RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 CSPP1Q1MSJ5 1256 aa26.18■■□□□ 1.78
PDLIM2-203ENST00000339162 SBK1Q52WX2 424 aa26.18■■□□□ 1.78
PDLIM2-203ENST00000339162 L1TD1Q5T7N2 865 aaKnown RBP26.18■■□□□ 1.78
PDLIM2-203ENST00000339162 CMTR1Q8N1G2 835 aaKnown RBP26.18■■□□□ 1.78
PDLIM2-203ENST00000339162 ENAHQ8N8S7 591 aaPredicted RBP26.18■■□□□ 1.78
PDLIM2-203ENST00000339162 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.18■■□□□ 1.78
PDLIM2-203ENST00000339162 NMT2O60551 498 aa26.18■■□□□ 1.78
PDLIM2-203ENST00000339162 CCDC82Q8N4S0 544 aa26.18■■□□□ 1.78
PDLIM2-203ENST00000339162 DYNLL2Q96FJ2 89 aa26.18■■□□□ 1.78
PDLIM2-203ENST00000339162 SPATA32Q96LK8 384 aa26.18■■□□□ 1.78
PDLIM2-203ENST00000339162 SAP30BPQ9UHR5 308 aaKnown RBP26.18■■□□□ 1.78
PDLIM2-203ENST00000339162 FAM205AQ6ZU69 1335 aa26.18■■□□□ 1.78
PDLIM2-203ENST00000339162 G3V3G9 751 aa26.17■■□□□ 1.78
PDLIM2-203ENST00000339162 DCAF8Q5TAQ9 597 aa26.17■■□□□ 1.78
PDLIM2-203ENST00000339162 FTOQ9C0B1 505 aaKnown RBP eCLIP26.17■■□□□ 1.78
PDLIM2-203ENST00000339162 CPLX2Q6PUV4 134 aaKnown RBP26.16■■□□□ 1.78
PDLIM2-203ENST00000339162 ZNF654Q8IZM8 581 aa26.16■■□□□ 1.78
PDLIM2-203ENST00000339162 CERS5Q8N5B7 392 aa26.16■■□□□ 1.78
PDLIM2-203ENST00000339162 FBXO18Q8NFZ0 1043 aa26.16■■□□□ 1.78
PDLIM2-203ENST00000339162 DBNDD1Q9H9R9 158 aa26.16■■□□□ 1.78
PDLIM2-203ENST00000339162 GRPEL1Q9HAV7 217 aa26.16■■□□□ 1.78
PDLIM2-203ENST00000339162 GPR75-ASB3A0A0A6YYF3 556 aa26.16■■□□□ 1.78
PDLIM2-203ENST00000339162 CDKL5O76039 1030 aa26.16■■□□□ 1.78
PDLIM2-203ENST00000339162 ZNF445P59923 1031 aa26.16■■□□□ 1.78
PDLIM2-203ENST00000339162 C12orf60Q5U649 245 aa26.16■■□□□ 1.78
PDLIM2-203ENST00000339162 STYK1Q6J9G0 422 aa26.16■■□□□ 1.78
PDLIM2-203ENST00000339162 ILDR1Q86SU0 546 aaPredicted RBP26.16■■□□□ 1.78
PDLIM2-203ENST00000339162 TMTC2Q8N394 836 aa26.16■■□□□ 1.78
PDLIM2-203ENST00000339162 LEO1Q8WVC0 666 aaPredicted RBP26.16■■□□□ 1.78
PDLIM2-203ENST00000339162 KCNQ5Q9NR82 932 aa26.16■■□□□ 1.78
PDLIM2-203ENST00000339162 KIAA1551Q9HCM1 1747 aa26.16■■□□□ 1.78
PDLIM2-203ENST00000339162 IGSF3O75054 1194 aa26.15■■□□□ 1.78
PDLIM2-203ENST00000339162 IARSP41252 1262 aaKnown RBP26.15■■□□□ 1.78
PDLIM2-203ENST00000339162 IQCA1Q86XH1 822 aa26.15■■□□□ 1.78
PDLIM2-203ENST00000339162 MTA3Q9BTC8 594 aa26.15■■□□□ 1.78
PDLIM2-203ENST00000339162 SCAND2PQ9GZW5 306 aaPredicted RBP26.15■■□□□ 1.78
PDLIM2-203ENST00000339162 SLC3A2P08195 630 aaKnown RBP26.15■■□□□ 1.78
PDLIM2-203ENST00000339162 RTN1Q16799 776 aa26.15■■□□□ 1.78
PDLIM2-203ENST00000339162 ALG1Q9BT22 464 aa26.15■■□□□ 1.78
PDLIM2-203ENST00000339162 SLC26A6Q9BXS9 759 aa26.15■■□□□ 1.78
PDLIM2-203ENST00000339162 SLX4Q8IY92 1834 aa26.14■■□□□ 1.78
PDLIM2-203ENST00000339162 ORC4O43929 436 aa26.14■■□□□ 1.78
PDLIM2-203ENST00000339162 PCP11498 1178 aaKnown RBP26.14■■□□□ 1.78
PDLIM2-203ENST00000339162 PLCD1P51178 756 aa26.14■■□□□ 1.78
PDLIM2-203ENST00000339162 PDE4BQ07343 736 aa26.14■■□□□ 1.78
PDLIM2-203ENST00000339162 IFIT1BQ5T764 474 aaKnown RBP26.14■■□□□ 1.78
PDLIM2-203ENST00000339162 TEX11Q8IYF3 940 aa26.14■■□□□ 1.78
PDLIM2-203ENST00000339162 PANK2Q9BZ23 570 aa26.14■■□□□ 1.78
PDLIM2-203ENST00000339162 FANCBQ8NB91 859 aa26.13■■□□□ 1.77
PDLIM2-203ENST00000339162 POLR3DP05423 398 aaPredicted RBP26.12■■□□□ 1.77
PDLIM2-203ENST00000339162 MRE11P49959 708 aa26.12■■□□□ 1.77
PDLIM2-203ENST00000339162 RHBDL3P58872 404 aa26.12■■□□□ 1.77
PDLIM2-203ENST00000339162 DAGLAQ9Y4D2 1042 aa26.12■■□□□ 1.77
PDLIM2-203ENST00000339162 LAMB1P07942 1786 aa26.12■■□□□ 1.77
PDLIM2-203ENST00000339162 TSPY2A6NKD2 308 aa26.12■■□□□ 1.77
PDLIM2-203ENST00000339162 SLC44A5Q8NCS7 719 aa26.12■■□□□ 1.77
PDLIM2-203ENST00000339162 EYA3Q99504 573 aa26.12■■□□□ 1.77
PDLIM2-203ENST00000339162 ELP1O95163 1332 aa26.11■■□□□ 1.77
PDLIM2-203ENST00000339162 GUCY1A2P33402 732 aa26.11■■□□□ 1.77
PDLIM2-203ENST00000339162 SCNN1DP51172 638 aa26.11■■□□□ 1.77
PDLIM2-203ENST00000339162 FAM163AQ96GL9 167 aaPredicted RBP26.11■■□□□ 1.77
PDLIM2-203ENST00000339162 USP28Q96RU2 1077 aa26.11■■□□□ 1.77
PDLIM2-203ENST00000339162 TTF2Q9UNY4 1162 aaKnown RBP26.11■■□□□ 1.77
PDLIM2-203ENST00000339162 GAKO14976 1311 aa26.11■■□□□ 1.77
PDLIM2-203ENST00000339162 KIF28PB7ZC32 967 aa26.11■■□□□ 1.77
PDLIM2-203ENST00000339162 SSRP1Q08945 709 aaKnown RBP26.11■■□□□ 1.77
PDLIM2-203ENST00000339162 SLF2Q8IX21 1173 aa26.11■■□□□ 1.77
PDLIM2-203ENST00000339162 CNKSR1Q969H4 720 aa26.11■■□□□ 1.77
PDLIM2-203ENST00000339162 SYAP1Q96A49 352 aaPredicted RBP26.11■■□□□ 1.77
PDLIM2-203ENST00000339162 IFNAR1P17181 557 aa26.1■■□□□ 1.77
PDLIM2-203ENST00000339162 CFAP45Q9UL16 551 aa26.1■■□□□ 1.77
PDLIM2-203ENST00000339162 ISY1Q9ULR0 285 aaKnown RBP26.1■■□□□ 1.77
PDLIM2-203ENST00000339162 AMOTL1Q8IY63 956 aa26.1■■□□□ 1.77
PDLIM2-203ENST00000339162 FLT1P17948 1338 aa26.09■■□□□ 1.77
PDLIM2-203ENST00000339162 FMNL1O95466 1100 aaPredicted RBP26.09■■□□□ 1.77
PDLIM2-203ENST00000339162 TFAP4Q01664 338 aa26.09■■□□□ 1.77
PDLIM2-203ENST00000339162 KRT40Q6A162 431 aa26.09■■□□□ 1.77
PDLIM2-203ENST00000339162 PGBD1Q96JS3 809 aa26.09■■□□□ 1.77
PDLIM2-203ENST00000339162 MKNK2Q9HBH9 465 aa26.09■■□□□ 1.77
PDLIM2-203ENST00000339162 NID2Q14112 1375 aa26.09■■□□□ 1.77
PDLIM2-203ENST00000339162 GOLGA6L4A6NEF3 574 aa26.08■■□□□ 1.77
PDLIM2-203ENST00000339162 CATIPQ7Z7H3 387 aa26.08■■□□□ 1.77
PDLIM2-203ENST00000339162 NBPF11Q86T75 865 aa26.08■■□□□ 1.77
PDLIM2-203ENST00000339162 C7orf43Q8WVR3 580 aa26.08■■□□□ 1.77
PDLIM2-203ENST00000339162 PLCG2P16885 1265 aa26.07■■□□□ 1.76
PDLIM2-203ENST00000339162 LIG1P18858 919 aa26.07■■□□□ 1.76
PDLIM2-203ENST00000339162 KIF23Q02241 960 aaPredicted RBP26.07■■□□□ 1.76
PDLIM2-203ENST00000339162 PICALMQ13492 652 aa26.07■■□□□ 1.76
PDLIM2-203ENST00000339162 LRSAM1Q6UWE0 723 aa26.07■■□□□ 1.76
PDLIM2-203ENST00000339162 CRACR2BQ8N4Y2 399 aaPredicted RBP26.07■■□□□ 1.76
PDLIM2-203ENST00000339162 CCDC196A0A1B0GTZ2 297 aa26.07■■□□□ 1.76
PDLIM2-203ENST00000339162 C21orf2O43822 256 aa26.07■■□□□ 1.76
PDLIM2-203ENST00000339162 TROAPQ12815 778 aa26.07■■□□□ 1.76
PDLIM2-203ENST00000339162 AOC3Q16853 763 aa26.06■■□□□ 1.76
PDLIM2-203ENST00000339162 CCDC183Q5T5S1 534 aa26.06■■□□□ 1.76
PDLIM2-203ENST00000339162 PODNQ7Z5L7 613 aa26.06■■□□□ 1.76
PDLIM2-203ENST00000339162 CERS3Q8IU89 383 aa26.06■■□□□ 1.76
PDLIM2-203ENST00000339162 IL17RBQ9NRM6 502 aa26.06■■□□□ 1.76
PDLIM2-203ENST00000339162 NAV1Q8NEY1 1877 aa26.06■■□□□ 1.76
PDLIM2-203ENST00000339162 TRIM22Q8IYM9 498 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms