RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 MAPK8IP1Q9UQF2 711 aa16.28■□□□□ 0.2
CHRNA3-201ENST00000326828 PCDHB6Q9Y5E3 794 aa16.28■□□□□ 0.2
CHRNA3-201ENST00000326828 HEG1Q9ULI3 1381 aa16.28■□□□□ 0.2
CHRNA3-201ENST00000326828 CABP4P57796 275 aa16.28■□□□□ 0.2
CHRNA3-201ENST00000326828 CTDSPL2Q05D32 466 aa16.28■□□□□ 0.2
CHRNA3-201ENST00000326828 TBX2Q13207 712 aaPredicted RBP16.28■□□□□ 0.2
CHRNA3-201ENST00000326828 NUTM2AQ8IVF1 878 aaPredicted RBP16.28■□□□□ 0.2
CHRNA3-201ENST00000326828 DIS3L2Q8IYB7 885 aaKnown RBP16.28■□□□□ 0.2
CHRNA3-201ENST00000326828 RIN2Q8WYP3 895 aaPredicted RBP16.28■□□□□ 0.2
CHRNA3-201ENST00000326828 CAPZA3Q96KX2 299 aa16.28■□□□□ 0.2
CHRNA3-201ENST00000326828 ADGRG1Q9Y653 693 aa16.28■□□□□ 0.2
CHRNA3-201ENST00000326828 CTAGE9A4FU28 777 aa16.28■□□□□ 0.2
CHRNA3-201ENST00000326828 SLF1Q9BQI6 1058 aa16.28■□□□□ 0.2
CHRNA3-201ENST00000326828 TRIM10Q9UDY6 481 aa16.28■□□□□ 0.2
CHRNA3-201ENST00000326828 PPP6R2O75170 966 aa16.27■□□□□ 0.2
CHRNA3-201ENST00000326828 FKBP15Q5T1M5 1219 aa16.27■□□□□ 0.2
CHRNA3-201ENST00000326828 VPS16Q9H269 839 aa16.27■□□□□ 0.2
CHRNA3-201ENST00000326828 CDC23Q9UJX2 597 aa16.27■□□□□ 0.2
CHRNA3-201ENST00000326828 ABCC6O95255 1503 aa16.27■□□□□ 0.2
CHRNA3-201ENST00000326828 LAMA4Q16363 1823 aa16.27■□□□□ 0.2
CHRNA3-201ENST00000326828 IFIT3O14879 490 aaKnown RBP16.27■□□□□ 0.19
CHRNA3-201ENST00000326828 ERLIN1O75477 346 aa16.27■□□□□ 0.19
CHRNA3-201ENST00000326828 EIF3JO75822 258 aaKnown RBP16.27■□□□□ 0.19
CHRNA3-201ENST00000326828 BRD3Q15059 726 aa16.27■□□□□ 0.19
CHRNA3-201ENST00000326828 SYNE4Q8N205 404 aa16.27■□□□□ 0.19
CHRNA3-201ENST00000326828 CABLES1Q8TDN4 633 aa16.27■□□□□ 0.19
CHRNA3-201ENST00000326828 FAM89AQ96GI7 184 aa16.27■□□□□ 0.19
CHRNA3-201ENST00000326828 GUCA1BQ9UMX6 200 aa16.27■□□□□ 0.19
CHRNA3-201ENST00000326828 ZMYM6O95789 1325 aa16.27■□□□□ 0.19
CHRNA3-201ENST00000326828 CASP8Q14790 479 aa16.26■□□□□ 0.19
CHRNA3-201ENST00000326828 SAFBQ15424 915 aaKnown RBP eCLIP16.26■□□□□ 0.19
CHRNA3-201ENST00000326828 GPIHBP1Q8IV16 184 aa16.26■□□□□ 0.19
CHRNA3-201ENST00000326828 GSPT2Q8IYD1 628 aaKnown RBP16.26■□□□□ 0.19
CHRNA3-201ENST00000326828 EEF2KMTQ96G04 330 aa16.26■□□□□ 0.19
CHRNA3-201ENST00000326828 CABP5Q9NP86 173 aa16.26■□□□□ 0.19
CHRNA3-201ENST00000326828 UBN2Q6ZU65 1347 aa16.26■□□□□ 0.19
CHRNA3-201ENST00000326828 CDKL5O76039 1030 aa16.26■□□□□ 0.19
CHRNA3-201ENST00000326828 TATP17735 454 aaPredicted RBP16.26■□□□□ 0.19
CHRNA3-201ENST00000326828 CASP7P55210 303 aa16.26■□□□□ 0.19
CHRNA3-201ENST00000326828 PLBD2Q8NHP8 589 aa16.26■□□□□ 0.19
CHRNA3-201ENST00000326828 APPBP2Q92624 585 aa16.26■□□□□ 0.19
CHRNA3-201ENST00000326828 DDX17Q92841 729 aaKnown RBP16.26■□□□□ 0.19
CHRNA3-201ENST00000326828 EPSTI1Q96J88 318 aa16.26■□□□□ 0.19
CHRNA3-201ENST00000326828 FAM204AQ9H8W3 233 aa16.26■□□□□ 0.19
CHRNA3-201ENST00000326828 SLC12A7Q9Y666 1083 aa16.26■□□□□ 0.19
CHRNA3-201ENST00000326828 CTAGE15A4D2H0 777 aa16.26■□□□□ 0.19
CHRNA3-201ENST00000326828 FAM205CA6NFA0 338 aa16.26■□□□□ 0.19
CHRNA3-201ENST00000326828 CTAGE8P0CG41 777 aa16.26■□□□□ 0.19
CHRNA3-201ENST00000326828 FXR1P51114 621 aaKnown RBP eCLIP16.26■□□□□ 0.19
CHRNA3-201ENST00000326828 SLC20A2Q08357 652 aa16.26■□□□□ 0.19
CHRNA3-201ENST00000326828 SSRP1Q08945 709 aaKnown RBP16.26■□□□□ 0.19
CHRNA3-201ENST00000326828 CTAGE6Q86UF2 777 aa16.26■□□□□ 0.19
CHRNA3-201ENST00000326828 CTAGE4Q8IX94 777 aa16.26■□□□□ 0.19
CHRNA3-201ENST00000326828 OXER1Q8TDS5 423 aa16.26■□□□□ 0.19
CHRNA3-201ENST00000326828 NUP88Q99567 741 aaPredicted RBP16.26■□□□□ 0.19
CHRNA3-201ENST00000326828 NBPF3Q9H094 633 aa16.26■□□□□ 0.19
CHRNA3-201ENST00000326828 HDAC6Q9UBN7 1215 aa16.26■□□□□ 0.19
CHRNA3-201ENST00000326828 AKAP2Q9Y2D5 859 aa16.26■□□□□ 0.19
CHRNA3-201ENST00000326828 SRGAP2O75044 1071 aa16.25■□□□□ 0.19
CHRNA3-201ENST00000326828 NOSTRINQ8IVI9 506 aa16.25■□□□□ 0.19
CHRNA3-201ENST00000326828 KDM3BQ7LBC6 1761 aa16.25■□□□□ 0.19
CHRNA3-201ENST00000326828 SLIT1O75093 1534 aa16.25■□□□□ 0.19
CHRNA3-201ENST00000326828 LRRIQ3A6PVS8 624 aaPredicted RBP16.25■□□□□ 0.19
CHRNA3-201ENST00000326828 NBPF26B4DH59 902 aa16.25■□□□□ 0.19
CHRNA3-201ENST00000326828 PHKG2P15735 406 aa16.25■□□□□ 0.19
CHRNA3-201ENST00000326828 MRPS25P82663 173 aaKnown RBP16.25■□□□□ 0.19
CHRNA3-201ENST00000326828 NBPF14Q5TI25 921 aa16.25■□□□□ 0.19
CHRNA3-201ENST00000326828 NBPF10Q6P3W6 841 aaKnown RBP16.25■□□□□ 0.19
CHRNA3-201ENST00000326828 NBPF15Q8N660 670 aa16.25■□□□□ 0.19
CHRNA3-201ENST00000326828 GOLGA6L1Q8N7Z2 621 aa16.25■□□□□ 0.19
CHRNA3-201ENST00000326828 CSRNP2Q9H175 543 aa16.25■□□□□ 0.19
CHRNA3-201ENST00000326828 MAP2K7O14733 419 aa16.24■□□□□ 0.19
CHRNA3-201ENST00000326828 TOB1P50616 345 aaPredicted RBP16.24■□□□□ 0.19
CHRNA3-201ENST00000326828 CEP112Q8N8E3 955 aa16.24■□□□□ 0.19
CHRNA3-201ENST00000326828 DRC1Q96MC2 740 aa16.24■□□□□ 0.19
CHRNA3-201ENST00000326828 BLZF1Q9H2G9 400 aa16.24■□□□□ 0.19
CHRNA3-201ENST00000326828 RFX7Q2KHR2 1363 aa16.24■□□□□ 0.19
CHRNA3-201ENST00000326828 CD44P16070 742 aaKnown RBP16.24■□□□□ 0.19
CHRNA3-201ENST00000326828 ZNF18P17022 549 aa16.24■□□□□ 0.19
CHRNA3-201ENST00000326828 PPARDQ03181 441 aa16.24■□□□□ 0.19
CHRNA3-201ENST00000326828 LRP10Q7Z4F1 713 aa16.24■□□□□ 0.19
CHRNA3-201ENST00000326828 THEMISQ8N1K5 641 aaPredicted RBP16.24■□□□□ 0.19
CHRNA3-201ENST00000326828 MLKLQ8NB16 471 aa16.24■□□□□ 0.19
CHRNA3-201ENST00000326828 HELBQ8NG08 1087 aaPredicted RBP16.24■□□□□ 0.19
CHRNA3-201ENST00000326828 GTF2A1P52655 376 aaPredicted RBP16.24■□□□□ 0.19
CHRNA3-201ENST00000326828 NR1I3Q14994 352 aa16.24■□□□□ 0.19
CHRNA3-201ENST00000326828 METTL24Q5JXM2 366 aa16.24■□□□□ 0.19
CHRNA3-201ENST00000326828 ENOX1Q8TC92 643 aaKnown RBP16.24■□□□□ 0.19
CHRNA3-201ENST00000326828 SH2B2O14492 632 aaPredicted RBP16.23■□□□□ 0.19
CHRNA3-201ENST00000326828 N4BP3O15049 544 aa16.23■□□□□ 0.19
CHRNA3-201ENST00000326828 MDM2Q00987 491 aaPredicted RBP16.23■□□□□ 0.19
CHRNA3-201ENST00000326828 DACH1Q9UI36 760 aa16.23■□□□□ 0.19
CHRNA3-201ENST00000326828 L1RE1Q9UN81 338 aa16.23■□□□□ 0.19
CHRNA3-201ENST00000326828 MED1Q15648 1581 aaPredicted RBP16.23■□□□□ 0.19
CHRNA3-201ENST00000326828 MYH15Q9Y2K3 1946 aa16.23■□□□□ 0.19
CHRNA3-201ENST00000326828 EIF3CLB5ME19 914 aaKnown RBP16.23■□□□□ 0.19
CHRNA3-201ENST00000326828 H7C1W4 665 aa16.23■□□□□ 0.19
CHRNA3-201ENST00000326828 EIF3CQ99613 913 aaKnown RBP16.23■□□□□ 0.19
CHRNA3-201ENST00000326828 TAB2Q9NYJ8 693 aa16.23■□□□□ 0.19
CHRNA3-201ENST00000326828 CTNND2Q9UQB3 1225 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms