RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 SHC4Q6S5L8 630 aa12.4□□□□□ -0.42
CCDC172-201ENST00000333254 NBPF11Q86T75 865 aa12.4□□□□□ -0.42
CCDC172-201ENST00000333254 MARCH10Q8NA82 808 aaPredicted RBP12.4□□□□□ -0.42
CCDC172-201ENST00000333254 BRIP1Q9BX63 1249 aa12.4□□□□□ -0.42
CCDC172-201ENST00000333254 RNF26Q9BY78 433 aaPredicted RBP12.4□□□□□ -0.42
CCDC172-201ENST00000333254 SENP2Q9HC62 589 aa12.4□□□□□ -0.42
CCDC172-201ENST00000333254 GJB4Q9NTQ9 266 aa12.4□□□□□ -0.42
CCDC172-201ENST00000333254 TACC3Q9Y6A5 838 aa12.4□□□□□ -0.42
CCDC172-201ENST00000333254 SLC4A4Q9Y6R1 1079 aa12.4□□□□□ -0.42
CCDC172-201ENST00000333254 NHSQ6T4R5 1651 aa12.39□□□□□ -0.43
CCDC172-201ENST00000333254 PPFIA3O75145 1194 aa12.39□□□□□ -0.43
CCDC172-201ENST00000333254 CTDSPL2Q05D32 466 aa12.39□□□□□ -0.43
CCDC172-201ENST00000333254 PPARAQ07869 468 aa12.39□□□□□ -0.43
CCDC172-201ENST00000333254 RAB11FIP4Q86YS3 637 aa12.39□□□□□ -0.43
CCDC172-201ENST00000333254 PHKBQ93100 1093 aa12.39□□□□□ -0.43
CCDC172-201ENST00000333254 AIFM3Q96NN9 605 aa12.39□□□□□ -0.43
CCDC172-201ENST00000333254 BSDC1Q9NW68 430 aaPredicted RBP12.39□□□□□ -0.43
CCDC172-201ENST00000333254 FAM13BQ9NYF5 915 aa12.39□□□□□ -0.43
CCDC172-201ENST00000333254 HOOK1Q9UJC3 728 aaKnown RBP12.39□□□□□ -0.43
CCDC172-201ENST00000333254 TAF1P21675 1872 aa12.39□□□□□ -0.43
CCDC172-201ENST00000333254 COL1A1P02452 1464 aaPredicted RBP12.39□□□□□ -0.43
CCDC172-201ENST00000333254 TAF1LQ8IZX4 1826 aa12.39□□□□□ -0.43
CCDC172-201ENST00000333254 PTPREP23469 700 aa12.38□□□□□ -0.43
CCDC172-201ENST00000333254 BCAMP50895 628 aa12.38□□□□□ -0.43
CCDC172-201ENST00000333254 SEC23AQ15436 765 aa12.38□□□□□ -0.43
CCDC172-201ENST00000333254 NYAP1Q6ZVC0 841 aa12.38□□□□□ -0.43
CCDC172-201ENST00000333254 CRACR2BQ8N4Y2 399 aaPredicted RBP12.38□□□□□ -0.43
CCDC172-201ENST00000333254 KRI1Q8N9T8 703 aaKnown RBP12.38□□□□□ -0.43
CCDC172-201ENST00000333254 ESR2Q92731 530 aa12.38□□□□□ -0.43
CCDC172-201ENST00000333254 SLC26A6Q9BXS9 759 aa12.38□□□□□ -0.43
CCDC172-201ENST00000333254 LRP2BPQ9P2M1 347 aa12.38□□□□□ -0.43
CCDC172-201ENST00000333254 CEP131Q9UPN4 1083 aa12.38□□□□□ -0.43
CCDC172-201ENST00000333254 LY75O60449 1722 aa12.38□□□□□ -0.43
CCDC172-201ENST00000333254 RIOK3O14730 519 aaKnown RBP12.38□□□□□ -0.43
CCDC172-201ENST00000333254 CBFA2T2O43439 604 aa12.38□□□□□ -0.43
CCDC172-201ENST00000333254 CT47A1Q5JQC4 288 aaPredicted RBP12.38□□□□□ -0.43
CCDC172-201ENST00000333254 NT5DC1Q5TFE4 455 aa12.38□□□□□ -0.43
CCDC172-201ENST00000333254 KRBA2Q6ZNG9 492 aa12.38□□□□□ -0.43
CCDC172-201ENST00000333254 ANKRD18AQ8IVF6 992 aa12.38□□□□□ -0.43
CCDC172-201ENST00000333254 ZNF654Q8IZM8 581 aa12.38□□□□□ -0.43
CCDC172-201ENST00000333254 TRIML1Q8N9V2 468 aa12.38□□□□□ -0.43
CCDC172-201ENST00000333254 ANKRD7Q92527 254 aa12.38□□□□□ -0.43
CCDC172-201ENST00000333254 RIOK1Q9BRS2 568 aaKnown RBP12.38□□□□□ -0.43
CCDC172-201ENST00000333254 BTAF1O14981 1849 aa12.37□□□□□ -0.43
CCDC172-201ENST00000333254 SBF2Q86WG5 1849 aa12.37□□□□□ -0.43
CCDC172-201ENST00000333254 MAGEB6P1A0A0J9YX57 407 aa12.37□□□□□ -0.43
CCDC172-201ENST00000333254 PSDA5PKW4 1024 aaPredicted RBP12.37□□□□□ -0.43
CCDC172-201ENST00000333254 NRDCO43847 1150 aa12.37□□□□□ -0.43
CCDC172-201ENST00000333254 BMP15O95972 392 aa12.37□□□□□ -0.43
CCDC172-201ENST00000333254 CALM1P0DP23 149 aa12.37□□□□□ -0.43
CCDC172-201ENST00000333254 CALM2P0DP24 149 aa12.37□□□□□ -0.43
CCDC172-201ENST00000333254 CALM3P0DP25 149 aa12.37□□□□□ -0.43
CCDC172-201ENST00000333254 SKILP12757 684 aa12.37□□□□□ -0.43
CCDC172-201ENST00000333254 TNNT1P13805 278 aa12.37□□□□□ -0.43
CCDC172-201ENST00000333254 RXRAP19793 462 aa12.37□□□□□ -0.43
CCDC172-201ENST00000333254 CYP7A1P22680 504 aa12.37□□□□□ -0.43
CCDC172-201ENST00000333254 MYL5Q02045 173 aa12.37□□□□□ -0.43
CCDC172-201ENST00000333254 KANK3Q6NY19 840 aa12.37□□□□□ -0.43
CCDC172-201ENST00000333254 DIS3L2Q8IYB7 885 aaKnown RBP12.37□□□□□ -0.43
CCDC172-201ENST00000333254 FANCBQ8NB91 859 aa12.37□□□□□ -0.43
CCDC172-201ENST00000333254 RBM28Q9NW13 759 aaKnown RBP12.37□□□□□ -0.43
CCDC172-201ENST00000333254 PRKAB2O43741 272 aa12.36□□□□□ -0.43
CCDC172-201ENST00000333254 MARCKSP29966 332 aaPredicted RBP12.36□□□□□ -0.43
CCDC172-201ENST00000333254 RBM10P98175 930 aaKnown RBP12.36□□□□□ -0.43
CCDC172-201ENST00000333254 RC3H1Q5TC82 1133 aaKnown RBP12.36□□□□□ -0.43
CCDC172-201ENST00000333254 ZNF710Q8N1W2 664 aa12.36□□□□□ -0.43
CCDC172-201ENST00000333254 UBAC1Q9BSL1 405 aa12.36□□□□□ -0.43
CCDC172-201ENST00000333254 BCL2L12Q9HB09 334 aa12.36□□□□□ -0.43
CCDC172-201ENST00000333254 FBXO2Q9UK22 296 aaPredicted RBP12.36□□□□□ -0.43
CCDC172-201ENST00000333254 KCNH3Q9ULD8 1083 aa12.36□□□□□ -0.43
CCDC172-201ENST00000333254 ORC4O43929 436 aa12.35□□□□□ -0.43
CCDC172-201ENST00000333254 DDAH1O94760 285 aa12.35□□□□□ -0.43
CCDC172-201ENST00000333254 XBP1P17861 261 aa12.35□□□□□ -0.43
CCDC172-201ENST00000333254 TOB1P50616 345 aaPredicted RBP12.35□□□□□ -0.43
CCDC172-201ENST00000333254 TPD52L1Q16890 204 aaPredicted RBP12.35□□□□□ -0.43
CCDC172-201ENST00000333254 CAVIN4Q5BKX8 364 aa12.35□□□□□ -0.43
CCDC172-201ENST00000333254 FBXO33Q7Z6M2 555 aa12.35□□□□□ -0.43
CCDC172-201ENST00000333254 METTL16Q86W50 562 aaKnown RBP12.35□□□□□ -0.43
CCDC172-201ENST00000333254 CCAR2Q8N163 923 aaKnown RBP12.35□□□□□ -0.43
CCDC172-201ENST00000333254 STK11IPQ8N1F8 1099 aa12.35□□□□□ -0.43
CCDC172-201ENST00000333254 CCDC112Q8NEF3 446 aa12.35□□□□□ -0.43
CCDC172-201ENST00000333254 XPO4Q9C0E2 1151 aaKnown RBP12.35□□□□□ -0.43
CCDC172-201ENST00000333254 NYXQ9GZU5 481 aa12.35□□□□□ -0.43
CCDC172-201ENST00000333254 SRPRBQ9Y5M8 271 aaKnown RBP12.35□□□□□ -0.43
CCDC172-201ENST00000333254 THSD7AQ9UPZ6 1657 aa12.35□□□□□ -0.43
CCDC172-201ENST00000333254 CCP110O43303 1012 aa12.35□□□□□ -0.43
CCDC172-201ENST00000333254 PRPF3O43395 683 aaKnown RBP12.35□□□□□ -0.43
CCDC172-201ENST00000333254 MDM2Q00987 491 aaPredicted RBP12.35□□□□□ -0.43
CCDC172-201ENST00000333254 FUT2Q10981 343 aa12.35□□□□□ -0.43
CCDC172-201ENST00000333254 OLFM4Q6UX06 510 aa12.35□□□□□ -0.43
CCDC172-201ENST00000333254 CCDC34Q96HJ3 373 aa12.35□□□□□ -0.43
CCDC172-201ENST00000333254 C16orf45Q96MC5 204 aaPredicted RBP12.35□□□□□ -0.43
CCDC172-201ENST00000333254 MYL10Q9BUA6 226 aa12.35□□□□□ -0.43
CCDC172-201ENST00000333254 CCDC94Q9BW85 323 aaPredicted RBP12.35□□□□□ -0.43
CCDC172-201ENST00000333254 HSD3B7Q9H2F3 369 aa12.35□□□□□ -0.43
CCDC172-201ENST00000333254 IFNKQ9P0W0 207 aa12.35□□□□□ -0.43
CCDC172-201ENST00000333254 DACH1Q9UI36 760 aa12.35□□□□□ -0.43
CCDC172-201ENST00000333254 TNKSO95271 1327 aa12.34□□□□□ -0.43
CCDC172-201ENST00000333254 BTBD18B2RXH4 712 aa12.34□□□□□ -0.43
CCDC172-201ENST00000333254 SNAP23O00161 211 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms