RNA–Protein interactions for RNA: ENST00000328863.8

CLRN1-203, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-203ENST00000328863 STAP2Q9UGK3 403 aa17.88■□□□□ 0.45
CLRN1-203ENST00000328863 PHIPQ8WWQ0 1821 aa17.87■□□□□ 0.45
CLRN1-203ENST00000328863 PPIL2Q13356 520 aa17.87■□□□□ 0.45
CLRN1-203ENST00000328863 SCYL3Q8IZE3 742 aa17.87■□□□□ 0.45
CLRN1-203ENST00000328863 APPBP2Q92624 585 aa17.87■□□□□ 0.45
CLRN1-203ENST00000328863 DDRGK1Q96HY6 314 aa17.87■□□□□ 0.45
CLRN1-203ENST00000328863 PICK1Q9NRD5 415 aa17.87■□□□□ 0.45
CLRN1-203ENST00000328863 SAP30BPQ9UHR5 308 aaKnown RBP17.87■□□□□ 0.45
CLRN1-203ENST00000328863 HSPA8P11142 646 aaKnown RBP17.86■□□□□ 0.45
CLRN1-203ENST00000328863 INHBEP58166 350 aa17.86■□□□□ 0.45
CLRN1-203ENST00000328863 MAP3K10Q02779 954 aa17.86■□□□□ 0.45
CLRN1-203ENST00000328863 PPATQ06203 517 aa17.86■□□□□ 0.45
CLRN1-203ENST00000328863 ARMT1Q9H993 441 aa17.86■□□□□ 0.45
CLRN1-203ENST00000328863 FAM196BA6NMK8 535 aa17.85■□□□□ 0.45
CLRN1-203ENST00000328863 ALDH1A1P00352 501 aa17.85■□□□□ 0.45
CLRN1-203ENST00000328863 GJA5P36382 358 aa17.85■□□□□ 0.45
CLRN1-203ENST00000328863 GTF2A2P52657 109 aa17.85■□□□□ 0.45
CLRN1-203ENST00000328863 TTC6Q86TZ1 520 aa17.85■□□□□ 0.45
CLRN1-203ENST00000328863 AMOTL1Q8IY63 956 aa17.85■□□□□ 0.45
CLRN1-203ENST00000328863 CNKSR2Q8WXI2 1034 aa17.85■□□□□ 0.45
CLRN1-203ENST00000328863 EVI5LQ96CN4 794 aa17.85■□□□□ 0.45
CLRN1-203ENST00000328863 EHD4Q9H223 541 aa17.85■□□□□ 0.45
CLRN1-203ENST00000328863 PALD1Q9ULE6 856 aa17.85■□□□□ 0.45
CLRN1-203ENST00000328863 PHF20L1A8MW92 1017 aa17.84■□□□□ 0.45
CLRN1-203ENST00000328863 RNF113AO15541 343 aaKnown RBP17.84■□□□□ 0.45
CLRN1-203ENST00000328863 CTNND1O60716 968 aaKnown RBP17.84■□□□□ 0.45
CLRN1-203ENST00000328863 NEFLP07196 543 aa17.84■□□□□ 0.45
CLRN1-203ENST00000328863 CENPBP07199 599 aaPredicted RBP17.84■□□□□ 0.45
CLRN1-203ENST00000328863 TM4SF4P48230 202 aa17.84■□□□□ 0.45
CLRN1-203ENST00000328863 OTUD7BQ6GQQ9 843 aa17.84■□□□□ 0.45
CLRN1-203ENST00000328863 SDR42E1Q8WUS8 393 aa17.84■□□□□ 0.45
CLRN1-203ENST00000328863 PRDM10Q9NQV6 1147 aa17.84■□□□□ 0.45
CLRN1-203ENST00000328863 LOC285556D6RIA3 1793 aa17.84■□□□□ 0.45
CLRN1-203ENST00000328863 SNAPC2Q13487 334 aa17.83■□□□□ 0.44
CLRN1-203ENST00000328863 SLC4A8Q2Y0W8 1093 aa17.83■□□□□ 0.44
CLRN1-203ENST00000328863 SLFNL1Q499Z3 407 aa17.83■□□□□ 0.44
CLRN1-203ENST00000328863 FOXP4Q8IVH2 680 aaPredicted RBP17.83■□□□□ 0.44
CLRN1-203ENST00000328863 ATP8A2Q9NTI2 1148 aa17.83■□□□□ 0.44
CLRN1-203ENST00000328863 RNF186Q9NXI6 227 aa17.83■□□□□ 0.44
CLRN1-203ENST00000328863 MCM9Q9NXL9 1143 aa17.83■□□□□ 0.44
CLRN1-203ENST00000328863 SERPINB13Q9UIV8 391 aa17.83■□□□□ 0.44
CLRN1-203ENST00000328863 CCL15-CCL14A0A0B4J2E2 113 aa17.82■□□□□ 0.44
CLRN1-203ENST00000328863 IRF6O14896 467 aa17.82■□□□□ 0.44
CLRN1-203ENST00000328863 POLR3DP05423 398 aaPredicted RBP17.82■□□□□ 0.44
CLRN1-203ENST00000328863 CETPP11597 493 aa17.82■□□□□ 0.44
CLRN1-203ENST00000328863 LBX1P52954 281 aa17.82■□□□□ 0.44
CLRN1-203ENST00000328863 CCL15Q16663 113 aa17.82■□□□□ 0.44
CLRN1-203ENST00000328863 IFNL1Q8IU54 200 aa17.82■□□□□ 0.44
CLRN1-203ENST00000328863 TBC1D2Q9BYX2 928 aa17.82■□□□□ 0.44
CLRN1-203ENST00000328863 PUS7LQ9H0K6 701 aaKnown RBP17.82■□□□□ 0.44
CLRN1-203ENST00000328863 OSBPL3Q9H4L5 887 aa17.82■□□□□ 0.44
CLRN1-203ENST00000328863 DCP1AQ9NPI6 582 aaPredicted RBP17.82■□□□□ 0.44
CLRN1-203ENST00000328863 TSKSQ9UJT2 592 aa17.82■□□□□ 0.44
CLRN1-203ENST00000328863 SLC4A4Q9Y6R1 1079 aa17.82■□□□□ 0.44
CLRN1-203ENST00000328863 TESPA1A2RU30 521 aaPredicted RBP17.81■□□□□ 0.44
CLRN1-203ENST00000328863 GPAA1O43292 621 aa17.81■□□□□ 0.44
CLRN1-203ENST00000328863 TRPA1O75762 1119 aa17.81■□□□□ 0.44
CLRN1-203ENST00000328863 CHGBP05060 677 aa17.81■□□□□ 0.44
CLRN1-203ENST00000328863 GNAT2P19087 354 aa17.81■□□□□ 0.44
CLRN1-203ENST00000328863 METTL16Q86W50 562 aaKnown RBP17.81■□□□□ 0.44
CLRN1-203ENST00000328863 DNAJC18Q9H819 358 aa17.81■□□□□ 0.44
CLRN1-203ENST00000328863 ARPP21Q9UBL0 812 aaPredicted RBP17.81■□□□□ 0.44
CLRN1-203ENST00000328863 TAOK2Q9UL54 1235 aa17.81■□□□□ 0.44
CLRN1-203ENST00000328863 TRIM6-TRIM34B2RNG4 842 aa17.8■□□□□ 0.44
CLRN1-203ENST00000328863 ASNSP08243 561 aa17.8■□□□□ 0.44
CLRN1-203ENST00000328863 SLURP2P0DP57 97 aa17.8■□□□□ 0.44
CLRN1-203ENST00000328863 CAP2P40123 477 aa17.8■□□□□ 0.44
CLRN1-203ENST00000328863 TICAM2Q86XR7 235 aa17.8■□□□□ 0.44
CLRN1-203ENST00000328863 PLEKHM2Q8IWE5 1019 aa17.8■□□□□ 0.44
CLRN1-203ENST00000328863 MS4A4AQ96JQ5 239 aa17.8■□□□□ 0.44
CLRN1-203ENST00000328863 AS3MTQ9HBK9 375 aa17.8■□□□□ 0.44
CLRN1-203ENST00000328863 GINM1Q9NU53 330 aa17.8■□□□□ 0.44
CLRN1-203ENST00000328863 KCNH4Q9UQ05 1017 aa17.8■□□□□ 0.44
CLRN1-203ENST00000328863 IGF2BP3O00425 579 aaKnown RBP eCLIP17.79■□□□□ 0.44
CLRN1-203ENST00000328863 PTPRAP18433 802 aa17.79■□□□□ 0.44
CLRN1-203ENST00000328863 BRI3BPQ8WY22 251 aa17.79■□□□□ 0.44
CLRN1-203ENST00000328863 OSBP2Q969R2 916 aa17.79■□□□□ 0.44
CLRN1-203ENST00000328863 CFHR5Q9BXR6 569 aa17.79■□□□□ 0.44
CLRN1-203ENST00000328863 ZCCHC17Q9NP64 241 aaKnown RBP17.79■□□□□ 0.44
CLRN1-203ENST00000328863 ZHX2Q9Y6X8 837 aa17.79■□□□□ 0.44
CLRN1-203ENST00000328863 CASP8AP2Q9UKL3 1982 aa17.79■□□□□ 0.44
CLRN1-203ENST00000328863 M0R2C6 588 aa17.78■□□□□ 0.44
CLRN1-203ENST00000328863 PRKAB2O43741 272 aa17.78■□□□□ 0.44
CLRN1-203ENST00000328863 ZMYM1Q5SVZ6 1142 aa17.78■□□□□ 0.44
CLRN1-203ENST00000328863 STRBPQ96SI9 672 aaKnown RBP17.78■□□□□ 0.44
CLRN1-203ENST00000328863 SWAP70Q9UH65 585 aa17.78■□□□□ 0.44
CLRN1-203ENST00000328863 ZBTB21Q9ULJ3 1066 aa17.78■□□□□ 0.44
CLRN1-203ENST00000328863 CXCL11O14625 94 aa17.77■□□□□ 0.44
CLRN1-203ENST00000328863 GDF11O95390 407 aa17.77■□□□□ 0.44
CLRN1-203ENST00000328863 GIMAP6Q6P9H5 292 aa17.77■□□□□ 0.44
CLRN1-203ENST00000328863 CENPQQ7L2Z9 268 aaPredicted RBP17.77■□□□□ 0.44
CLRN1-203ENST00000328863 RILPL2Q969X0 211 aa17.77■□□□□ 0.44
CLRN1-203ENST00000328863 NACAP1Q9BZK3 213 aa17.77■□□□□ 0.44
CLRN1-203ENST00000328863 A0A0G2JLL6 359 aaPredicted RBP17.76■□□□□ 0.43
CLRN1-203ENST00000328863 USP17L5A8MUK1 530 aa17.76■□□□□ 0.43
CLRN1-203ENST00000328863 TDO2P48775 406 aa17.76■□□□□ 0.43
CLRN1-203ENST00000328863 PLCD1P51178 756 aa17.76■□□□□ 0.43
CLRN1-203ENST00000328863 TAF1CQ15572 869 aaPredicted RBP17.76■□□□□ 0.43
CLRN1-203ENST00000328863 NOM1Q5C9Z4 860 aaKnown RBP17.76■□□□□ 0.43
CLRN1-203ENST00000328863 TATDN1Q6P1N9 297 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms