RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 TAF1LQ8IZX4 1826 aa26.81■■□□□ 1.88
CLPTM1-201ENST00000337392 CPLX2Q6PUV4 134 aaKnown RBP26.81■■□□□ 1.88
CLPTM1-201ENST00000337392 SDF4Q9BRK5 362 aa26.81■■□□□ 1.88
CLPTM1-201ENST00000337392 POLR3EQ9NVU0 708 aa26.81■■□□□ 1.88
CLPTM1-201ENST00000337392 NHSQ6T4R5 1651 aa26.8■■□□□ 1.88
CLPTM1-201ENST00000337392 CDKL5O76039 1030 aa26.8■■□□□ 1.88
CLPTM1-201ENST00000337392 PLEKHA8P1O95397 391 aa26.8■■□□□ 1.88
CLPTM1-201ENST00000337392 AXDND1Q5T1B0 1012 aaPredicted RBP26.8■■□□□ 1.88
CLPTM1-201ENST00000337392 SPATA31A6Q5VVP1 1343 aa26.8■■□□□ 1.88
CLPTM1-201ENST00000337392 FAM205CA6NFA0 338 aa26.8■■□□□ 1.88
CLPTM1-201ENST00000337392 USP17L8P0C7I0 530 aa26.8■■□□□ 1.88
CLPTM1-201ENST00000337392 NBPF11Q86T75 865 aa26.8■■□□□ 1.88
CLPTM1-201ENST00000337392 GRIN1Q05586 938 aa26.79■■□□□ 1.88
CLPTM1-201ENST00000337392 SART3Q15020 963 aaKnown RBP26.79■■□□□ 1.88
CLPTM1-201ENST00000337392 SEC23AQ15436 765 aa26.79■■□□□ 1.88
CLPTM1-201ENST00000337392 BRAPQ7Z569 592 aa26.79■■□□□ 1.88
CLPTM1-201ENST00000337392 FANCBQ8NB91 859 aa26.79■■□□□ 1.88
CLPTM1-201ENST00000337392 DCP1AQ9NPI6 582 aaPredicted RBP26.79■■□□□ 1.88
CLPTM1-201ENST00000337392 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.79■■□□□ 1.88
CLPTM1-201ENST00000337392 FMNL1O95466 1100 aaPredicted RBP26.78■■□□□ 1.88
CLPTM1-201ENST00000337392 KCNF1Q9H3M0 494 aa26.78■■□□□ 1.88
CLPTM1-201ENST00000337392 TIAM2Q8IVF5 1701 aa26.78■■□□□ 1.88
CLPTM1-201ENST00000337392 PFKFB1P16118 471 aa26.78■■□□□ 1.88
CLPTM1-201ENST00000337392 ESR2Q92731 530 aa26.78■■□□□ 1.88
CLPTM1-201ENST00000337392 MTMR7Q9Y216 660 aa26.78■■□□□ 1.88
CLPTM1-201ENST00000337392 GYS1P13807 737 aa26.77■■□□□ 1.88
CLPTM1-201ENST00000337392 IFNAR1P17181 557 aa26.77■■□□□ 1.88
CLPTM1-201ENST00000337392 DYNLL2Q96FJ2 89 aa26.77■■□□□ 1.88
CLPTM1-201ENST00000337392 QTRT2Q9H974 415 aaKnown RBP26.77■■□□□ 1.88
CLPTM1-201ENST00000337392 ZNF831Q5JPB2 1677 aa26.77■■□□□ 1.88
CLPTM1-201ENST00000337392 RRP9O43818 475 aaKnown RBP26.77■■□□□ 1.88
CLPTM1-201ENST00000337392 TRIM29Q14134 588 aa26.77■■□□□ 1.88
CLPTM1-201ENST00000337392 NOM1Q5C9Z4 860 aaKnown RBP26.77■■□□□ 1.88
CLPTM1-201ENST00000337392 OLFM4Q6UX06 510 aa26.77■■□□□ 1.88
CLPTM1-201ENST00000337392 DIS3L2Q8IYB7 885 aaKnown RBP26.77■■□□□ 1.88
CLPTM1-201ENST00000337392 ZSCAN10Q96SZ4 725 aaPredicted RBP26.77■■□□□ 1.88
CLPTM1-201ENST00000337392 RNF41Q9H4P4 317 aaPredicted RBP26.77■■□□□ 1.88
CLPTM1-201ENST00000337392 VPS54Q9P1Q0 977 aa26.77■■□□□ 1.88
CLPTM1-201ENST00000337392 SBF2Q86WG5 1849 aa26.77■■□□□ 1.88
CLPTM1-201ENST00000337392 VEGFAP15692 232 aaPredicted RBP26.76■■□□□ 1.87
CLPTM1-201ENST00000337392 DZIP1Q86YF9 867 aaKnown RBP26.76■■□□□ 1.87
CLPTM1-201ENST00000337392 CRACR2BQ8N4Y2 399 aaPredicted RBP26.76■■□□□ 1.87
CLPTM1-201ENST00000337392 TRIM5Q9C035 493 aa26.76■■□□□ 1.87
CLPTM1-201ENST00000337392 ANKRD2Q9GZV1 360 aa26.76■■□□□ 1.87
CLPTM1-201ENST00000337392 COL24A1Q17RW2 1714 aa26.76■■□□□ 1.87
CLPTM1-201ENST00000337392 KCNG4Q8TDN1 519 aa26.76■■□□□ 1.87
CLPTM1-201ENST00000337392 MAP3K14Q99558 947 aa26.76■■□□□ 1.87
CLPTM1-201ENST00000337392 IRS2Q9Y4H2 1338 aa26.76■■□□□ 1.87
CLPTM1-201ENST00000337392 TOB1P50616 345 aaPredicted RBP26.75■■□□□ 1.87
CLPTM1-201ENST00000337392 SHC4Q6S5L8 630 aa26.75■■□□□ 1.87
CLPTM1-201ENST00000337392 ZNF202O95125 648 aa26.75■■□□□ 1.87
CLPTM1-201ENST00000337392 YEATS4O95619 227 aa26.75■■□□□ 1.87
CLPTM1-201ENST00000337392 PTGS1P23219 599 aa26.75■■□□□ 1.87
CLPTM1-201ENST00000337392 GPSM2P81274 684 aa26.75■■□□□ 1.87
CLPTM1-201ENST00000337392 GRAPQ13588 217 aa26.75■■□□□ 1.87
CLPTM1-201ENST00000337392 PTPAQ15257 358 aa26.75■■□□□ 1.87
CLPTM1-201ENST00000337392 DPCR1Q3MIW9 517 aa26.75■■□□□ 1.87
CLPTM1-201ENST00000337392 IFIT1BQ5T764 474 aaKnown RBP26.75■■□□□ 1.87
CLPTM1-201ENST00000337392 ATL3Q6DD88 541 aa26.75■■□□□ 1.87
CLPTM1-201ENST00000337392 GRAPLQ8TC17 118 aaPredicted RBP26.75■■□□□ 1.87
CLPTM1-201ENST00000337392 MCM9Q9NXL9 1143 aa26.75■■□□□ 1.87
CLPTM1-201ENST00000337392 R3HCC1Q9Y3T6 440 aaKnown RBP26.75■■□□□ 1.87
CLPTM1-201ENST00000337392 SLC39A14Q15043 492 aa26.74■■□□□ 1.87
CLPTM1-201ENST00000337392 IQCB1Q15051 598 aa26.74■■□□□ 1.87
CLPTM1-201ENST00000337392 EARS2Q5JPH6 523 aaKnown RBP26.74■■□□□ 1.87
CLPTM1-201ENST00000337392 PYCARDQ9ULZ3 195 aa26.74■■□□□ 1.87
CLPTM1-201ENST00000337392 ZNF500O60304 480 aaPredicted RBP26.74■■□□□ 1.87
CLPTM1-201ENST00000337392 SLC44A5Q8NCS7 719 aa26.74■■□□□ 1.87
CLPTM1-201ENST00000337392 LRMPQ12912 555 aa26.73■■□□□ 1.87
CLPTM1-201ENST00000337392 SH3RF3Q8TEJ3 882 aaPredicted RBP26.73■■□□□ 1.87
CLPTM1-201ENST00000337392 ADAMTS3O15072 1205 aa26.73■■□□□ 1.87
CLPTM1-201ENST00000337392 U2AF2P26368 475 aaKnown RBP eCLIP26.73■■□□□ 1.87
CLPTM1-201ENST00000337392 BRIP1Q9BX63 1249 aa26.73■■□□□ 1.87
CLPTM1-201ENST00000337392 ANAPC4Q9UJX5 808 aa26.73■■□□□ 1.87
CLPTM1-201ENST00000337392 SRCAPQ6ZRS2 3230 aa26.73■■□□□ 1.87
CLPTM1-201ENST00000337392 MMP1P03956 469 aa26.72■■□□□ 1.87
CLPTM1-201ENST00000337392 SERPINB2P05120 415 aa26.72■■□□□ 1.87
CLPTM1-201ENST00000337392 DRC7Q8IY82 874 aa26.72■■□□□ 1.87
CLPTM1-201ENST00000337392 V9GY48 417 aaPredicted RBP26.72■■□□□ 1.87
CLPTM1-201ENST00000337392 LY75O60449 1722 aa26.72■■□□□ 1.87
CLPTM1-201ENST00000337392 WNT7AO00755 349 aa26.72■■□□□ 1.87
CLPTM1-201ENST00000337392 DDR1Q08345 913 aa26.72■■□□□ 1.87
CLPTM1-201ENST00000337392 RASGRP2Q7LDG7 609 aa26.72■■□□□ 1.87
CLPTM1-201ENST00000337392 TRIM22Q8IYM9 498 aa26.72■■□□□ 1.87
CLPTM1-201ENST00000337392 RPGRQ92834 1020 aaKnown RBP26.72■■□□□ 1.87
CLPTM1-201ENST00000337392 BCL11BQ9C0K0 894 aaPredicted RBP26.72■■□□□ 1.87
CLPTM1-201ENST00000337392 SAP30BPQ9UHR5 308 aaKnown RBP26.72■■□□□ 1.87
CLPTM1-201ENST00000337392 PCDHB6Q9Y5E3 794 aa26.72■■□□□ 1.87
CLPTM1-201ENST00000337392 NOSTRINQ8IVI9 506 aa26.71■■□□□ 1.87
CLPTM1-201ENST00000337392 AOPEPQ8N6M6 819 aa26.71■■□□□ 1.87
CLPTM1-201ENST00000337392 TRPC5Q9UL62 973 aaPredicted RBP26.71■■□□□ 1.87
CLPTM1-201ENST00000337392 DUOX1Q9NRD9 1551 aa26.71■■□□□ 1.87
CLPTM1-201ENST00000337392 FOXN1O15353 648 aa26.71■■□□□ 1.87
CLPTM1-201ENST00000337392 UFL1O94874 794 aa26.71■■□□□ 1.87
CLPTM1-201ENST00000337392 OFD1O75665 1012 aa26.7■■□□□ 1.87
CLPTM1-201ENST00000337392 STX1AQ16623 288 aa26.7■■□□□ 1.87
CLPTM1-201ENST00000337392 DHX40Q8IX18 779 aaKnown RBP26.7■■□□□ 1.87
CLPTM1-201ENST00000337392 TDRD7Q8NHU6 1098 aaKnown RBP26.7■■□□□ 1.87
CLPTM1-201ENST00000337392 CRNKL1Q9BZJ0 848 aaKnown RBP26.7■■□□□ 1.87
CLPTM1-201ENST00000337392 A0A1W2PQ27 194 aa26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms