RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 TRIM47Q96LD4 638 aa16.37■□□□□ 0.21
NUDCD3-201ENST00000338427 SAP30BPQ9UHR5 308 aaKnown RBP16.37■□□□□ 0.21
NUDCD3-201ENST00000338427 PALD1Q9ULE6 856 aa16.37■□□□□ 0.21
NUDCD3-201ENST00000338427 FMNL1O95466 1100 aaPredicted RBP16.36■□□□□ 0.21
NUDCD3-201ENST00000338427 SPP2Q13103 211 aa16.36■□□□□ 0.21
NUDCD3-201ENST00000338427 KIF22Q14807 665 aa16.36■□□□□ 0.21
NUDCD3-201ENST00000338427 TREML2Q5T2D2 321 aa16.36■□□□□ 0.21
NUDCD3-201ENST00000338427 MIGA1Q8NAN2 632 aa16.36■□□□□ 0.21
NUDCD3-201ENST00000338427 IDH1O75874 414 aaKnown RBP16.35■□□□□ 0.21
NUDCD3-201ENST00000338427 BAG3O95817 575 aa16.35■□□□□ 0.21
NUDCD3-201ENST00000338427 BCRP11274 1271 aa16.35■□□□□ 0.21
NUDCD3-201ENST00000338427 OSBPP22059 807 aa16.35■□□□□ 0.21
NUDCD3-201ENST00000338427 CAP2P40123 477 aa16.35■□□□□ 0.21
NUDCD3-201ENST00000338427 ARHGEF6Q15052 776 aa16.35■□□□□ 0.21
NUDCD3-201ENST00000338427 SLC9C1Q4G0N8 1177 aa16.35■□□□□ 0.21
NUDCD3-201ENST00000338427 FASTKD5Q7L8L6 764 aaKnown RBP16.35■□□□□ 0.21
NUDCD3-201ENST00000338427 RHPN1Q8TCX5 695 aa16.35■□□□□ 0.21
NUDCD3-201ENST00000338427 ZNF333Q96JL9 665 aa16.35■□□□□ 0.21
NUDCD3-201ENST00000338427 NOL10Q9BSC4 688 aaKnown RBP16.35■□□□□ 0.21
NUDCD3-201ENST00000338427 ZBTB40Q9NUA8 1239 aa16.35■□□□□ 0.21
NUDCD3-201ENST00000338427 RCAN3Q9UKA8 241 aa16.35■□□□□ 0.21
NUDCD3-201ENST00000338427 DOCK2Q92608 1830 aa16.35■□□□□ 0.21
NUDCD3-201ENST00000338427 KIAA0100Q14667 2235 aaKnown RBP16.34■□□□□ 0.21
NUDCD3-201ENST00000338427 MAP4K4O95819 1239 aaPredicted RBP16.34■□□□□ 0.21
NUDCD3-201ENST00000338427 MTFR1Q15390 333 aa16.34■□□□□ 0.21
NUDCD3-201ENST00000338427 MAGEB6Q8N7X4 407 aa16.34■□□□□ 0.21
NUDCD3-201ENST00000338427 DNAJC18Q9H819 358 aa16.34■□□□□ 0.21
NUDCD3-201ENST00000338427 GABRQQ9UN88 632 aa16.34■□□□□ 0.21
NUDCD3-201ENST00000338427 SLFNL1Q499Z3 407 aa16.33■□□□□ 0.2
NUDCD3-201ENST00000338427 EDC3Q96F86 508 aaKnown RBP16.33■□□□□ 0.2
NUDCD3-201ENST00000338427 PI4KBQ9UBF8 816 aa16.33■□□□□ 0.2
NUDCD3-201ENST00000338427 SRRDQ9UH36 339 aa16.33■□□□□ 0.2
NUDCD3-201ENST00000338427 PEX10O60683 326 aa16.32■□□□□ 0.2
NUDCD3-201ENST00000338427 GDF11O95390 407 aa16.32■□□□□ 0.2
NUDCD3-201ENST00000338427 FLT1P17948 1338 aa16.32■□□□□ 0.2
NUDCD3-201ENST00000338427 HMGCS2P54868 508 aa16.32■□□□□ 0.2
NUDCD3-201ENST00000338427 PDE4DIPQ5VU43 2346 aa16.32■□□□□ 0.2
NUDCD3-201ENST00000338427 PHIPQ8WWQ0 1821 aa16.32■□□□□ 0.2
NUDCD3-201ENST00000338427 PARK7Q99497 189 aaKnown RBP16.32■□□□□ 0.2
NUDCD3-201ENST00000338427 TMEM106CQ9BVX2 250 aa16.32■□□□□ 0.2
NUDCD3-201ENST00000338427 USP17L5A8MUK1 530 aa16.31■□□□□ 0.2
NUDCD3-201ENST00000338427 EVX2Q03828 476 aa16.31■□□□□ 0.2
NUDCD3-201ENST00000338427 PRKCZQ05513 592 aa16.31■□□□□ 0.2
NUDCD3-201ENST00000338427 NBPF11Q86T75 865 aa16.31■□□□□ 0.2
NUDCD3-201ENST00000338427 ERC1Q8IUD2 1116 aa16.31■□□□□ 0.2
NUDCD3-201ENST00000338427 FOXP4Q8IVH2 680 aaPredicted RBP16.31■□□□□ 0.2
NUDCD3-201ENST00000338427 RPAP2Q8IXW5 612 aaPredicted RBP16.31■□□□□ 0.2
NUDCD3-201ENST00000338427 ZNF280CQ8ND82 737 aa16.31■□□□□ 0.2
NUDCD3-201ENST00000338427 MKI67P46013 3256 aaKnown RBP16.3■□□□□ 0.2
NUDCD3-201ENST00000338427 MS4A1P11836 297 aa16.3■□□□□ 0.2
NUDCD3-201ENST00000338427 PLCG2P16885 1265 aa16.3■□□□□ 0.2
NUDCD3-201ENST00000338427 ANKRD13CQ8N6S4 541 aa16.3■□□□□ 0.2
NUDCD3-201ENST00000338427 DDX19BQ9UMR2 479 aa16.3■□□□□ 0.2
NUDCD3-201ENST00000338427 AGTPBP1Q9UPW5 1226 aa16.3■□□□□ 0.2
NUDCD3-201ENST00000338427 DOCK1Q14185 1865 aa16.29■□□□□ 0.2
NUDCD3-201ENST00000338427 MYPNQ86TC9 1320 aa16.29■□□□□ 0.2
NUDCD3-201ENST00000338427 SMARCA5O60264 1052 aaPredicted RBP16.29■□□□□ 0.2
NUDCD3-201ENST00000338427 CHGBP05060 677 aa16.29■□□□□ 0.2
NUDCD3-201ENST00000338427 METTL16Q86W50 562 aaKnown RBP16.29■□□□□ 0.2
NUDCD3-201ENST00000338427 CRACR2BQ8N4Y2 399 aaPredicted RBP16.29■□□□□ 0.2
NUDCD3-201ENST00000338427 RAET1EQ8TD07 263 aa16.29■□□□□ 0.2
NUDCD3-201ENST00000338427 DHX36Q9H2U1 1008 aaKnown RBP16.29■□□□□ 0.2
NUDCD3-201ENST00000338427 HERC5Q9UII4 1024 aaKnown RBP16.29■□□□□ 0.2
NUDCD3-201ENST00000338427 BRCA2P51587 3418 aa16.29■□□□□ 0.2
NUDCD3-201ENST00000338427 SIPA1L1O43166 1804 aa16.29■□□□□ 0.2
NUDCD3-201ENST00000338427 GOLIM4O00461 696 aa16.28■□□□□ 0.2
NUDCD3-201ENST00000338427 HOXD10P28358 340 aa16.28■□□□□ 0.2
NUDCD3-201ENST00000338427 GRK4P32298 578 aa16.28■□□□□ 0.2
NUDCD3-201ENST00000338427 USP5P45974 858 aa16.28■□□□□ 0.2
NUDCD3-201ENST00000338427 MAP3K12Q12852 859 aa16.28■□□□□ 0.2
NUDCD3-201ENST00000338427 HSP90AB4PQ58FF6 505 aa16.28■□□□□ 0.2
NUDCD3-201ENST00000338427 CLASRPQ8N2M8 674 aaKnown RBP16.28■□□□□ 0.2
NUDCD3-201ENST00000338427 SMCR8Q8TEV9 937 aaPredicted RBP16.28■□□□□ 0.2
NUDCD3-201ENST00000338427 KIF1BPQ96EK5 621 aa16.28■□□□□ 0.2
NUDCD3-201ENST00000338427 DNAJC2Q99543 621 aaKnown RBP16.28■□□□□ 0.2
NUDCD3-201ENST00000338427 BOLA2Q9H3K6 86 aa16.28■□□□□ 0.2
NUDCD3-201ENST00000338427 PTPRFP10586 1907 aa16.27■□□□□ 0.2
NUDCD3-201ENST00000338427 CDK5RAP2Q96SN8 1893 aa16.27■□□□□ 0.2
NUDCD3-201ENST00000338427 GNRH1P01148 92 aa16.27■□□□□ 0.2
NUDCD3-201ENST00000338427 IFIT2P09913 472 aaKnown RBP16.27■□□□□ 0.2
NUDCD3-201ENST00000338427 FLT3LGP49771 235 aa16.27■□□□□ 0.2
NUDCD3-201ENST00000338427 PLCD1P51178 756 aa16.27■□□□□ 0.2
NUDCD3-201ENST00000338427 PRMT2P55345 433 aa16.27■□□□□ 0.2
NUDCD3-201ENST00000338427 FCGRTP55899 365 aa16.27■□□□□ 0.2
NUDCD3-201ENST00000338427 MTMR2Q13614 643 aa16.27■□□□□ 0.2
NUDCD3-201ENST00000338427 PRPF38BQ5VTL8 546 aaKnown RBP16.27■□□□□ 0.2
NUDCD3-201ENST00000338427 P2RX7Q99572 595 aaKnown RBP16.27■□□□□ 0.2
NUDCD3-201ENST00000338427 RIOK1Q9BRS2 568 aaKnown RBP16.27■□□□□ 0.2
NUDCD3-201ENST00000338427 WDR18Q9BV38 432 aa16.27■□□□□ 0.2
NUDCD3-201ENST00000338427 ASCC2Q9H1I8 757 aaPredicted RBP16.27■□□□□ 0.2
NUDCD3-201ENST00000338427 BIN2Q9UBW5 565 aaPredicted RBP16.27■□□□□ 0.2
NUDCD3-201ENST00000338427 SLC45A1Q9Y2W3 748 aa16.27■□□□□ 0.2
NUDCD3-201ENST00000338427 COL2A1P02458 1487 aaPredicted RBP16.27■□□□□ 0.19
NUDCD3-201ENST00000338427 DOCK3Q8IZD9 2030 aa16.26■□□□□ 0.19
NUDCD3-201ENST00000338427 ELNP15502 786 aa16.26■□□□□ 0.19
NUDCD3-201ENST00000338427 PDE6AP16499 860 aa16.26■□□□□ 0.19
NUDCD3-201ENST00000338427 SH3D19Q5HYK7 790 aa16.26■□□□□ 0.19
NUDCD3-201ENST00000338427 SLC9C2Q5TAH2 1124 aa16.26■□□□□ 0.19
NUDCD3-201ENST00000338427 PROCA1Q8NCQ7 364 aaPredicted RBP16.26■□□□□ 0.19
NUDCD3-201ENST00000338427 TRIM34Q9BYJ4 488 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms