RNA–Protein interactions for RNA: ENST00000336596.6

EPHA3-201, Transcript of EPH receptor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA3, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-201ENST00000336596 VPS72Q15906 364 aa8.29□□□□□ -1.08
EPHA3-201ENST00000336596 CCDC102BQ68D86 513 aa8.29□□□□□ -1.08
EPHA3-201ENST00000336596 SLC16A10Q8TF71 515 aa8.29□□□□□ -1.08
EPHA3-201ENST00000336596 PPM1EQ8WY54 764 aa8.29□□□□□ -1.08
EPHA3-201ENST00000336596 FNBP1Q96RU3 617 aa8.29□□□□□ -1.08
EPHA3-201ENST00000336596 NEURL4Q96JN8 1562 aa8.29□□□□□ -1.08
EPHA3-201ENST00000336596 MRE11P49959 708 aa8.29□□□□□ -1.08
EPHA3-201ENST00000336596 NMIQ13287 307 aaPredicted RBP8.29□□□□□ -1.08
EPHA3-201ENST00000336596 MAP9Q49MG5 647 aa8.29□□□□□ -1.08
EPHA3-201ENST00000336596 MICU3Q86XE3 530 aa8.29□□□□□ -1.08
EPHA3-201ENST00000336596 MIGA1Q8NAN2 632 aa8.29□□□□□ -1.08
EPHA3-201ENST00000336596 COA7Q96BR5 231 aa8.29□□□□□ -1.08
EPHA3-201ENST00000336596 ESYT1Q9BSJ8 1104 aa8.29□□□□□ -1.08
EPHA3-201ENST00000336596 USP40Q9NVE5 1235 aa8.29□□□□□ -1.08
EPHA3-201ENST00000336596 MYO3AQ8NEV4 1616 aa8.29□□□□□ -1.08
EPHA3-201ENST00000336596 KLF18A0A0U1RQI7 1052 aa8.28□□□□□ -1.08
EPHA3-201ENST00000336596 ERVV-1B6SEH8 477 aa8.28□□□□□ -1.08
EPHA3-201ENST00000336596 CALUO43852 315 aaPredicted RBP8.28□□□□□ -1.08
EPHA3-201ENST00000336596 NEMFO60524 1076 aa8.28□□□□□ -1.08
EPHA3-201ENST00000336596 DPP9Q86TI2 863 aa8.28□□□□□ -1.08
EPHA3-201ENST00000336596 FRMD4BQ9Y2L6 1034 aa8.28□□□□□ -1.08
EPHA3-201ENST00000336596 PSMA7O14818 248 aa8.28□□□□□ -1.08
EPHA3-201ENST00000336596 STK10O94804 968 aaKnown RBP8.28□□□□□ -1.08
EPHA3-201ENST00000336596 SERPINB2P05120 415 aa8.28□□□□□ -1.08
EPHA3-201ENST00000336596 SLC1A4P43007 532 aa8.28□□□□□ -1.08
EPHA3-201ENST00000336596 YARSP54577 528 aaKnown RBP8.28□□□□□ -1.08
EPHA3-201ENST00000336596 PLEKHM2Q8IWE5 1019 aa8.28□□□□□ -1.08
EPHA3-201ENST00000336596 SLC10A4Q96EP9 437 aa8.28□□□□□ -1.08
EPHA3-201ENST00000336596 CDHR1Q96JP9 859 aa8.28□□□□□ -1.08
EPHA3-201ENST00000336596 NACA2Q9H009 215 aa8.28□□□□□ -1.08
EPHA3-201ENST00000336596 NRBP2Q9NSY0 501 aa8.28□□□□□ -1.08
EPHA3-201ENST00000336596 USP25Q9UHP3 1055 aa8.28□□□□□ -1.08
EPHA3-201ENST00000336596 CPS1P31327 1500 aa8.28□□□□□ -1.08
EPHA3-201ENST00000336596 IQGAP1P46940 1657 aa8.28□□□□□ -1.08
EPHA3-201ENST00000336596 KRT10P13645 584 aa8.28□□□□□ -1.08
EPHA3-201ENST00000336596 ECE1P42892 770 aa8.28□□□□□ -1.08
EPHA3-201ENST00000336596 ADCY7P51828 1080 aa8.28□□□□□ -1.08
EPHA3-201ENST00000336596 UBXN2AP68543 259 aa8.28□□□□□ -1.08
EPHA3-201ENST00000336596 TRPC3Q13507 836 aa8.28□□□□□ -1.08
EPHA3-201ENST00000336596 DHX36Q9H2U1 1008 aaKnown RBP8.28□□□□□ -1.08
EPHA3-201ENST00000336596 POTEB2H3BUK9 544 aa8.28□□□□□ -1.08
EPHA3-201ENST00000336596 TTLL5Q6EMB2 1281 aa8.28□□□□□ -1.08
EPHA3-201ENST00000336596 MLXIPQ9HAP2 919 aa8.28□□□□□ -1.08
EPHA3-201ENST00000336596 RASAL2Q9UJF2 1139 aa8.28□□□□□ -1.08
EPHA3-201ENST00000336596 TTF2Q9UNY4 1162 aaKnown RBP8.28□□□□□ -1.08
EPHA3-201ENST00000336596 RBM8AQ9Y5S9 174 aaKnown RBP8.28□□□□□ -1.08
EPHA3-201ENST00000336596 TRIM75PA6NK02 468 aa8.28□□□□□ -1.08
EPHA3-201ENST00000336596 PAFAH1B1P43034 410 aa8.28□□□□□ -1.08
EPHA3-201ENST00000336596 GCNAQ96QF7 691 aa8.28□□□□□ -1.08
EPHA3-201ENST00000336596 ADPGKQ9BRR6 497 aa8.28□□□□□ -1.08
EPHA3-201ENST00000336596 ATG3Q9NT62 314 aa8.28□□□□□ -1.08
EPHA3-201ENST00000336596 PNPLA6Q8IY17 1366 aa8.27□□□□□ -1.08
EPHA3-201ENST00000336596 GNAT1P11488 350 aa8.27□□□□□ -1.08
EPHA3-201ENST00000336596 ARID5AQ03989 594 aa8.27□□□□□ -1.08
EPHA3-201ENST00000336596 ABI1Q8IZP0 508 aa8.27□□□□□ -1.08
EPHA3-201ENST00000336596 ZNF713Q8N859 430 aaPredicted RBP8.27□□□□□ -1.08
EPHA3-201ENST00000336596 SHTN1A0MZ66 631 aa8.27□□□□□ -1.09
EPHA3-201ENST00000336596 hCG_1984214I3L0E3 225 aa8.27□□□□□ -1.09
EPHA3-201ENST00000336596 UBE4AQ14139 1066 aa8.27□□□□□ -1.09
EPHA3-201ENST00000336596 TDRD12Q587J7 1177 aaKnown RBP8.27□□□□□ -1.09
EPHA3-201ENST00000336596 BRAPQ7Z569 592 aa8.27□□□□□ -1.09
EPHA3-201ENST00000336596 TRMT2AQ8IZ69 625 aaKnown RBP8.27□□□□□ -1.09
EPHA3-201ENST00000336596 ALG1Q9BT22 464 aa8.27□□□□□ -1.09
EPHA3-201ENST00000336596 ZNF215Q9UL58 517 aaPredicted RBP8.27□□□□□ -1.09
EPHA3-201ENST00000336596 ARHGAP23Q9P227 1491 aa8.27□□□□□ -1.09
EPHA3-201ENST00000336596 ATP2A1O14983 1001 aa8.27□□□□□ -1.09
EPHA3-201ENST00000336596 ZNF521Q96K83 1311 aa8.27□□□□□ -1.09
EPHA3-201ENST00000336596 GSTTP1A0A1W2PQM5 241 aa8.27□□□□□ -1.09
EPHA3-201ENST00000336596 KIF5CO60282 957 aa8.27□□□□□ -1.09
EPHA3-201ENST00000336596 MARCKSP29966 332 aaPredicted RBP8.27□□□□□ -1.09
EPHA3-201ENST00000336596 DEKP35659 375 aaKnown RBP8.27□□□□□ -1.09
EPHA3-201ENST00000336596 USP8P40818 1118 aa8.27□□□□□ -1.09
EPHA3-201ENST00000336596 CCT2P78371 535 aaKnown RBP8.27□□□□□ -1.09
EPHA3-201ENST00000336596 ARHGEF16Q5VV41 709 aa8.27□□□□□ -1.09
EPHA3-201ENST00000336596 GALNT17Q6IS24 598 aa8.27□□□□□ -1.09
EPHA3-201ENST00000336596 MTERF4Q7Z6M4 381 aaKnown RBP8.27□□□□□ -1.09
EPHA3-201ENST00000336596 PRPF31Q8WWY3 499 aaKnown RBP8.27□□□□□ -1.09
EPHA3-201ENST00000336596 IKBKGQ9Y6K9 419 aa8.27□□□□□ -1.09
EPHA3-201ENST00000336596 KDM3AQ9Y4C1 1321 aa8.27□□□□□ -1.09
EPHA3-201ENST00000336596 FAM47CQ5HY64 1035 aa8.27□□□□□ -1.09
EPHA3-201ENST00000336596 CLEC4GQ6UXB4 293 aa8.27□□□□□ -1.09
EPHA3-201ENST00000336596 TYW5A2RUC4 315 aaKnown RBP8.26□□□□□ -1.09
EPHA3-201ENST00000336596 ARHGEF35A5YM69 484 aa8.26□□□□□ -1.09
EPHA3-201ENST00000336596 TLR3O15455 904 aaKnown RBP8.26□□□□□ -1.09
EPHA3-201ENST00000336596 PRPF40AO75400 957 aaKnown RBP8.26□□□□□ -1.09
EPHA3-201ENST00000336596 NFKBIAP25963 317 aa8.26□□□□□ -1.09
EPHA3-201ENST00000336596 HOXA7P31268 230 aaPredicted RBP8.26□□□□□ -1.09
EPHA3-201ENST00000336596 VWA3BQ502W6 1294 aa8.26□□□□□ -1.09
EPHA3-201ENST00000336596 MFSD14CQ5VZR4 134 aa8.26□□□□□ -1.09
EPHA3-201ENST00000336596 ATP8A2Q9NTI2 1148 aa8.26□□□□□ -1.09
EPHA3-201ENST00000336596 FBXO40Q9UH90 709 aa8.26□□□□□ -1.09
EPHA3-201ENST00000336596 ITSN1Q15811 1721 aa8.26□□□□□ -1.09
EPHA3-201ENST00000336596 F8W8V4 182 aa8.26□□□□□ -1.09
EPHA3-201ENST00000336596 SRGAP2BP0DMP2 458 aa8.26□□□□□ -1.09
EPHA3-201ENST00000336596 EPB41P11171 864 aaKnown RBP8.26□□□□□ -1.09
EPHA3-201ENST00000336596 MST1RQ04912 1400 aa8.26□□□□□ -1.09
EPHA3-201ENST00000336596 SREBF2Q12772 1141 aa8.26□□□□□ -1.09
EPHA3-201ENST00000336596 CFAP100Q494V2 611 aa8.26□□□□□ -1.09
EPHA3-201ENST00000336596 SPATA31A1Q5TZJ5 1347 aa8.26□□□□□ -1.09
EPHA3-201ENST00000336596 CTNNBL1Q8WYA6 563 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 207 ms