RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 APPP05067 770 aa10.26□□□□□ -0.77
LSAMP-201ENST00000333617 MCM5P33992 734 aa10.26□□□□□ -0.77
LSAMP-201ENST00000333617 RFC4P35249 363 aa10.26□□□□□ -0.77
LSAMP-201ENST00000333617 APOBRQ0VD83 1088 aa10.26□□□□□ -0.77
LSAMP-201ENST00000333617 SCRN1Q12765 414 aa10.26□□□□□ -0.77
LSAMP-201ENST00000333617 CSPP1Q1MSJ5 1256 aa10.26□□□□□ -0.77
LSAMP-201ENST00000333617 PUS10Q3MIT2 529 aaKnown RBP10.26□□□□□ -0.77
LSAMP-201ENST00000333617 TRAPPC3LQ5T215 181 aa10.26□□□□□ -0.77
LSAMP-201ENST00000333617 RALYLQ86SE5 291 aaKnown RBP10.26□□□□□ -0.77
LSAMP-201ENST00000333617 GAS2L3Q86XJ1 694 aa10.26□□□□□ -0.77
LSAMP-201ENST00000333617 NCOA7Q8NI08 942 aa10.26□□□□□ -0.77
LSAMP-201ENST00000333617 CHMP4CQ96CF2 233 aa10.26□□□□□ -0.77
LSAMP-201ENST00000333617 MINPP1Q9UNW1 487 aa10.26□□□□□ -0.77
LSAMP-201ENST00000333617 CNPY2Q9Y2B0 182 aa10.26□□□□□ -0.77
LSAMP-201ENST00000333617 TIAM2Q8IVF5 1701 aa10.26□□□□□ -0.77
LSAMP-201ENST00000333617 LAMB1P07942 1786 aa10.25□□□□□ -0.77
LSAMP-201ENST00000333617 JAK2O60674 1132 aa10.25□□□□□ -0.77
LSAMP-201ENST00000333617 GADD45BO75293 160 aaPredicted RBP10.25□□□□□ -0.77
LSAMP-201ENST00000333617 GCGRP47871 477 aa10.25□□□□□ -0.77
LSAMP-201ENST00000333617 CAVIN4Q5BKX8 364 aa10.25□□□□□ -0.77
LSAMP-201ENST00000333617 FAM196AQ6ZSG2 479 aa10.25□□□□□ -0.77
LSAMP-201ENST00000333617 CDC37L1Q7L3B6 337 aa10.25□□□□□ -0.77
LSAMP-201ENST00000333617 CHST3Q7LGC8 479 aa10.25□□□□□ -0.77
LSAMP-201ENST00000333617 AMIGO3Q86WK7 504 aa10.25□□□□□ -0.77
LSAMP-201ENST00000333617 MB21D2Q8IYB1 491 aaPredicted RBP10.25□□□□□ -0.77
LSAMP-201ENST00000333617 FAM184AQ8NB25 1140 aa10.25□□□□□ -0.77
LSAMP-201ENST00000333617 SMARCC2Q8TAQ2 1214 aa10.25□□□□□ -0.77
LSAMP-201ENST00000333617 CELF1Q92879 486 aaKnown RBP10.25□□□□□ -0.77
LSAMP-201ENST00000333617 SYAP1Q96A49 352 aaPredicted RBP10.25□□□□□ -0.77
LSAMP-201ENST00000333617 ZNF274Q96GC6 653 aaPredicted RBP10.25□□□□□ -0.77
LSAMP-201ENST00000333617 STRBPQ96SI9 672 aaKnown RBP10.25□□□□□ -0.77
LSAMP-201ENST00000333617 NSFL1CQ9UNZ2 370 aaKnown RBP10.25□□□□□ -0.77
LSAMP-201ENST00000333617 ZNF804BA4D1E1 1349 aa10.24□□□□□ -0.77
LSAMP-201ENST00000333617 ZMYM6O95789 1325 aa10.24□□□□□ -0.77
LSAMP-201ENST00000333617 WDR19Q8NEZ3 1342 aa10.24□□□□□ -0.77
LSAMP-201ENST00000333617 PATL2C9JE40 543 aaKnown RBP10.24□□□□□ -0.77
LSAMP-201ENST00000333617 NPHP1O15259 732 aa10.24□□□□□ -0.77
LSAMP-201ENST00000333617 FIBPO43427 364 aa10.24□□□□□ -0.77
LSAMP-201ENST00000333617 PRC1O43663 620 aa10.24□□□□□ -0.77
LSAMP-201ENST00000333617 GFRA3O60609 400 aa10.24□□□□□ -0.77
LSAMP-201ENST00000333617 S1PR4O95977 384 aa10.24□□□□□ -0.77
LSAMP-201ENST00000333617 RPS8P62241 208 aaKnown RBP10.24□□□□□ -0.77
LSAMP-201ENST00000333617 TRDNQ13061 729 aa10.24□□□□□ -0.77
LSAMP-201ENST00000333617 ALX1Q15699 326 aa10.24□□□□□ -0.77
LSAMP-201ENST00000333617 QTRT2Q9H974 415 aaKnown RBP10.24□□□□□ -0.77
LSAMP-201ENST00000333617 TMEM63CQ9P1W3 806 aa10.24□□□□□ -0.77
LSAMP-201ENST00000333617 LRP2BPQ9P2M1 347 aa10.24□□□□□ -0.77
LSAMP-201ENST00000333617 NAP1L2Q9ULW6 460 aaPredicted RBP10.24□□□□□ -0.77
LSAMP-201ENST00000333617 CARMIL3Q8ND23 1372 aa10.24□□□□□ -0.77
LSAMP-201ENST00000333617 CDK5RAP2Q96SN8 1893 aa10.23□□□□□ -0.77
LSAMP-201ENST00000333617 MBD4O95243 580 aa10.23□□□□□ -0.77
LSAMP-201ENST00000333617 GNAT2P19087 354 aa10.23□□□□□ -0.77
LSAMP-201ENST00000333617 PDIA3P30101 505 aaKnown RBP10.23□□□□□ -0.77
LSAMP-201ENST00000333617 GYG1P46976 350 aa10.23□□□□□ -0.77
LSAMP-201ENST00000333617 EVCP57679 992 aa10.23□□□□□ -0.77
LSAMP-201ENST00000333617 UBE2HP62256 183 aa10.23□□□□□ -0.77
LSAMP-201ENST00000333617 CCT2P78371 535 aaKnown RBP10.23□□□□□ -0.77
LSAMP-201ENST00000333617 HMGN5P82970 282 aaKnown RBP10.23□□□□□ -0.77
LSAMP-201ENST00000333617 DNM1Q05193 864 aaKnown RBP10.23□□□□□ -0.77
LSAMP-201ENST00000333617 VPS37DQ86XT2 251 aa10.23□□□□□ -0.77
LSAMP-201ENST00000333617 ANKLE1Q8NAG6 615 aa10.23□□□□□ -0.77
LSAMP-201ENST00000333617 NSUN7Q8NE18 718 aaKnown RBP10.23□□□□□ -0.77
LSAMP-201ENST00000333617 DDX11Q96FC9 970 aa10.23□□□□□ -0.77
LSAMP-201ENST00000333617 ANKRD2Q9GZV1 360 aa10.23□□□□□ -0.77
LSAMP-201ENST00000333617 KIF3AQ9Y496 699 aa10.23□□□□□ -0.77
LSAMP-201ENST00000333617 DLEC1Q9Y238 1755 aa10.23□□□□□ -0.77
LSAMP-201ENST00000333617 PNPLA7Q6ZV29 1317 aa10.23□□□□□ -0.77
LSAMP-201ENST00000333617 H3BQV1 296 aa10.22□□□□□ -0.77
LSAMP-201ENST00000333617 KRT85P78386 507 aa10.22□□□□□ -0.77
LSAMP-201ENST00000333617 FUT2Q10981 343 aa10.22□□□□□ -0.77
LSAMP-201ENST00000333617 MORN1Q5T089 497 aa10.22□□□□□ -0.77
LSAMP-201ENST00000333617 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.22□□□□□ -0.77
LSAMP-201ENST00000333617 FERMT3Q86UX7 667 aa10.22□□□□□ -0.77
LSAMP-201ENST00000333617 IFNL3Q8IZI9 196 aa10.22□□□□□ -0.77
LSAMP-201ENST00000333617 CCDC24Q8N4L8 307 aa10.22□□□□□ -0.77
LSAMP-201ENST00000333617 PANK2Q9BZ23 570 aa10.22□□□□□ -0.77
LSAMP-201ENST00000333617 SLC6A16Q9GZN6 736 aa10.22□□□□□ -0.77
LSAMP-201ENST00000333617 NAPBQ9H115 298 aa10.22□□□□□ -0.77
LSAMP-201ENST00000333617 ARMT1Q9H993 441 aa10.22□□□□□ -0.77
LSAMP-201ENST00000333617 LRRC4BQ9NT99 713 aa10.22□□□□□ -0.77
LSAMP-201ENST00000333617 DENND2AQ9ULE3 1009 aa10.22□□□□□ -0.77
LSAMP-201ENST00000333617 IQSEC3Q9UPP2 1182 aaPredicted RBP10.22□□□□□ -0.77
LSAMP-201ENST00000333617 COL1A1P02452 1464 aaPredicted RBP10.22□□□□□ -0.77
LSAMP-201ENST00000333617 PTPDC1A2A3K4 754 aa10.22□□□□□ -0.77
LSAMP-201ENST00000333617 CTDNEP1O95476 244 aa10.22□□□□□ -0.77
LSAMP-201ENST00000333617 ANTXR2P58335 489 aa10.22□□□□□ -0.77
LSAMP-201ENST00000333617 SLC27A3Q5K4L6 730 aa10.22□□□□□ -0.77
LSAMP-201ENST00000333617 LRSAM1Q6UWE0 723 aa10.22□□□□□ -0.77
LSAMP-201ENST00000333617 TBC1D10CQ8IV04 446 aa10.22□□□□□ -0.77
LSAMP-201ENST00000333617 FAM84BQ96KN1 310 aaPredicted RBP10.22□□□□□ -0.77
LSAMP-201ENST00000333617 SPSB2Q99619 263 aa10.22□□□□□ -0.77
LSAMP-201ENST00000333617 NACAP1Q9BZK3 213 aa10.22□□□□□ -0.77
LSAMP-201ENST00000333617 NCOA5Q9HCD5 579 aaKnown RBP10.22□□□□□ -0.77
LSAMP-201ENST00000333617 RAI14Q9P0K7 980 aa10.22□□□□□ -0.77
LSAMP-201ENST00000333617 ABCF2Q9UG63 623 aa10.22□□□□□ -0.77
LSAMP-201ENST00000333617 KLF18A0A0U1RQI7 1052 aa10.21□□□□□ -0.78
LSAMP-201ENST00000333617 SYCE3A1L190 88 aa10.21□□□□□ -0.78
LSAMP-201ENST00000333617 WTIPA6NIX2 430 aaPredicted RBP10.21□□□□□ -0.78
LSAMP-201ENST00000333617 GOLGA8BA8MQT2 603 aa10.21□□□□□ -0.78
LSAMP-201ENST00000333617 GSG1L2A8MUP6 293 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms