RNA–Protein interactions for RNA: ENST00000330891.9

BEST3-202, Transcript of bestrophin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BEST3, Length 3,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-202ENST00000330891 RTN1Q16799 776 aa8.12□□□□□ -1.11
BEST3-202ENST00000330891 E4F1Q66K89 784 aaPredicted RBP8.12□□□□□ -1.11
BEST3-202ENST00000330891 TRERF1Q96PN7 1200 aa8.12□□□□□ -1.11
BEST3-202ENST00000330891 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.12□□□□□ -1.11
BEST3-202ENST00000330891 AGXT2Q9BYV1 514 aa8.12□□□□□ -1.11
BEST3-202ENST00000330891 A0A0U1RQG5 324 aaPredicted RBP8.11□□□□□ -1.11
BEST3-202ENST00000330891 ADAMTS3O15072 1205 aa8.11□□□□□ -1.11
BEST3-202ENST00000330891 CRKLP46109 303 aaKnown RBP8.11□□□□□ -1.11
BEST3-202ENST00000330891 CHRNDQ07001 517 aa8.11□□□□□ -1.11
BEST3-202ENST00000330891 SLC39A14Q15043 492 aa8.11□□□□□ -1.11
BEST3-202ENST00000330891 PUM3Q15397 648 aaKnown RBP8.11□□□□□ -1.11
BEST3-202ENST00000330891 METTL16Q86W50 562 aaKnown RBP8.11□□□□□ -1.11
BEST3-202ENST00000330891 RASGRP4Q8TDF6 673 aa8.11□□□□□ -1.11
BEST3-202ENST00000330891 HINFPQ9BQA5 517 aa8.11□□□□□ -1.11
BEST3-202ENST00000330891 JCADQ9P266 1359 aa8.11□□□□□ -1.11
BEST3-202ENST00000330891 KDM4FA0A1W2PPD8 638 aa8.11□□□□□ -1.11
BEST3-202ENST00000330891 RAD21O60216 631 aa8.11□□□□□ -1.11
BEST3-202ENST00000330891 BMP6P22004 513 aa8.11□□□□□ -1.11
BEST3-202ENST00000330891 IGHMBP2P38935 993 aaKnown RBP8.11□□□□□ -1.11
BEST3-202ENST00000330891 FMR1Q06787 632 aaKnown RBP eCLIP8.11□□□□□ -1.11
BEST3-202ENST00000330891 MTF1Q14872 753 aa8.11□□□□□ -1.11
BEST3-202ENST00000330891 AATFQ9NY61 560 aaKnown RBP eCLIP8.11□□□□□ -1.11
BEST3-202ENST00000330891 OVOS2A0A0G2JMS6 1433 aa8.11□□□□□ -1.11
BEST3-202ENST00000330891 ZMYM6O95789 1325 aa8.11□□□□□ -1.11
BEST3-202ENST00000330891 NLRP12P59046 1061 aa8.11□□□□□ -1.11
BEST3-202ENST00000330891 AKNAD1Q5T1N1 836 aa8.11□□□□□ -1.11
BEST3-202ENST00000330891 RASGRP2Q7LDG7 609 aa8.11□□□□□ -1.11
BEST3-202ENST00000330891 LPIN2Q92539 896 aa8.11□□□□□ -1.11
BEST3-202ENST00000330891 FAM170AA1A519 330 aa8.1□□□□□ -1.11
BEST3-202ENST00000330891 SMTNL1A8MU46 457 aa8.1□□□□□ -1.11
BEST3-202ENST00000330891 PATL2C9JE40 543 aaKnown RBP8.1□□□□□ -1.11
BEST3-202ENST00000330891 TOP1P11387 765 aaKnown RBP8.1□□□□□ -1.11
BEST3-202ENST00000330891 TOB1P50616 345 aaPredicted RBP8.1□□□□□ -1.11
BEST3-202ENST00000330891 ITPK1Q13572 414 aa8.1□□□□□ -1.11
BEST3-202ENST00000330891 NCAPHQ15003 741 aa8.1□□□□□ -1.11
BEST3-202ENST00000330891 MRFAP1L1Q96HT8 127 aa8.1□□□□□ -1.11
BEST3-202ENST00000330891 CSRNP2Q9H175 543 aa8.1□□□□□ -1.11
BEST3-202ENST00000330891 LZTFL1Q9NQ48 299 aa8.1□□□□□ -1.11
BEST3-202ENST00000330891 POLR3EQ9NVU0 708 aa8.1□□□□□ -1.11
BEST3-202ENST00000330891 SRP68Q9UHB9 627 aaKnown RBP8.1□□□□□ -1.11
BEST3-202ENST00000330891 SLIT3O75094 1523 aa8.1□□□□□ -1.11
BEST3-202ENST00000330891 VWA3AA6NCI4 1184 aa8.1□□□□□ -1.11
BEST3-202ENST00000330891 CMA1P23946 247 aa8.1□□□□□ -1.11
BEST3-202ENST00000330891 CCT6AP40227 531 aaKnown RBP8.1□□□□□ -1.11
BEST3-202ENST00000330891 ERFEQ4G0M1 354 aa8.1□□□□□ -1.11
BEST3-202ENST00000330891 TRIM22Q8IYM9 498 aa8.1□□□□□ -1.11
BEST3-202ENST00000330891 KIF18AQ8NI77 898 aa8.1□□□□□ -1.11
BEST3-202ENST00000330891 PPP1R13BQ96KQ4 1090 aa8.1□□□□□ -1.11
BEST3-202ENST00000330891 RNF216Q9NWF9 866 aaPredicted RBP8.1□□□□□ -1.11
BEST3-202ENST00000330891 NFE2L3Q9Y4A8 694 aa8.1□□□□□ -1.11
BEST3-202ENST00000330891 PKD1L3Q7Z443 1732 aa8.1□□□□□ -1.11
BEST3-202ENST00000330891 USP17L12C9JPN9 530 aa8.09□□□□□ -1.11
BEST3-202ENST00000330891 USP17L21D6R901 530 aa8.09□□□□□ -1.11
BEST3-202ENST00000330891 POLR3GO15318 223 aaPredicted RBP8.09□□□□□ -1.11
BEST3-202ENST00000330891 MCM7P33993 719 aa8.09□□□□□ -1.11
BEST3-202ENST00000330891 NTRK3Q16288 839 aa8.09□□□□□ -1.11
BEST3-202ENST00000330891 KMT5BQ4FZB7 885 aa8.09□□□□□ -1.11
BEST3-202ENST00000330891 VGLL2Q8N8G2 317 aa8.09□□□□□ -1.11
BEST3-202ENST00000330891 CCDC34Q96HJ3 373 aa8.09□□□□□ -1.11
BEST3-202ENST00000330891 ZFP91Q96JP5 570 aaPredicted RBP8.09□□□□□ -1.11
BEST3-202ENST00000330891 PCMTD1Q96MG8 357 aaPredicted RBP8.09□□□□□ -1.11
BEST3-202ENST00000330891 AFDNP55196 1824 aaKnown RBP8.09□□□□□ -1.11
BEST3-202ENST00000330891 TNKSO95271 1327 aa8.09□□□□□ -1.11
BEST3-202ENST00000330891 EP400Q96L91 3159 aa8.09□□□□□ -1.11
BEST3-202ENST00000330891 SEC31AO94979 1220 aaKnown RBP8.09□□□□□ -1.11
BEST3-202ENST00000330891 YEATS4O95619 227 aa8.09□□□□□ -1.11
BEST3-202ENST00000330891 FBXO38Q6PIJ6 1188 aa8.09□□□□□ -1.11
BEST3-202ENST00000330891 BRAPQ7Z569 592 aa8.09□□□□□ -1.11
BEST3-202ENST00000330891 NOSTRINQ8IVI9 506 aa8.09□□□□□ -1.11
BEST3-202ENST00000330891 ZNF654Q8IZM8 581 aa8.09□□□□□ -1.11
BEST3-202ENST00000330891 JMYQ8N9B5 988 aa8.09□□□□□ -1.11
BEST3-202ENST00000330891 CELF1Q92879 486 aaKnown RBP8.09□□□□□ -1.11
BEST3-202ENST00000330891 GPKOWQ92917 476 aaPredicted RBP eCLIP8.09□□□□□ -1.11
BEST3-202ENST00000330891 NACAP1Q9BZK3 213 aa8.09□□□□□ -1.11
BEST3-202ENST00000330891 VAT1LQ9HCJ6 419 aa8.09□□□□□ -1.11
BEST3-202ENST00000330891 THSD7AQ9UPZ6 1657 aa8.09□□□□□ -1.11
BEST3-202ENST00000330891 SOS2Q07890 1332 aaPredicted RBP8.09□□□□□ -1.11
BEST3-202ENST00000330891 TCRBV5S4A2TA0A5A2 114 aa8.09□□□□□ -1.11
BEST3-202ENST00000330891 TEX33O43247 280 aa8.09□□□□□ -1.11
BEST3-202ENST00000330891 PTPAQ15257 358 aa8.09□□□□□ -1.11
BEST3-202ENST00000330891 TTF1Q15361 905 aaPredicted RBP8.09□□□□□ -1.11
BEST3-202ENST00000330891 RIC1Q4ADV7 1423 aa8.08□□□□□ -1.12
BEST3-202ENST00000330891 CDKL5O76039 1030 aa8.08□□□□□ -1.12
BEST3-202ENST00000330891 GNG11P61952 73 aa8.08□□□□□ -1.12
BEST3-202ENST00000330891 PPARAQ07869 468 aa8.08□□□□□ -1.12
BEST3-202ENST00000330891 SART3Q15020 963 aaKnown RBP8.08□□□□□ -1.12
BEST3-202ENST00000330891 DDB1Q16531 1140 aa8.08□□□□□ -1.12
BEST3-202ENST00000330891 KRBA2Q6ZNG9 492 aa8.08□□□□□ -1.12
BEST3-202ENST00000330891 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.08□□□□□ -1.12
BEST3-202ENST00000330891 KRI1Q8N9T8 703 aaKnown RBP8.08□□□□□ -1.12
BEST3-202ENST00000330891 FANCBQ8NB91 859 aa8.08□□□□□ -1.12
BEST3-202ENST00000330891 CARD6Q9BX69 1037 aa8.08□□□□□ -1.12
BEST3-202ENST00000330891 A0A087X0B3 334 aa8.08□□□□□ -1.12
BEST3-202ENST00000330891 LOC102724428A0A0B4J2F2 783 aa8.08□□□□□ -1.12
BEST3-202ENST00000330891 MAGEB6P1A0A0J9YX57 407 aa8.08□□□□□ -1.12
BEST3-202ENST00000330891 GOLGA8HP0CJ92 632 aa8.08□□□□□ -1.12
BEST3-202ENST00000330891 PDIA4P13667 645 aaKnown RBP8.08□□□□□ -1.12
BEST3-202ENST00000330891 PRDX5P30044 214 aa8.08□□□□□ -1.12
BEST3-202ENST00000330891 SIK1P57059 783 aa8.08□□□□□ -1.12
BEST3-202ENST00000330891 MYL5Q02045 173 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms