RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 WASF1Q92558 559 aa16.14■□□□□ 0.17
ATP2C1-201ENST00000328560 TMX1Q9H3N1 280 aa16.14■□□□□ 0.17
ATP2C1-201ENST00000328560 PCDHB6Q9Y5E3 794 aa16.14■□□□□ 0.17
ATP2C1-201ENST00000328560 SPEF2Q9C093 1822 aa16.14■□□□□ 0.17
ATP2C1-201ENST00000328560 PDE4BQ07343 736 aa16.14■□□□□ 0.17
ATP2C1-201ENST00000328560 CCDC152Q4G0S7 254 aa16.14■□□□□ 0.17
ATP2C1-201ENST00000328560 TIGD1Q96MW7 591 aa16.14■□□□□ 0.17
ATP2C1-201ENST00000328560 CCDC87Q9NVE4 849 aa16.14■□□□□ 0.17
ATP2C1-201ENST00000328560 SERTAD1Q9UHV2 236 aa16.14■□□□□ 0.17
ATP2C1-201ENST00000328560 IFNAR1P17181 557 aa16.13■□□□□ 0.17
ATP2C1-201ENST00000328560 CDCA7Q9BWT1 371 aaPredicted RBP16.13■□□□□ 0.17
ATP2C1-201ENST00000328560 TUBE1Q9UJT0 475 aa16.13■□□□□ 0.17
ATP2C1-201ENST00000328560 UBR2Q8IWV8 1755 aa16.13■□□□□ 0.17
ATP2C1-201ENST00000328560 CYP2D7A0A087X1C5 515 aa16.13■□□□□ 0.17
ATP2C1-201ENST00000328560 GYG1P46976 350 aa16.13■□□□□ 0.17
ATP2C1-201ENST00000328560 ALX1Q15699 326 aa16.13■□□□□ 0.17
ATP2C1-201ENST00000328560 CGNQ9P2M7 1197 aaKnown RBP16.13■□□□□ 0.17
ATP2C1-201ENST00000328560 DNAI1Q9UI46 699 aa16.13■□□□□ 0.17
ATP2C1-201ENST00000328560 IKBKBO14920 756 aa16.13■□□□□ 0.17
ATP2C1-201ENST00000328560 MMP1P03956 469 aa16.13■□□□□ 0.17
ATP2C1-201ENST00000328560 TOB1P50616 345 aaPredicted RBP16.13■□□□□ 0.17
ATP2C1-201ENST00000328560 BICDL1Q6ZP65 573 aa16.13■□□□□ 0.17
ATP2C1-201ENST00000328560 KDM4FA0A1W2PPD8 638 aa16.12■□□□□ 0.17
ATP2C1-201ENST00000328560 PRR29P0C7W0 189 aa16.12■□□□□ 0.17
ATP2C1-201ENST00000328560 CHRNDQ07001 517 aa16.12■□□□□ 0.17
ATP2C1-201ENST00000328560 USP49Q70CQ1 688 aa16.12■□□□□ 0.17
ATP2C1-201ENST00000328560 ZNF654Q8IZM8 581 aa16.12■□□□□ 0.17
ATP2C1-201ENST00000328560 HSD3B7Q9H2F3 369 aa16.12■□□□□ 0.17
ATP2C1-201ENST00000328560 CBFA2T2O43439 604 aa16.12■□□□□ 0.17
ATP2C1-201ENST00000328560 SLU7O95391 586 aaKnown RBP16.12■□□□□ 0.17
ATP2C1-201ENST00000328560 CRKLP46109 303 aaKnown RBP16.12■□□□□ 0.17
ATP2C1-201ENST00000328560 KLHL10Q6JEL2 608 aa16.12■□□□□ 0.17
ATP2C1-201ENST00000328560 VPS54Q9P1Q0 977 aa16.12■□□□□ 0.17
ATP2C1-201ENST00000328560 FANCBQ8NB91 859 aa16.11■□□□□ 0.17
ATP2C1-201ENST00000328560 HOOK1Q9UJC3 728 aaKnown RBP16.11■□□□□ 0.17
ATP2C1-201ENST00000328560 ZNF652Q9Y2D9 606 aa16.11■□□□□ 0.17
ATP2C1-201ENST00000328560 FAM205CA6NFA0 338 aa16.11■□□□□ 0.17
ATP2C1-201ENST00000328560 PPARAQ07869 468 aa16.11■□□□□ 0.17
ATP2C1-201ENST00000328560 SLC4A8Q2Y0W8 1093 aa16.11■□□□□ 0.17
ATP2C1-201ENST00000328560 MYH15Q9Y2K3 1946 aa16.11■□□□□ 0.17
ATP2C1-201ENST00000328560 BCL9O00512 1426 aa16.11■□□□□ 0.17
ATP2C1-201ENST00000328560 AFMP43652 599 aa16.11■□□□□ 0.17
ATP2C1-201ENST00000328560 POSTNQ15063 836 aa16.11■□□□□ 0.17
ATP2C1-201ENST00000328560 ADGRA1Q86SQ6 560 aa16.11■□□□□ 0.17
ATP2C1-201ENST00000328560 CRACR2BQ8N4Y2 399 aaPredicted RBP16.11■□□□□ 0.17
ATP2C1-201ENST00000328560 LOC102724428A0A0B4J2F2 783 aa16.1■□□□□ 0.17
ATP2C1-201ENST00000328560 BMP6P22004 513 aa16.1■□□□□ 0.17
ATP2C1-201ENST00000328560 SIK1P57059 783 aa16.1■□□□□ 0.17
ATP2C1-201ENST00000328560 PARP10Q53GL7 1025 aa16.1■□□□□ 0.17
ATP2C1-201ENST00000328560 SMARCE1Q969G3 411 aa16.1■□□□□ 0.17
ATP2C1-201ENST00000328560 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.1■□□□□ 0.17
ATP2C1-201ENST00000328560 NFE2L3Q9Y4A8 694 aa16.1■□□□□ 0.17
ATP2C1-201ENST00000328560 CCDC196A0A1B0GTZ2 297 aa16.1■□□□□ 0.17
ATP2C1-201ENST00000328560 DEXIO95424 95 aa16.1■□□□□ 0.17
ATP2C1-201ENST00000328560 ERCC6LQ2NKX8 1250 aa16.1■□□□□ 0.17
ATP2C1-201ENST00000328560 DHX58Q96C10 678 aa16.1■□□□□ 0.17
ATP2C1-201ENST00000328560 MAN1B1Q9UKM7 699 aa16.1■□□□□ 0.17
ATP2C1-201ENST00000328560 KIF2AO00139 706 aaPredicted RBP16.1■□□□□ 0.17
ATP2C1-201ENST00000328560 ZSCAN20P17040 1043 aaPredicted RBP16.1■□□□□ 0.17
ATP2C1-201ENST00000328560 EIF5P55010 431 aaKnown RBP16.1■□□□□ 0.17
ATP2C1-201ENST00000328560 DYNLL1P63167 89 aaKnown RBP16.1■□□□□ 0.17
ATP2C1-201ENST00000328560 LRRN4CLQ8ND94 238 aa16.1■□□□□ 0.17
ATP2C1-201ENST00000328560 RNF41Q9H4P4 317 aaPredicted RBP16.1■□□□□ 0.17
ATP2C1-201ENST00000328560 TNKSO95271 1327 aa16.1■□□□□ 0.17
ATP2C1-201ENST00000328560 MAGEB6P1A0A0J9YX57 407 aa16.09■□□□□ 0.17
ATP2C1-201ENST00000328560 ATRNO75882 1429 aa16.09■□□□□ 0.17
ATP2C1-201ENST00000328560 GNAT2P19087 354 aa16.09■□□□□ 0.17
ATP2C1-201ENST00000328560 KCNQ4P56696 695 aa16.09■□□□□ 0.17
ATP2C1-201ENST00000328560 RILPL1Q5EBL4 403 aa16.09■□□□□ 0.17
ATP2C1-201ENST00000328560 STAG1Q8WVM7 1258 aa16.09■□□□□ 0.17
ATP2C1-201ENST00000328560 ERO1AQ96HE7 468 aa16.09■□□□□ 0.17
ATP2C1-201ENST00000328560 AKAP11Q9UKA4 1901 aa16.09■□□□□ 0.17
ATP2C1-201ENST00000328560 MYO5AQ9Y4I1 1855 aaKnown RBP16.09■□□□□ 0.17
ATP2C1-201ENST00000328560 URI1O94763 535 aaPredicted RBP16.09■□□□□ 0.17
ATP2C1-201ENST00000328560 CASP1P29466 404 aa16.09■□□□□ 0.17
ATP2C1-201ENST00000328560 STX17P56962 302 aa16.09■□□□□ 0.17
ATP2C1-201ENST00000328560 SMIM5Q71RC9 77 aa16.09■□□□□ 0.17
ATP2C1-201ENST00000328560 CSRNP2Q9H175 543 aa16.09■□□□□ 0.17
ATP2C1-201ENST00000328560 V9GY48 417 aaPredicted RBP16.09■□□□□ 0.17
ATP2C1-201ENST00000328560 FMR1Q06787 632 aaKnown RBP eCLIP16.09■□□□□ 0.172e-20■■■■■ 71.1
ATP2C1-201ENST00000328560 KMT5BQ4FZB7 885 aa16.09■□□□□ 0.17
ATP2C1-201ENST00000328560 INTS5Q6P9B9 1019 aaKnown RBP16.09■□□□□ 0.17
ATP2C1-201ENST00000328560 CREBRFQ8IUR6 639 aa16.09■□□□□ 0.17
ATP2C1-201ENST00000328560 CDC5LQ99459 802 aaKnown RBP16.09■□□□□ 0.17
ATP2C1-201ENST00000328560 GNL3LQ9NVN8 582 aaKnown RBP16.09■□□□□ 0.17
ATP2C1-201ENST00000328560 FBXO2Q9UK22 296 aaPredicted RBP16.09■□□□□ 0.17
ATP2C1-201ENST00000328560 ADKP55263 362 aaKnown RBP16.08■□□□□ 0.16
ATP2C1-201ENST00000328560 SYCP1Q15431 976 aa16.08■□□□□ 0.16
ATP2C1-201ENST00000328560 ESR2Q92731 530 aa16.08■□□□□ 0.16
ATP2C1-201ENST00000328560 TOGARAM1Q9Y4F4 1720 aa16.08■□□□□ 0.16
ATP2C1-201ENST00000328560 PTPREP23469 700 aa16.08■□□□□ 0.16
ATP2C1-201ENST00000328560 PIP4K2BP78356 416 aa16.08■□□□□ 0.16
ATP2C1-201ENST00000328560 FBXO38Q6PIJ6 1188 aa16.08■□□□□ 0.16
ATP2C1-201ENST00000328560 STAMQ92783 540 aa16.08■□□□□ 0.16
ATP2C1-201ENST00000328560 JAG2Q9Y219 1238 aa16.08■□□□□ 0.16
ATP2C1-201ENST00000328560 STK36Q9NRP7 1315 aa16.07■□□□□ 0.16
ATP2C1-201ENST00000328560 PSDA5PKW4 1024 aaPredicted RBP16.07■□□□□ 0.16
ATP2C1-201ENST00000328560 PDE4CQ08493 712 aa16.07■□□□□ 0.16
ATP2C1-201ENST00000328560 VSTM4Q8IW00 320 aa16.07■□□□□ 0.16
ATP2C1-201ENST00000328560 TMTC2Q8N394 836 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms