RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 CYP27C1Q4G0S4 372 aa2.87□□□□□ -1.95
CCDC144A-201ENST00000328495 ZC3H12AQ5D1E8 599 aaKnown RBP2.87□□□□□ -1.95
CCDC144A-201ENST00000328495 DTX1Q86Y01 620 aa2.87□□□□□ -1.95
CCDC144A-201ENST00000328495 RNF214Q8ND24 703 aa2.87□□□□□ -1.95
CCDC144A-201ENST00000328495 GATA6Q92908 595 aa2.87□□□□□ -1.95
CCDC144A-201ENST00000328495 SSU72Q9NP77 194 aaKnown RBP2.87□□□□□ -1.95
CCDC144A-201ENST00000328495 DYNC1LI2O43237 492 aaPredicted RBP2.87□□□□□ -1.95
CCDC144A-201ENST00000328495 MED26O95402 600 aa2.87□□□□□ -1.95
CCDC144A-201ENST00000328495 SEZ6L2Q6UXD5 910 aa2.87□□□□□ -1.95
CCDC144A-201ENST00000328495 GRIN3AQ8TCU5 1115 aa2.87□□□□□ -1.95
CCDC144A-201ENST00000328495 LGR6Q9HBX8 967 aa2.87□□□□□ -1.95
CCDC144A-201ENST00000328495 C1GALT1Q9NS00 363 aa2.87□□□□□ -1.95
CCDC144A-201ENST00000328495 CACNA2D2Q9NY47 1150 aa2.87□□□□□ -1.95
CCDC144A-201ENST00000328495 PARP2Q9UGN5 583 aa2.87□□□□□ -1.95
CCDC144A-201ENST00000328495 PCOLCE2Q9UKZ9 415 aa2.87□□□□□ -1.95
CCDC144A-201ENST00000328495 PCDHA4Q9UN74 947 aa2.87□□□□□ -1.95
CCDC144A-201ENST00000328495 DAB2P98082 770 aa2.86□□□□□ -1.95
CCDC144A-201ENST00000328495 ZNF765Q7L2R6 523 aa2.86□□□□□ -1.95
CCDC144A-201ENST00000328495 ELMO3Q96BJ8 720 aa2.86□□□□□ -1.95
CCDC144A-201ENST00000328495 ANGEL1Q9UNK9 670 aaKnown RBP2.86□□□□□ -1.95
CCDC144A-201ENST00000328495 TTBK2Q6IQ55 1244 aa2.86□□□□□ -1.95
CCDC144A-201ENST00000328495 OGFOD3Q6PK18 319 aa2.86□□□□□ -1.95
CCDC144A-201ENST00000328495 TMC4Q7Z404 712 aa2.86□□□□□ -1.95
CCDC144A-201ENST00000328495 FBXO33Q7Z6M2 555 aa2.86□□□□□ -1.95
CCDC144A-201ENST00000328495 PHF6Q8IWS0 365 aaKnown RBP eCLIP2.86□□□□□ -1.95
CCDC144A-201ENST00000328495 ISL2Q96A47 359 aa2.86□□□□□ -1.95
CCDC144A-201ENST00000328495 BCL11AQ9H165 835 aa2.86□□□□□ -1.95
CCDC144A-201ENST00000328495 MRS2Q9HD23 443 aa2.86□□□□□ -1.95
CCDC144A-201ENST00000328495 WNT11O96014 354 aa2.86□□□□□ -1.95
CCDC144A-201ENST00000328495 NEFMP07197 916 aa2.86□□□□□ -1.95
CCDC144A-201ENST00000328495 RLBP1P12271 317 aa2.86□□□□□ -1.95
CCDC144A-201ENST00000328495 HOXA10P31260 410 aaPredicted RBP2.86□□□□□ -1.95
CCDC144A-201ENST00000328495 RPS26P62854 115 aaKnown RBP2.86□□□□□ -1.95
CCDC144A-201ENST00000328495 CDK5R2Q13319 367 aa2.86□□□□□ -1.95
CCDC144A-201ENST00000328495 MSMPQ1L6U9 139 aa2.86□□□□□ -1.95
CCDC144A-201ENST00000328495 DIEXFQ68CQ4 756 aaKnown RBP2.86□□□□□ -1.95
CCDC144A-201ENST00000328495 VSIG10LQ86VR7 867 aa2.86□□□□□ -1.95
CCDC144A-201ENST00000328495 SHISA5Q8N114 240 aa2.86□□□□□ -1.95
CCDC144A-201ENST00000328495 KCT2Q8NC54 265 aa2.86□□□□□ -1.95
CCDC144A-201ENST00000328495 LRRC4CQ9HCJ2 640 aa2.86□□□□□ -1.95
CCDC144A-201ENST00000328495 BCORL1Q5H9F3 1711 aa2.85□□□□□ -1.95
CCDC144A-201ENST00000328495 ZBTB7CA1YPR0 619 aa2.85□□□□□ -1.95
CCDC144A-201ENST00000328495 DCDC2CA8MYV0 355 aa2.85□□□□□ -1.95
CCDC144A-201ENST00000328495 FANCGO15287 622 aa2.85□□□□□ -1.95
CCDC144A-201ENST00000328495 FAM87AP0C7U9 286 aa2.85□□□□□ -1.95
CCDC144A-201ENST00000328495 PPM1JQ5JR12 505 aa2.85□□□□□ -1.95
CCDC144A-201ENST00000328495 MPRIPQ6WCQ1 1025 aa2.85□□□□□ -1.95
CCDC144A-201ENST00000328495 CDC37L1Q7L3B6 337 aa2.85□□□□□ -1.95
CCDC144A-201ENST00000328495 CRELD1Q96HD1 420 aa2.85□□□□□ -1.95
CCDC144A-201ENST00000328495 RNF19AQ9NV58 838 aa2.85□□□□□ -1.95
CCDC144A-201ENST00000328495 CSADQ9Y600 493 aa2.85□□□□□ -1.95
CCDC144A-201ENST00000328495 SORBS3O60504 671 aa2.85□□□□□ -1.95
CCDC144A-201ENST00000328495 ST13P50502 369 aaKnown RBP2.85□□□□□ -1.95
CCDC144A-201ENST00000328495 GP2P55259 537 aaKnown RBP2.85□□□□□ -1.95
CCDC144A-201ENST00000328495 RASIP1Q5U651 963 aa2.85□□□□□ -1.95
CCDC144A-201ENST00000328495 HDXQ7Z353 690 aa2.85□□□□□ -1.95
CCDC144A-201ENST00000328495 GAL3ST3Q96A11 431 aa2.85□□□□□ -1.95
CCDC144A-201ENST00000328495 BSDC1Q9NW68 430 aaPredicted RBP2.85□□□□□ -1.95
CCDC144A-201ENST00000328495 PRNPP04156 253 aa2.84□□□□□ -1.95
CCDC144A-201ENST00000328495 LIG3P49916 1009 aa2.84□□□□□ -1.95
CCDC144A-201ENST00000328495 TAF1CQ15572 869 aaPredicted RBP2.84□□□□□ -1.95
CCDC144A-201ENST00000328495 ZBTB37Q5TC79 503 aa2.84□□□□□ -1.95
CCDC144A-201ENST00000328495 MEI1Q5TIA1 1274 aa2.84□□□□□ -1.95
CCDC144A-201ENST00000328495 ARHGAP27Q6ZUM4 889 aa2.84□□□□□ -1.95
CCDC144A-201ENST00000328495 C12orf40Q86WS4 652 aa2.84□□□□□ -1.95
CCDC144A-201ENST00000328495 NOC4LQ9BVI4 516 aaKnown RBP2.84□□□□□ -1.95
CCDC144A-201ENST00000328495 VTI1BQ9UEU0 232 aa2.84□□□□□ -1.95
CCDC144A-201ENST00000328495 ZNF608Q9ULD9 1512 aaPredicted RBP2.84□□□□□ -1.95
CCDC144A-201ENST00000328495 KDM5CP41229 1560 aa2.84□□□□□ -1.95
CCDC144A-201ENST00000328495 PRAMEF27A3QJZ7 478 aa2.84□□□□□ -1.95
CCDC144A-201ENST00000328495 MAP3K11Q16584 847 aa2.84□□□□□ -1.95
CCDC144A-201ENST00000328495 WIPI1Q5MNZ9 446 aaPredicted RBP2.84□□□□□ -1.95
CCDC144A-201ENST00000328495 TOP6BLQ8N6T0 577 aa2.84□□□□□ -1.95
CCDC144A-201ENST00000328495 MIR1-1HGQ9H1L0 117 aa2.84□□□□□ -1.95
CCDC144A-201ENST00000328495 RING1Q06587 406 aa2.84□□□□□ -1.96
CCDC144A-201ENST00000328495 LRFN4Q6PJG9 635 aa2.84□□□□□ -1.96
CCDC144A-201ENST00000328495 AGMOQ6ZNB7 445 aa2.84□□□□□ -1.96
CCDC144A-201ENST00000328495 ZNF507Q8TCN5 953 aa2.84□□□□□ -1.96
CCDC144A-201ENST00000328495 PLPPR2Q96GM1 343 aa2.84□□□□□ -1.96
CCDC144A-201ENST00000328495 FBXL18Q96ME1 805 aa2.84□□□□□ -1.96
CCDC144A-201ENST00000328495 FAM161BQ96MY7 647 aa2.84□□□□□ -1.96
CCDC144A-201ENST00000328495 DUSP23Q9BVJ7 150 aa2.84□□□□□ -1.96
CCDC144A-201ENST00000328495 SNCAIPQ9Y6H5 919 aa2.84□□□□□ -1.96
CCDC144A-201ENST00000328495 NTF4P34130 210 aa2.83□□□□□ -1.96
CCDC144A-201ENST00000328495 IRAK1P51617 712 aa2.83□□□□□ -1.96
CCDC144A-201ENST00000328495 SEPT6Q14141 434 aa2.83□□□□□ -1.96
CCDC144A-201ENST00000328495 ZNF326Q5BKZ1 582 aaKnown RBP2.83□□□□□ -1.96
CCDC144A-201ENST00000328495 TMCO4Q5TGY1 634 aa2.83□□□□□ -1.96
CCDC144A-201ENST00000328495 HOMEZQ8IX15 550 aa2.83□□□□□ -1.96
CCDC144A-201ENST00000328495 STK11IPQ8N1F8 1099 aa2.83□□□□□ -1.96
CCDC144A-201ENST00000328495 BCL2L13Q9BXK5 485 aa2.83□□□□□ -1.96
CCDC144A-201ENST00000328495 CCDC39Q9UFE4 941 aa2.83□□□□□ -1.96
CCDC144A-201ENST00000328495 ZC3H7BQ9UGR2 993 aaKnown RBP2.83□□□□□ -1.96
CCDC144A-201ENST00000328495 USP31Q70CQ4 1352 aa2.83□□□□□ -1.96
CCDC144A-201ENST00000328495 FER1L4A9Z1Z3 1794 aa2.83□□□□□ -1.96
CCDC144A-201ENST00000328495 ETF1P62495 437 aaKnown RBP2.83□□□□□ -1.96
CCDC144A-201ENST00000328495 PTPN11Q06124 597 aaPredicted RBP2.83□□□□□ -1.96
CCDC144A-201ENST00000328495 INPP5AQ14642 412 aa2.83□□□□□ -1.96
CCDC144A-201ENST00000328495 CYFIP1Q7L576 1253 aa2.83□□□□□ -1.96
CCDC144A-201ENST00000328495 NETO1Q8TDF5 533 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms