RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 PPP6R2O75170 966 aa15.65■□□□□ 0.1
SYNE3-201ENST00000334258 BMP6P22004 513 aa15.65■□□□□ 0.1
SYNE3-201ENST00000334258 FMR1Q06787 632 aaKnown RBP eCLIP15.65■□□□□ 0.1
SYNE3-201ENST00000334258 RABL6Q3YEC7 729 aaPredicted RBP15.65■□□□□ 0.1
SYNE3-201ENST00000334258 TTC39AQ5SRH9 613 aa15.65■□□□□ 0.1
SYNE3-201ENST00000334258 NBPF14Q5TI25 921 aa15.65■□□□□ 0.1
SYNE3-201ENST00000334258 NBPF10Q6P3W6 841 aaKnown RBP15.65■□□□□ 0.1
SYNE3-201ENST00000334258 NBPF15Q8N660 670 aa15.65■□□□□ 0.1
SYNE3-201ENST00000334258 PSD3Q9NYI0 1048 aa15.65■□□□□ 0.1
SYNE3-201ENST00000334258 PALLDQ8WX93 1383 aa15.65■□□□□ 0.1
SYNE3-201ENST00000334258 LRRC24Q50LG9 513 aa15.64■□□□□ 0.09
SYNE3-201ENST00000334258 RESP18Q5W5W9 173 aa15.64■□□□□ 0.09
SYNE3-201ENST00000334258 ABCB6Q9NP58 842 aa15.64■□□□□ 0.09
SYNE3-201ENST00000334258 DACH1Q9UI36 760 aa15.64■□□□□ 0.09
SYNE3-201ENST00000334258 XIRP1Q702N8 1843 aaKnown RBP15.64■□□□□ 0.09
SYNE3-201ENST00000334258 CDKL5O76039 1030 aa15.64■□□□□ 0.09
SYNE3-201ENST00000334258 TBX2Q13207 712 aaPredicted RBP15.64■□□□□ 0.09
SYNE3-201ENST00000334258 SMIM5Q71RC9 77 aa15.64■□□□□ 0.09
SYNE3-201ENST00000334258 BANK1Q8NDB2 785 aa15.64■□□□□ 0.09
SYNE3-201ENST00000334258 CDC23Q9UJX2 597 aa15.64■□□□□ 0.09
SYNE3-201ENST00000334258 DCCP43146 1447 aa15.64■□□□□ 0.09
SYNE3-201ENST00000334258 HEG1Q9ULI3 1381 aa15.63■□□□□ 0.09
SYNE3-201ENST00000334258 ANKRD65E5RJM6 399 aa15.63■□□□□ 0.09
SYNE3-201ENST00000334258 POLR2DO15514 142 aaKnown RBP15.63■□□□□ 0.09
SYNE3-201ENST00000334258 BEND6Q5SZJ8 279 aaPredicted RBP15.63■□□□□ 0.09
SYNE3-201ENST00000334258 EFCC1Q9HA90 598 aa15.63■□□□□ 0.09
SYNE3-201ENST00000334258 MAN1B1Q9UKM7 699 aa15.63■□□□□ 0.09
SYNE3-201ENST00000334258 ALS2Q96Q42 1657 aa15.63■□□□□ 0.09
SYNE3-201ENST00000334258 POTEB2H3BUK9 544 aa15.63■□□□□ 0.09
SYNE3-201ENST00000334258 MAP2K7O14733 419 aa15.63■□□□□ 0.09
SYNE3-201ENST00000334258 IL15P40933 162 aaPredicted RBP15.63■□□□□ 0.09
SYNE3-201ENST00000334258 POSTNQ15063 836 aa15.63■□□□□ 0.09
SYNE3-201ENST00000334258 GRAMD1CQ8IYS0 662 aa15.63■□□□□ 0.09
SYNE3-201ENST00000334258 KRI1Q8N9T8 703 aaKnown RBP15.63■□□□□ 0.09
SYNE3-201ENST00000334258 PNKPQ96T60 521 aa15.63■□□□□ 0.09
SYNE3-201ENST00000334258 CEP126Q9P2H0 1117 aa15.63■□□□□ 0.09
SYNE3-201ENST00000334258 CTAGE9A4FU28 777 aa15.63■□□□□ 0.09
SYNE3-201ENST00000334258 IARSP41252 1262 aaKnown RBP15.63■□□□□ 0.09
SYNE3-201ENST00000334258 STX17P56962 302 aa15.63■□□□□ 0.09
SYNE3-201ENST00000334258 ANTXR2P58335 489 aa15.63■□□□□ 0.09
SYNE3-201ENST00000334258 PTPAQ15257 358 aa15.63■□□□□ 0.09
SYNE3-201ENST00000334258 MB21D2Q8IYB1 491 aaPredicted RBP15.63■□□□□ 0.09
SYNE3-201ENST00000334258 TMOD3Q9NYL9 352 aa15.63■□□□□ 0.09
SYNE3-201ENST00000334258 A0A0U1RQJ8 604 aa15.62■□□□□ 0.09
SYNE3-201ENST00000334258 TFRCP02786 760 aaKnown RBP15.62■□□□□ 0.09
SYNE3-201ENST00000334258 FOXR1Q6PIV2 292 aa15.62■□□□□ 0.09
SYNE3-201ENST00000334258 ATG9AQ7Z3C6 839 aa15.62■□□□□ 0.09
SYNE3-201ENST00000334258 SYNE4Q8N205 404 aa15.62■□□□□ 0.09
SYNE3-201ENST00000334258 IGSF22Q8N9C0 903 aa15.62■□□□□ 0.09
SYNE3-201ENST00000334258 MLKLQ8NB16 471 aa15.62■□□□□ 0.09
SYNE3-201ENST00000334258 ATRIPQ8WXE1 791 aa15.62■□□□□ 0.09
SYNE3-201ENST00000334258 YY1AP1Q9H869 796 aa15.62■□□□□ 0.09
SYNE3-201ENST00000334258 ANKZF1Q9H8Y5 726 aa15.62■□□□□ 0.09
SYNE3-201ENST00000334258 GPTP24298 496 aa15.62■□□□□ 0.09
SYNE3-201ENST00000334258 DNAJC10Q8IXB1 793 aa15.62■□□□□ 0.09
SYNE3-201ENST00000334258 PIGBQ92521 554 aa15.62■□□□□ 0.09
SYNE3-201ENST00000334258 SERTAD1Q9UHV2 236 aa15.62■□□□□ 0.09
SYNE3-201ENST00000334258 ABCC6O95255 1503 aa15.62■□□□□ 0.09
SYNE3-201ENST00000334258 CTAGE15A4D2H0 777 aa15.62■□□□□ 0.09
SYNE3-201ENST00000334258 CTAGE8P0CG41 777 aa15.62■□□□□ 0.09
SYNE3-201ENST00000334258 CTAGE6Q86UF2 777 aa15.62■□□□□ 0.09
SYNE3-201ENST00000334258 CTAGE4Q8IX94 777 aa15.62■□□□□ 0.09
SYNE3-201ENST00000334258 MYL10Q9BUA6 226 aa15.62■□□□□ 0.09
SYNE3-201ENST00000334258 ADGRG1Q9Y653 693 aa15.62■□□□□ 0.09
SYNE3-201ENST00000334258 PCDH11XQ9BZA7 1347 aa15.61■□□□□ 0.09
SYNE3-201ENST00000334258 PCDH11YQ9BZA8 1340 aa15.61■□□□□ 0.09
SYNE3-201ENST00000334258 ZNF622Q969S3 477 aaKnown RBP eCLIP15.61■□□□□ 0.09
SYNE3-201ENST00000334258 CARD10Q9BWT7 1032 aa15.61■□□□□ 0.09
SYNE3-201ENST00000334258 ANGEL1Q9UNK9 670 aaKnown RBP15.61■□□□□ 0.09
SYNE3-201ENST00000334258 TEX33O43247 280 aa15.61■□□□□ 0.09
SYNE3-201ENST00000334258 RBL2Q08999 1139 aa15.61■□□□□ 0.09
SYNE3-201ENST00000334258 SAFBQ15424 915 aaKnown RBP eCLIP15.61■□□□□ 0.09
SYNE3-201ENST00000334258 RAD9BQ6WBX8 426 aa15.61■□□□□ 0.09
SYNE3-201ENST00000334258 CCDC82Q8N4S0 544 aa15.61■□□□□ 0.09
SYNE3-201ENST00000334258 ENOX1Q8TC92 643 aaKnown RBP15.61■□□□□ 0.09
SYNE3-201ENST00000334258 SLC26A6Q9BXS9 759 aa15.61■□□□□ 0.09
SYNE3-201ENST00000334258 DENND2AQ9ULE3 1009 aa15.61■□□□□ 0.09
SYNE3-201ENST00000334258 KIF1AQ12756 1690 aa15.61■□□□□ 0.09
SYNE3-201ENST00000334258 EYA2O00167 538 aa15.6■□□□□ 0.09
SYNE3-201ENST00000334258 CASP8Q14790 479 aa15.6■□□□□ 0.09
SYNE3-201ENST00000334258 CT47A1Q5JQC4 288 aaPredicted RBP15.6■□□□□ 0.09
SYNE3-201ENST00000334258 PUS7LQ9H0K6 701 aaKnown RBP15.6■□□□□ 0.09
SYNE3-201ENST00000334258 ACBD3Q9H3P7 528 aa15.6■□□□□ 0.09
SYNE3-201ENST00000334258 PLEKHA4Q9H4M7 779 aa15.6■□□□□ 0.09
SYNE3-201ENST00000334258 COL5A2P05997 1499 aaPredicted RBP15.6■□□□□ 0.09
SYNE3-201ENST00000334258 VSNL1P62760 191 aa15.6■□□□□ 0.09
SYNE3-201ENST00000334258 SLC35F6Q8N357 371 aa15.6■□□□□ 0.09
SYNE3-201ENST00000334258 FBXL16Q8N461 479 aa15.6■□□□□ 0.09
SYNE3-201ENST00000334258 CDC5LQ99459 802 aaKnown RBP15.6■□□□□ 0.09
SYNE3-201ENST00000334258 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.6■□□□□ 0.09
SYNE3-201ENST00000334258 PUS3Q9BZE2 481 aaKnown RBP15.6■□□□□ 0.09
SYNE3-201ENST00000334258 GBP3Q9H0R5 595 aa15.6■□□□□ 0.09
SYNE3-201ENST00000334258 L1RE1Q9UN81 338 aa15.6■□□□□ 0.09
SYNE3-201ENST00000334258 AKAP17AQ02040 695 aaKnown RBP15.6■□□□□ 0.09
SYNE3-201ENST00000334258 TTC31Q49AM3 519 aaPredicted RBP15.6■□□□□ 0.09
SYNE3-201ENST00000334258 HNRNPLLQ8WVV9 542 aaKnown RBP15.6■□□□□ 0.09
SYNE3-201ENST00000334258 MAP3K14Q99558 947 aa15.6■□□□□ 0.09
SYNE3-201ENST00000334258 GOLGA8AA7E2F4 631 aa15.59■□□□□ 0.09
SYNE3-201ENST00000334258 UBAP1LF5GYI3 381 aa15.59■□□□□ 0.09
SYNE3-201ENST00000334258 GPAA1O43292 621 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms