RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 SPDYE6P0CI01 402 aa27.4■■□□□ 1.98
TSEN54-201ENST00000333213 PCP11498 1178 aaKnown RBP27.4■■□□□ 1.98
TSEN54-201ENST00000333213 TNIP1Q15025 636 aa27.4■■□□□ 1.98
TSEN54-201ENST00000333213 CCDC83Q8IWF9 413 aa27.4■■□□□ 1.98
TSEN54-201ENST00000333213 OGFOD1Q8N543 542 aa27.4■■□□□ 1.98
TSEN54-201ENST00000333213 SLC44A5Q8NCS7 719 aa27.4■■□□□ 1.98
TSEN54-201ENST00000333213 ZKSCAN3Q9BRR0 538 aa27.4■■□□□ 1.98
TSEN54-201ENST00000333213 FAM198AQ9UFP1 575 aa27.4■■□□□ 1.98
TSEN54-201ENST00000333213 BRPF3Q9ULD4 1205 aa27.4■■□□□ 1.98
TSEN54-201ENST00000333213 ZNF541Q9H0D2 1346 aa27.4■■□□□ 1.98
TSEN54-201ENST00000333213 SH2B2O14492 632 aaPredicted RBP27.39■■□□□ 1.98
TSEN54-201ENST00000333213 ORC4O43929 436 aa27.39■■□□□ 1.98
TSEN54-201ENST00000333213 STK3Q13188 491 aa27.39■■□□□ 1.98
TSEN54-201ENST00000333213 IDI2Q9BXS1 227 aa27.39■■□□□ 1.98
TSEN54-201ENST00000333213 OSBPL5Q9H0X9 879 aaPredicted RBP27.39■■□□□ 1.98
TSEN54-201ENST00000333213 SBF1O95248 1867 aa27.39■■□□□ 1.97
TSEN54-201ENST00000333213 LMNB1P20700 586 aa27.39■■□□□ 1.97
TSEN54-201ENST00000333213 ESR2Q92731 530 aa27.39■■□□□ 1.97
TSEN54-201ENST00000333213 HDAC9Q9UKV0 1011 aa27.39■■□□□ 1.97
TSEN54-201ENST00000333213 TMEM87BQ96K49 555 aa27.38■■□□□ 1.97
TSEN54-201ENST00000333213 ANGEL1Q9UNK9 670 aaKnown RBP27.38■■□□□ 1.97
TSEN54-201ENST00000333213 AMOTL1Q8IY63 956 aa27.37■■□□□ 1.97
TSEN54-201ENST00000333213 LY9Q9HBG7 655 aa27.37■■□□□ 1.97
TSEN54-201ENST00000333213 RANBP6O60518 1105 aaKnown RBP27.37■■□□□ 1.97
TSEN54-201ENST00000333213 SLC3A2P08195 630 aaKnown RBP27.37■■□□□ 1.97
TSEN54-201ENST00000333213 PDIA3P30101 505 aaKnown RBP27.37■■□□□ 1.97
TSEN54-201ENST00000333213 EIF6P56537 245 aaKnown RBP27.37■■□□□ 1.97
TSEN54-201ENST00000333213 PDE4BQ07343 736 aa27.37■■□□□ 1.97
TSEN54-201ENST00000333213 TCP10Q12799 353 aa27.36■■□□□ 1.97
TSEN54-201ENST00000333213 DLGAP5Q15398 846 aa27.36■■□□□ 1.97
TSEN54-201ENST00000333213 DICER1Q9UPY3 1922 aaKnown RBP27.36■■□□□ 1.97
TSEN54-201ENST00000333213 EGFRP00533 1210 aa27.35■■□□□ 1.97
TSEN54-201ENST00000333213 SCRN1Q12765 414 aa27.35■■□□□ 1.97
TSEN54-201ENST00000333213 FAM47AQ5JRC9 791 aa27.35■■□□□ 1.97
TSEN54-201ENST00000333213 MTMR14Q8NCE2 650 aa27.35■■□□□ 1.97
TSEN54-201ENST00000333213 GTF3C6Q969F1 213 aa27.35■■□□□ 1.97
TSEN54-201ENST00000333213 ZNF274Q96GC6 653 aaPredicted RBP27.35■■□□□ 1.97
TSEN54-201ENST00000333213 ZBED3Q96IU2 234 aaPredicted RBP27.35■■□□□ 1.97
TSEN54-201ENST00000333213 GJA3Q9Y6H8 435 aa27.35■■□□□ 1.97
TSEN54-201ENST00000333213 IFIT3O14879 490 aaKnown RBP27.35■■□□□ 1.97
TSEN54-201ENST00000333213 GMPSP49915 693 aaPredicted RBP27.35■■□□□ 1.97
TSEN54-201ENST00000333213 TMEM67Q5HYA8 995 aa27.35■■□□□ 1.97
TSEN54-201ENST00000333213 C16orf86Q6ZW13 317 aa27.35■■□□□ 1.97
TSEN54-201ENST00000333213 PFKFB2O60825 505 aa27.34■■□□□ 1.97
TSEN54-201ENST00000333213 SLURP2P0DP57 97 aa27.34■■□□□ 1.97
TSEN54-201ENST00000333213 GABPAQ06546 454 aa27.34■■□□□ 1.97
TSEN54-201ENST00000333213 SEC23AQ15436 765 aa27.34■■□□□ 1.97
TSEN54-201ENST00000333213 SH3BP5LQ7L8J4 393 aa27.34■■□□□ 1.97
TSEN54-201ENST00000333213 HPS5Q9UPZ3 1129 aa27.34■■□□□ 1.97
TSEN54-201ENST00000333213 KLF18A0A0U1RQI7 1052 aa27.33■■□□□ 1.97
TSEN54-201ENST00000333213 NPM3O75607 178 aaKnown RBP27.33■■□□□ 1.97
TSEN54-201ENST00000333213 RPS12P25398 132 aaKnown RBP27.33■■□□□ 1.97
TSEN54-201ENST00000333213 LIFRP42702 1097 aa27.33■■□□□ 1.97
TSEN54-201ENST00000333213 CDK8P49336 464 aa27.33■■□□□ 1.97
TSEN54-201ENST00000333213 ZNF280AP59817 542 aaPredicted RBP27.33■■□□□ 1.97
TSEN54-201ENST00000333213 SGMS1Q86VZ5 419 aa27.33■■□□□ 1.97
TSEN54-201ENST00000333213 MYOZ2Q9NPC6 264 aa27.33■■□□□ 1.97
TSEN54-201ENST00000333213 CLRN2A0PK11 232 aa27.33■■□□□ 1.97
TSEN54-201ENST00000333213 DDTLA6NHG4 134 aaPredicted RBP27.33■■□□□ 1.97
TSEN54-201ENST00000333213 MTA3Q9BTC8 594 aa27.33■■□□□ 1.97
TSEN54-201ENST00000333213 CWC22Q9HCG8 908 aaKnown RBP27.33■■□□□ 1.97
TSEN54-201ENST00000333213 TNKSO95271 1327 aa27.32■■□□□ 1.96
TSEN54-201ENST00000333213 WNT10BO00744 389 aa27.32■■□□□ 1.96
TSEN54-201ENST00000333213 NMT2O60551 498 aa27.32■■□□□ 1.96
TSEN54-201ENST00000333213 RASA1P20936 1047 aa27.32■■□□□ 1.96
TSEN54-201ENST00000333213 CCT2P78371 535 aaKnown RBP27.32■■□□□ 1.96
TSEN54-201ENST00000333213 PKP1Q13835 747 aa27.32■■□□□ 1.96
TSEN54-201ENST00000333213 NBPF9Q3BBW0 867 aa27.32■■□□□ 1.96
TSEN54-201ENST00000333213 TTC6Q86TZ1 520 aa27.32■■□□□ 1.96
TSEN54-201ENST00000333213 RAB11FIP4Q86YS3 637 aa27.32■■□□□ 1.96
TSEN54-201ENST00000333213 NCOA5Q9HCD5 579 aaKnown RBP27.32■■□□□ 1.96
TSEN54-201ENST00000333213 CHMP5Q9NZZ3 219 aa27.32■■□□□ 1.96
TSEN54-201ENST00000333213 ZNF70Q9UC06 446 aaPredicted RBP27.32■■□□□ 1.96
TSEN54-201ENST00000333213 ENAHQ8N8S7 591 aaPredicted RBP27.31■■□□□ 1.96
TSEN54-201ENST00000333213 DPF2Q92785 391 aa27.31■■□□□ 1.96
TSEN54-201ENST00000333213 ZSCAN10Q96SZ4 725 aaPredicted RBP27.31■■□□□ 1.96
TSEN54-201ENST00000333213 MKNK2Q9HBH9 465 aa27.31■■□□□ 1.96
TSEN54-201ENST00000333213 SPDYE2Q495Y8 402 aa27.31■■□□□ 1.96
TSEN54-201ENST00000333213 NAP1L2Q9ULW6 460 aaPredicted RBP27.31■■□□□ 1.96
TSEN54-201ENST00000333213 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.31■■□□□ 1.96
TSEN54-201ENST00000333213 SIPA1L1O43166 1804 aa27.31■■□□□ 1.96
TSEN54-201ENST00000333213 TFAP4Q01664 338 aa27.3■■□□□ 1.96
TSEN54-201ENST00000333213 APOA5Q6Q788 366 aa27.3■■□□□ 1.96
TSEN54-201ENST00000333213 MICALL2Q8IY33 904 aa27.3■■□□□ 1.96
TSEN54-201ENST00000333213 UBAC1Q9BSL1 405 aa27.3■■□□□ 1.96
TSEN54-201ENST00000333213 TSPY2A6NKD2 308 aa27.29■■□□□ 1.96
TSEN54-201ENST00000333213 WTAPQ15007 396 aa27.29■■□□□ 1.96
TSEN54-201ENST00000333213 IL17RBQ9NRM6 502 aa27.29■■□□□ 1.96
TSEN54-201ENST00000333213 CNOT7Q9UIV1 285 aaKnown RBP27.29■■□□□ 1.96
TSEN54-201ENST00000333213 CIZ1Q9ULV3 898 aaPredicted RBP27.29■■□□□ 1.96
TSEN54-201ENST00000333213 CTDNEP1O95476 244 aa27.29■■□□□ 1.96
TSEN54-201ENST00000333213 SART3Q15020 963 aaKnown RBP27.29■■□□□ 1.96
TSEN54-201ENST00000333213 SERPINB13Q9UIV8 391 aa27.29■■□□□ 1.96
TSEN54-201ENST00000333213 GOLGA8BA8MQT2 603 aa27.28■■□□□ 1.96
TSEN54-201ENST00000333213 TCP10L2B9ZVM9 353 aa27.28■■□□□ 1.96
TSEN54-201ENST00000333213 ENTPD3O75355 529 aa27.28■■□□□ 1.96
TSEN54-201ENST00000333213 RXRAP19793 462 aa27.28■■□□□ 1.96
TSEN54-201ENST00000333213 SAMD7Q7Z3H4 446 aa27.28■■□□□ 1.96
TSEN54-201ENST00000333213 IQCA1Q86XH1 822 aa27.28■■□□□ 1.96
TSEN54-201ENST00000333213 MYL10Q9BUA6 226 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms