RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 PPP2R5AQ15172 486 aa11.79□□□□□ -0.52
CLN8-201ENST00000331222 BRDTQ58F21 947 aaPredicted RBP11.79□□□□□ -0.52
CLN8-201ENST00000331222 UTP11Q9Y3A2 253 aaKnown RBP11.79□□□□□ -0.52
CLN8-201ENST00000331222 TROQ12816 1431 aaPredicted RBP11.79□□□□□ -0.52
CLN8-201ENST00000331222 TESPA1A2RU30 521 aaPredicted RBP11.79□□□□□ -0.52
CLN8-201ENST00000331222 PRIM1P49642 420 aaKnown RBP11.79□□□□□ -0.52
CLN8-201ENST00000331222 TRAF1Q13077 416 aa11.79□□□□□ -0.52
CLN8-201ENST00000331222 KSR2Q6VAB6 950 aa11.79□□□□□ -0.52
CLN8-201ENST00000331222 AZI2Q9H6S1 392 aa11.79□□□□□ -0.52
CLN8-201ENST00000331222 SUDS3Q9H7L9 328 aaPredicted RBP11.79□□□□□ -0.52
CLN8-201ENST00000331222 GGA1Q9UJY5 639 aa11.79□□□□□ -0.52
CLN8-201ENST00000331222 TCP10L2B9ZVM9 353 aa11.79□□□□□ -0.52
CLN8-201ENST00000331222 F13A1P00488 732 aa11.79□□□□□ -0.52
CLN8-201ENST00000331222 MTHFSDQ2M296 383 aaKnown RBP11.79□□□□□ -0.52
CLN8-201ENST00000331222 MAPKAPK5Q8IW41 473 aa11.79□□□□□ -0.52
CLN8-201ENST00000331222 ZBTB24O43167 697 aaPredicted RBP11.79□□□□□ -0.52
CLN8-201ENST00000331222 CIB2O75838 187 aa11.79□□□□□ -0.52
CLN8-201ENST00000331222 IRX3P78415 501 aaPredicted RBP11.79□□□□□ -0.52
CLN8-201ENST00000331222 TCIRG1Q13488 830 aa11.79□□□□□ -0.52
CLN8-201ENST00000331222 NOLC1Q14978 699 aaKnown RBP eCLIP11.79□□□□□ -0.52
CLN8-201ENST00000331222 CLUL1Q15846 466 aa11.79□□□□□ -0.52
CLN8-201ENST00000331222 DOK7Q18PE1 504 aa11.79□□□□□ -0.52
CLN8-201ENST00000331222 TMTC4Q5T4D3 741 aa11.79□□□□□ -0.52
CLN8-201ENST00000331222 NSMCE1Q8WV22 266 aa11.79□□□□□ -0.52
CLN8-201ENST00000331222 DACT3Q96B18 629 aaPredicted RBP11.79□□□□□ -0.52
CLN8-201ENST00000331222 DISP3Q9P2K9 1392 aa11.78□□□□□ -0.52
CLN8-201ENST00000331222 PCF11O94913 1555 aaKnown RBP11.78□□□□□ -0.52
CLN8-201ENST00000331222 FAM102BQ5T8I3 360 aa11.78□□□□□ -0.52
CLN8-201ENST00000331222 NXNQ6DKJ4 435 aa11.78□□□□□ -0.52
CLN8-201ENST00000331222 CACYBPQ9HB71 228 aaKnown RBP11.78□□□□□ -0.52
CLN8-201ENST00000331222 SAMD15Q9P1V8 674 aa11.78□□□□□ -0.52
CLN8-201ENST00000331222 TNNI1P19237 187 aa11.78□□□□□ -0.52
CLN8-201ENST00000331222 AKAP4Q5JQC9 854 aa11.78□□□□□ -0.52
CLN8-201ENST00000331222 CARD10Q9BWT7 1032 aa11.78□□□□□ -0.52
CLN8-201ENST00000331222 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.78□□□□□ -0.52
CLN8-201ENST00000331222 STK10O94804 968 aaKnown RBP11.78□□□□□ -0.52
CLN8-201ENST00000331222 GNAT2P19087 354 aa11.78□□□□□ -0.52
CLN8-201ENST00000331222 HIBADHP31937 336 aaKnown RBP11.78□□□□□ -0.52
CLN8-201ENST00000331222 BANK1Q8NDB2 785 aa11.78□□□□□ -0.52
CLN8-201ENST00000331222 CALUO43852 315 aaPredicted RBP11.78□□□□□ -0.52
CLN8-201ENST00000331222 OATP04181 439 aa11.78□□□□□ -0.52
CLN8-201ENST00000331222 ADAT2Q7Z6V5 191 aaKnown RBP11.78□□□□□ -0.52
CLN8-201ENST00000331222 CCDC125Q86Z20 511 aa11.78□□□□□ -0.52
CLN8-201ENST00000331222 KLHL7Q8IXQ5 586 aa11.78□□□□□ -0.52
CLN8-201ENST00000331222 BLZF1Q9H2G9 400 aa11.78□□□□□ -0.52
CLN8-201ENST00000331222 TRPC6Q9Y210 931 aa11.78□□□□□ -0.52
CLN8-201ENST00000331222 V9GY48 417 aaPredicted RBP11.78□□□□□ -0.52
CLN8-201ENST00000331222 RUFY3Q7L099 469 aa11.78□□□□□ -0.52
CLN8-201ENST00000331222 PPP1R12CQ9BZL4 782 aa11.78□□□□□ -0.52
CLN8-201ENST00000331222 LUC7L2Q9Y383 392 aaKnown RBP11.78□□□□□ -0.52
CLN8-201ENST00000331222 FEZ2Q9UHY8 353 aaPredicted RBP11.77□□□□□ -0.52
CLN8-201ENST00000331222 SETDB1Q15047 1291 aa11.77□□□□□ -0.52
CLN8-201ENST00000331222 ARHGEF16Q5VV41 709 aa11.77□□□□□ -0.52
CLN8-201ENST00000331222 GLG1Q92896 1179 aa11.77□□□□□ -0.52
CLN8-201ENST00000331222 ANKRD2Q9GZV1 360 aa11.77□□□□□ -0.52
CLN8-201ENST00000331222 AK9Q5TCS8 1911 aa11.77□□□□□ -0.52
CLN8-201ENST00000331222 ABCC11Q96J66 1382 aa11.77□□□□□ -0.53
CLN8-201ENST00000331222 EIF4A2Q14240 407 aaKnown RBP11.77□□□□□ -0.53
CLN8-201ENST00000331222 BMP15O95972 392 aa11.77□□□□□ -0.53
CLN8-201ENST00000331222 SCNN1DP51172 638 aa11.77□□□□□ -0.53
CLN8-201ENST00000331222 C10orf67Q8IYJ2 551 aa11.77□□□□□ -0.53
CLN8-201ENST00000331222 PPP1R16BQ96T49 567 aa11.77□□□□□ -0.53
CLN8-201ENST00000331222 HINFPQ9BQA5 517 aa11.77□□□□□ -0.53
CLN8-201ENST00000331222 TSGA10Q9BZW7 698 aa11.77□□□□□ -0.53
CLN8-201ENST00000331222 TSPOAP1O95153 1857 aa11.77□□□□□ -0.53
CLN8-201ENST00000331222 KAZNQ674X7 775 aa11.77□□□□□ -0.53
CLN8-201ENST00000331222 RILPQ96NA2 401 aa11.77□□□□□ -0.53
CLN8-201ENST00000331222 ASIC3Q9UHC3 531 aa11.77□□□□□ -0.53
CLN8-201ENST00000331222 ZBED4O75132 1171 aa11.77□□□□□ -0.53
CLN8-201ENST00000331222 CDAN1Q8IWY9 1227 aa11.77□□□□□ -0.53
CLN8-201ENST00000331222 CEP120Q8N960 986 aa11.77□□□□□ -0.53
CLN8-201ENST00000331222 TTC14Q96N46 770 aa11.77□□□□□ -0.53
CLN8-201ENST00000331222 NPHP3Q7Z494 1330 aa11.76□□□□□ -0.53
CLN8-201ENST00000331222 RPL13P26373 211 aaKnown RBP11.76□□□□□ -0.53
CLN8-201ENST00000331222 CALCRLQ16602 461 aa11.76□□□□□ -0.53
CLN8-201ENST00000331222 CCDC89Q8N998 374 aa11.76□□□□□ -0.53
CLN8-201ENST00000331222 PARD3BQ8TEW8 1205 aa11.76□□□□□ -0.53
CLN8-201ENST00000331222 RBM28Q9NW13 759 aaKnown RBP11.76□□□□□ -0.53
CLN8-201ENST00000331222 IL1RL1Q01638 556 aa11.76□□□□□ -0.53
CLN8-201ENST00000331222 TBC1D8BQ0IIM8 1120 aa11.76□□□□□ -0.53
CLN8-201ENST00000331222 OTUD7BQ6GQQ9 843 aa11.76□□□□□ -0.53
CLN8-201ENST00000331222 ZNF653Q96CK0 615 aa11.76□□□□□ -0.53
CLN8-201ENST00000331222 NKIRAS1Q9NYS0 192 aa11.76□□□□□ -0.53
CLN8-201ENST00000331222 A0A1B0GUL7 405 aa11.76□□□□□ -0.53
CLN8-201ENST00000331222 ALDH3A1P30838 453 aa11.76□□□□□ -0.53
CLN8-201ENST00000331222 YARSP54577 528 aaKnown RBP11.76□□□□□ -0.53
CLN8-201ENST00000331222 BMP2KLQ5H9B9 411 aa11.76□□□□□ -0.53
CLN8-201ENST00000331222 KRT222Q8N1A0 295 aa11.76□□□□□ -0.53
CLN8-201ENST00000331222 TSPYL6Q8N831 410 aa11.76□□□□□ -0.53
CLN8-201ENST00000331222 STIM2Q9P246 746 aa11.76□□□□□ -0.53
CLN8-201ENST00000331222 FNDC3AQ9Y2H6 1198 aaKnown RBP11.76□□□□□ -0.53
CLN8-201ENST00000331222 PPIP5K2O43314 1243 aa11.76□□□□□ -0.53
CLN8-201ENST00000331222 CASP2P42575 452 aa11.76□□□□□ -0.53
CLN8-201ENST00000331222 SLC1A4P43007 532 aa11.76□□□□□ -0.53
CLN8-201ENST00000331222 CYP2J2P51589 502 aa11.76□□□□□ -0.53
CLN8-201ENST00000331222 RYBPQ8N488 228 aaPredicted RBP11.76□□□□□ -0.53
CLN8-201ENST00000331222 PCDHB15Q9Y5E8 787 aa11.76□□□□□ -0.53
CLN8-201ENST00000331222 LIN9Q5TKA1 542 aa11.75□□□□□ -0.53
CLN8-201ENST00000331222 NCAPG2Q86XI2 1143 aa11.75□□□□□ -0.53
CLN8-201ENST00000331222 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.75□□□□□ -0.533e-6■■■■■ 29.3
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms