RNA–Protein interactions for RNA: ENST00000331758.7

SS18L1-201, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L1, Length 4,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-201ENST00000331758 OVOS2A0A0G2JMS6 1433 aa10.85□□□□□ -0.67
SS18L1-201ENST00000331758 POLR2DO15514 142 aaKnown RBP10.85□□□□□ -0.67
SS18L1-201ENST00000331758 TNNT1P13805 278 aa10.85□□□□□ -0.67
SS18L1-201ENST00000331758 ITPK1Q13572 414 aa10.85□□□□□ -0.67
SS18L1-201ENST00000331758 ARHGAP29Q52LW3 1261 aa10.85□□□□□ -0.67
SS18L1-201ENST00000331758 CAGE1Q8TC20 777 aa10.85□□□□□ -0.67
SS18L1-201ENST00000331758 MED23Q9ULK4 1368 aa10.85□□□□□ -0.67
SS18L1-201ENST00000331758 AMPD3Q01432 767 aa10.85□□□□□ -0.67
SS18L1-201ENST00000331758 DTHD1Q6ZMT9 781 aa10.85□□□□□ -0.67
SS18L1-201ENST00000331758 PYM1Q9BRP8 204 aaKnown RBP10.85□□□□□ -0.67
SS18L1-201ENST00000331758 LEMD3Q9Y2U8 911 aa10.85□□□□□ -0.67
SS18L1-201ENST00000331758 UTYO14607 1347 aa10.85□□□□□ -0.67
SS18L1-201ENST00000331758 N4BP3O15049 544 aa10.84□□□□□ -0.67
SS18L1-201ENST00000331758 BTDP43251 543 aa10.84□□□□□ -0.67
SS18L1-201ENST00000331758 GSDMDP57764 484 aa10.84□□□□□ -0.67
SS18L1-201ENST00000331758 USP40Q9NVE5 1235 aa10.84□□□□□ -0.67
SS18L1-201ENST00000331758 PTGS1P23219 599 aa10.84□□□□□ -0.67
SS18L1-201ENST00000331758 MTIF2P46199 727 aaKnown RBP10.84□□□□□ -0.67
SS18L1-201ENST00000331758 ZNF771Q7L3S4 317 aaPredicted RBP10.84□□□□□ -0.67
SS18L1-201ENST00000331758 LARGE2Q8N3Y3 721 aa10.84□□□□□ -0.67
SS18L1-201ENST00000331758 GJD4Q96KN9 370 aaPredicted RBP10.84□□□□□ -0.67
SS18L1-201ENST00000331758 TRIM47Q96LD4 638 aa10.84□□□□□ -0.67
SS18L1-201ENST00000331758 USP42Q9H9J4 1324 aaKnown RBP10.84□□□□□ -0.67
SS18L1-201ENST00000331758 YEATS4O95619 227 aa10.84□□□□□ -0.67
SS18L1-201ENST00000331758 PDE6BP35913 854 aa10.84□□□□□ -0.67
SS18L1-201ENST00000331758 PPP2R5BQ15173 497 aa10.84□□□□□ -0.67
SS18L1-201ENST00000331758 GOLGA6L1Q8N7Z2 621 aa10.84□□□□□ -0.67
SS18L1-201ENST00000331758 PNMA1Q8ND90 353 aa10.84□□□□□ -0.67
SS18L1-201ENST00000331758 AIFM3Q96NN9 605 aa10.84□□□□□ -0.67
SS18L1-201ENST00000331758 NUP88Q99567 741 aaPredicted RBP10.84□□□□□ -0.67
SS18L1-201ENST00000331758 CBX8Q9HC52 389 aa10.84□□□□□ -0.67
SS18L1-201ENST00000331758 ARGLU1Q9NWB6 273 aaPredicted RBP10.84□□□□□ -0.67
SS18L1-201ENST00000331758 IFNKQ9P0W0 207 aa10.84□□□□□ -0.67
SS18L1-201ENST00000331758 ZHX1Q9UKY1 873 aaPredicted RBP10.84□□□□□ -0.67
SS18L1-201ENST00000331758 NCOA3Q9Y6Q9 1424 aa10.84□□□□□ -0.67
SS18L1-201ENST00000331758 SKILP12757 684 aa10.84□□□□□ -0.67
SS18L1-201ENST00000331758 PRDX5P30044 214 aa10.84□□□□□ -0.67
SS18L1-201ENST00000331758 JAKMIP3Q5VZ66 844 aa10.84□□□□□ -0.67
SS18L1-201ENST00000331758 GJB4Q9NTQ9 266 aa10.84□□□□□ -0.67
SS18L1-201ENST00000331758 ASIC1P78348 528 aa10.83□□□□□ -0.68
SS18L1-201ENST00000331758 TTC38Q5R3I4 469 aa10.83□□□□□ -0.68
SS18L1-201ENST00000331758 IQUBQ8NA54 791 aa10.83□□□□□ -0.68
SS18L1-201ENST00000331758 DYNC1I1O14576 645 aa10.83□□□□□ -0.68
SS18L1-201ENST00000331758 ENOX2Q16206 610 aaKnown RBP10.83□□□□□ -0.68
SS18L1-201ENST00000331758 C2CD5Q86YS7 1000 aa10.83□□□□□ -0.68
SS18L1-201ENST00000331758 ZNF34Q8IZ26 560 aa10.83□□□□□ -0.68
SS18L1-201ENST00000331758 STAMQ92783 540 aa10.83□□□□□ -0.68
SS18L1-201ENST00000331758 TMX1Q9H3N1 280 aa10.83□□□□□ -0.68
SS18L1-201ENST00000331758 ATP8A2Q9NTI2 1148 aa10.83□□□□□ -0.68
SS18L1-201ENST00000331758 ZDHHC9Q9Y397 364 aa10.83□□□□□ -0.68
SS18L1-201ENST00000331758 SEMA3EO15041 775 aa10.83□□□□□ -0.68
SS18L1-201ENST00000331758 NEMFO60524 1076 aa10.83□□□□□ -0.68
SS18L1-201ENST00000331758 CSF1RP07333 972 aa10.83□□□□□ -0.68
SS18L1-201ENST00000331758 GOLGA8HP0CJ92 632 aa10.83□□□□□ -0.68
SS18L1-201ENST00000331758 MECOMQ03112 1051 aa10.83□□□□□ -0.68
SS18L1-201ENST00000331758 NOLC1Q14978 699 aaKnown RBP eCLIP10.83□□□□□ -0.68
SS18L1-201ENST00000331758 TMEM132AQ24JP5 1023 aa10.83□□□□□ -0.68
SS18L1-201ENST00000331758 WDR78Q5VTH9 848 aa10.83□□□□□ -0.68
SS18L1-201ENST00000331758 TAF6LQ9Y6J9 622 aa10.83□□□□□ -0.68
SS18L1-201ENST00000331758 CARMIL3Q8ND23 1372 aa10.83□□□□□ -0.68
SS18L1-201ENST00000331758 PPIP5K2O43314 1243 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 CUTAO60888 179 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 PPP4R3BQ5MIZ7 849 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 FKBP15Q5T1M5 1219 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 ADALQ6DHV7 355 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 NOSTRINQ8IVI9 506 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 EXOC1Q9NV70 894 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 PCDHA7Q9UN72 937 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 CLIC4Q9Y696 253 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 CAMTA2O94983 1202 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 POLD1P28340 1107 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 ARID4AP29374 1257 aaPredicted RBP10.82□□□□□ -0.68
SS18L1-201ENST00000331758 GRAPQ13588 217 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 TTLL12Q14166 644 aaPredicted RBP10.82□□□□□ -0.68
SS18L1-201ENST00000331758 TNIP1Q15025 636 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 KIF18AQ8NI77 898 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 SMARCC2Q8TAQ2 1214 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 GRAPLQ8TC17 118 aaPredicted RBP10.82□□□□□ -0.68
SS18L1-201ENST00000331758 TEKT1Q969V4 418 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 TSG101Q99816 390 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.82□□□□□ -0.68
SS18L1-201ENST00000331758 JCADQ9P266 1359 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 BBOX1O75936 387 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 USP17L8P0C7I0 530 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 ZYXQ15942 572 aaKnown RBP10.82□□□□□ -0.68
SS18L1-201ENST00000331758 CT47A1Q5JQC4 288 aaPredicted RBP10.82□□□□□ -0.68
SS18L1-201ENST00000331758 CERS3Q8IU89 383 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 TBC1D10CQ8IV04 446 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 PLA2G12BQ9BX93 195 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 URI1O94763 535 aaPredicted RBP10.82□□□□□ -0.68
SS18L1-201ENST00000331758 CBX1P83916 185 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 STOX1Q6ZVD7 989 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 KIAA1328Q86T90 577 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 FLAD1Q8NFF5 587 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 UIMC1Q96RL1 719 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 RMND1Q9NWS8 449 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 SAMM50Q9Y512 469 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 SH2B2O14492 632 aaPredicted RBP10.81□□□□□ -0.68
SS18L1-201ENST00000331758 VPS72Q15906 364 aa10.81□□□□□ -0.68
SS18L1-201ENST00000331758 CLIC6Q96NY7 704 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms