RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 GPR75-ASB3A0A0A6YYF3 556 aa19.78■□□□□ 0.76
DDX41-201ENST00000330503 GTF2IP78347 998 aa19.78■□□□□ 0.76
DDX41-201ENST00000330503 C12orf60Q5U649 245 aa19.78■□□□□ 0.76
DDX41-201ENST00000330503 ZNF654Q8IZM8 581 aa19.78■□□□□ 0.76
DDX41-201ENST00000330503 TBC1D22AQ8WUA7 517 aa19.78■□□□□ 0.76
DDX41-201ENST00000330503 FAM163AQ96GL9 167 aaPredicted RBP19.78■□□□□ 0.76
DDX41-201ENST00000330503 PGBD1Q96JS3 809 aa19.78■□□□□ 0.76
DDX41-201ENST00000330503 STK32BQ9NY57 414 aa19.78■□□□□ 0.76
DDX41-201ENST00000330503 CFAP45Q9UL16 551 aa19.78■□□□□ 0.76
DDX41-201ENST00000330503 LAMB1P07942 1786 aa19.77■□□□□ 0.76
DDX41-201ENST00000330503 IFNAR1P17181 557 aa19.77■□□□□ 0.76
DDX41-201ENST00000330503 IARSP41252 1262 aaKnown RBP19.77■□□□□ 0.76
DDX41-201ENST00000330503 USP5P45974 858 aa19.77■□□□□ 0.76
DDX41-201ENST00000330503 CCDC183Q5T5S1 534 aa19.77■□□□□ 0.76
DDX41-201ENST00000330503 DPP8Q6V1X1 898 aaPredicted RBP19.77■□□□□ 0.76
DDX41-201ENST00000330503 ALG1Q9BT22 464 aa19.77■□□□□ 0.76
DDX41-201ENST00000330503 ZC3H12CQ9C0D7 883 aaKnown RBP19.77■□□□□ 0.76
DDX41-201ENST00000330503 RBSNQ9H1K0 784 aa19.77■□□□□ 0.76
DDX41-201ENST00000330503 RCOR1Q9UKL0 485 aa19.77■□□□□ 0.76
DDX41-201ENST00000330503 RCAN1P53805 252 aa19.76■□□□□ 0.75
DDX41-201ENST00000330503 RTN1Q16799 776 aa19.76■□□□□ 0.75
DDX41-201ENST00000330503 TGFBRAP1Q8WUH2 860 aa19.76■□□□□ 0.75
DDX41-201ENST00000330503 FTOQ9C0B1 505 aaKnown RBP eCLIP19.76■□□□□ 0.75
DDX41-201ENST00000330503 UBE2Q2LH0YL09 131 aa19.76■□□□□ 0.75
DDX41-201ENST00000330503 FMNL1O95466 1100 aaPredicted RBP19.76■□□□□ 0.75
DDX41-201ENST00000330503 BTDP43251 543 aa19.76■□□□□ 0.75
DDX41-201ENST00000330503 ATL3Q6DD88 541 aa19.76■□□□□ 0.75
DDX41-201ENST00000330503 STYK1Q6J9G0 422 aa19.76■□□□□ 0.75
DDX41-201ENST00000330503 FANCBQ8NB91 859 aa19.76■□□□□ 0.75
DDX41-201ENST00000330503 USP28Q96RU2 1077 aa19.76■□□□□ 0.75
DDX41-201ENST00000330503 SLC3A2P08195 630 aaKnown RBP19.75■□□□□ 0.75
DDX41-201ENST00000330503 SSRP1Q08945 709 aaKnown RBP19.75■□□□□ 0.75
DDX41-201ENST00000330503 DOK7Q18PE1 504 aa19.75■□□□□ 0.75
DDX41-201ENST00000330503 FAM47AQ5JRC9 791 aa19.75■□□□□ 0.75
DDX41-201ENST00000330503 NBPF11Q86T75 865 aa19.75■□□□□ 0.75
DDX41-201ENST00000330503 NOL10Q9BSC4 688 aaKnown RBP19.75■□□□□ 0.75
DDX41-201ENST00000330503 STK36Q9NRP7 1315 aa19.75■□□□□ 0.75
DDX41-201ENST00000330503 KIF28PB7ZC32 967 aa19.75■□□□□ 0.75
DDX41-201ENST00000330503 H0YIN7 160 aa19.75■□□□□ 0.75
DDX41-201ENST00000330503 LIG1P18858 919 aa19.75■□□□□ 0.75
DDX41-201ENST00000330503 CEBPZQ03701 1054 aaKnown RBP19.75■□□□□ 0.75
DDX41-201ENST00000330503 SLC4A8Q2Y0W8 1093 aa19.75■□□□□ 0.75
DDX41-201ENST00000330503 ZNF396Q96N95 335 aaPredicted RBP19.75■□□□□ 0.75
DDX41-201ENST00000330503 SLC26A6Q9BXS9 759 aa19.75■□□□□ 0.75
DDX41-201ENST00000330503 GAKO14976 1311 aa19.75■□□□□ 0.75
DDX41-201ENST00000330503 RHBDL3P58872 404 aa19.74■□□□□ 0.75
DDX41-201ENST00000330503 KIF23Q02241 960 aaPredicted RBP19.74■□□□□ 0.75
DDX41-201ENST00000330503 PDE4BQ07343 736 aa19.74■□□□□ 0.75
DDX41-201ENST00000330503 IQCA1Q86XH1 822 aa19.74■□□□□ 0.75
DDX41-201ENST00000330503 CRACR2BQ8N4Y2 399 aaPredicted RBP19.74■□□□□ 0.75
DDX41-201ENST00000330503 CERS5Q8N5B7 392 aa19.74■□□□□ 0.75
DDX41-201ENST00000330503 NUP133Q8WUM0 1156 aa19.74■□□□□ 0.75
DDX41-201ENST00000330503 ECM29Q5VYK3 1845 aa19.73■□□□□ 0.75
DDX41-201ENST00000330503 DLEC1Q9Y238 1755 aa19.73■□□□□ 0.75
DDX41-201ENST00000330503 NMT2O60551 498 aa19.73■□□□□ 0.75
DDX41-201ENST00000330503 CHRNA5P30532 468 aa19.73■□□□□ 0.75
DDX41-201ENST00000330503 GUCY1A2P33402 732 aa19.73■□□□□ 0.75
DDX41-201ENST00000330503 IFIT1BQ5T764 474 aaKnown RBP19.73■□□□□ 0.75
DDX41-201ENST00000330503 KRT40Q6A162 431 aa19.73■□□□□ 0.75
DDX41-201ENST00000330503 MAPKAPK5Q8IW41 473 aa19.73■□□□□ 0.75
DDX41-201ENST00000330503 DYNLL2Q96FJ2 89 aa19.73■□□□□ 0.75
DDX41-201ENST00000330503 PDGFDQ9GZP0 370 aaPredicted RBP19.73■□□□□ 0.75
DDX41-201ENST00000330503 POLR3DP05423 398 aaPredicted RBP19.73■□□□□ 0.75
DDX41-201ENST00000330503 CERS3Q8IU89 383 aa19.73■□□□□ 0.75
DDX41-201ENST00000330503 CMTR1Q8N1G2 835 aaKnown RBP19.73■□□□□ 0.75
DDX41-201ENST00000330503 CDK5RAP2Q96SN8 1893 aa19.73■□□□□ 0.75
DDX41-201ENST00000330503 QSER1Q2KHR3 1735 aa19.73■□□□□ 0.75
DDX41-201ENST00000330503 PLCD1P51178 756 aa19.72■□□□□ 0.75
DDX41-201ENST00000330503 SLF2Q8IX21 1173 aa19.72■□□□□ 0.75
DDX41-201ENST00000330503 TEX11Q8IYF3 940 aa19.72■□□□□ 0.75
DDX41-201ENST00000330503 MXD3Q9BW11 206 aa19.72■□□□□ 0.75
DDX41-201ENST00000330503 TMX4Q9H1E5 349 aaPredicted RBP19.72■□□□□ 0.75
DDX41-201ENST00000330503 SLX4Q8IY92 1834 aa19.72■□□□□ 0.75
DDX41-201ENST00000330503 ROBO3Q96MS0 1386 aa19.72■□□□□ 0.75
DDX41-201ENST00000330503 CCDC196A0A1B0GTZ2 297 aa19.72■□□□□ 0.75
DDX41-201ENST00000330503 LETM1O95202 739 aaPredicted RBP19.72■□□□□ 0.75
DDX41-201ENST00000330503 TROAPQ12815 778 aa19.72■□□□□ 0.75
DDX41-201ENST00000330503 BRAPQ7Z569 592 aa19.72■□□□□ 0.75
DDX41-201ENST00000330503 SAP30BPQ9UHR5 308 aaKnown RBP19.72■□□□□ 0.75
DDX41-201ENST00000330503 FBXO41Q8TF61 875 aa19.71■□□□□ 0.75
DDX41-201ENST00000330503 RTEL1Q9NZ71 1219 aa19.71■□□□□ 0.75
DDX41-201ENST00000330503 SUGT1Q9Y2Z0 365 aa19.71■□□□□ 0.75
DDX41-201ENST00000330503 DAGLAQ9Y4D2 1042 aa19.71■□□□□ 0.75
DDX41-201ENST00000330503 GOLGA6L4A6NEF3 574 aa19.7■□□□□ 0.74
DDX41-201ENST00000330503 PLCG2P16885 1265 aa19.7■□□□□ 0.74
DDX41-201ENST00000330503 FUT2Q10981 343 aa19.7■□□□□ 0.74
DDX41-201ENST00000330503 PPP2R5BQ15173 497 aa19.7■□□□□ 0.74
DDX41-201ENST00000330503 CATIPQ7Z7H3 387 aa19.7■□□□□ 0.74
DDX41-201ENST00000330503 CCDC82Q8N4S0 544 aa19.7■□□□□ 0.74
DDX41-201ENST00000330503 C7orf43Q8WVR3 580 aa19.7■□□□□ 0.74
DDX41-201ENST00000330503 FBXW7Q969H0 707 aa19.7■□□□□ 0.74
DDX41-201ENST00000330503 EYA3Q99504 573 aa19.7■□□□□ 0.74
DDX41-201ENST00000330503 TSPY26PQ9H489 355 aa19.7■□□□□ 0.74
DDX41-201ENST00000330503 NAV1Q8NEY1 1877 aa19.7■□□□□ 0.74
DDX41-201ENST00000330503 NASPP49321 788 aaPredicted RBP19.7■□□□□ 0.74
DDX41-201ENST00000330503 MYSM1Q5VVJ2 828 aa19.7■□□□□ 0.74
DDX41-201ENST00000330503 RCSD1Q6JBY9 416 aa19.7■□□□□ 0.74
DDX41-201ENST00000330503 DEFB132Q7Z7B7 95 aa19.7■□□□□ 0.74
DDX41-201ENST00000330503 KCNQ5Q9NR82 932 aa19.7■□□□□ 0.74
DDX41-201ENST00000330503 TFAP4Q01664 338 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 155.7 ms