST00000339861 SAP30BPQ9UHR5 308 aaKnown RBP12.56□□□□□ -0.4
SEMA4D-201ENST00000339861 SPATA31D1Q6ZQQ2 1576 aa12.56□□□□□ -0.4
SEMA4D-201ENST00000339861 F8W031 263 aaPredicted RBP12.56□□□□□ -0.4
SEMA4D-201ENST00000339861 PRR29P0C7W0 189 aa12.56□□□□□ -0.4
SEMA4D-201ENST00000339861 KRT9P35527 623 aa12.56□□□□□ -0.4
SEMA4D-201ENST00000339861 CLCN6P51797 869 aa12.56□□□□□ -0.4
SEMA4D-201ENST00000339861 GYS2P54840 703 aa12.56□□□□□ -0.4
SEMA4D-201ENST00000339861 E4F1Q66K89 784 aaPredicted RBP12.56□□□□□ -0.4
SEMA4D-201ENST00000339861 IQUBQ8NA54 791 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms