RNA–Protein interactions for RNA: ENST00000321407.2

GCC1-201, Transcript of GRIP and coiled-coil domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCC1, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCC1-201ENST00000321407 ZNF34Q8IZ26 560 aa16.74■□□□□ 0.27
GCC1-201ENST00000321407 CYP2D6P10635 497 aa16.74■□□□□ 0.27
GCC1-201ENST00000321407 GPSM2P81274 684 aa16.74■□□□□ 0.27
GCC1-201ENST00000321407 CALML3P27482 149 aa16.73■□□□□ 0.27
GCC1-201ENST00000321407 ZNF165P49910 485 aa16.73■□□□□ 0.27
GCC1-201ENST00000321407 CERKLQ49MI3 558 aaPredicted RBP16.73■□□□□ 0.27
GCC1-201ENST00000321407 ATG9AQ7Z3C6 839 aa16.73■□□□□ 0.27
GCC1-201ENST00000321407 PPFIBP1Q86W92 1011 aa16.73■□□□□ 0.27
GCC1-201ENST00000321407 SEPT11Q9NVA2 429 aaKnown RBP16.73■□□□□ 0.27
GCC1-201ENST00000321407 ANO10Q9NW15 660 aa16.73■□□□□ 0.27
GCC1-201ENST00000321407 CHMP2AO43633 222 aa16.73■□□□□ 0.27
GCC1-201ENST00000321407 DDX19AQ9NUU7 478 aaKnown RBP16.73■□□□□ 0.27
GCC1-201ENST00000321407 TCERG1LQ5VWI1 586 aa16.73■□□□□ 0.27
GCC1-201ENST00000321407 MRPS27Q92552 414 aaKnown RBP16.73■□□□□ 0.27
GCC1-201ENST00000321407 TAOK3Q9H2K8 898 aa16.73■□□□□ 0.27
GCC1-201ENST00000321407 TDRD3Q9H7E2 651 aaKnown RBP16.73■□□□□ 0.27
GCC1-201ENST00000321407 EHMT1Q9H9B1 1298 aa16.73■□□□□ 0.27
GCC1-201ENST00000321407 UBN2Q6ZU65 1347 aa16.73■□□□□ 0.27
GCC1-201ENST00000321407 KDM6AO15550 1401 aaPredicted RBP16.73■□□□□ 0.27
GCC1-201ENST00000321407 TBC1D10BQ4KMP7 808 aaPredicted RBP16.72■□□□□ 0.27
GCC1-201ENST00000321407 KRT40Q6A162 431 aa16.72■□□□□ 0.27
GCC1-201ENST00000321407 SLC44A5Q8NCS7 719 aa16.72■□□□□ 0.27
GCC1-201ENST00000321407 GPKOWQ92917 476 aaPredicted RBP eCLIP16.72■□□□□ 0.27
GCC1-201ENST00000321407 INTS4Q96HW7 963 aaKnown RBP16.72■□□□□ 0.27
GCC1-201ENST00000321407 NCOA3Q9Y6Q9 1424 aa16.72■□□□□ 0.27
GCC1-201ENST00000321407 ITSN1Q15811 1721 aa16.72■□□□□ 0.27
GCC1-201ENST00000321407 GNA11P29992 359 aa16.72■□□□□ 0.27
GCC1-201ENST00000321407 REREQ9P2R6 1566 aa16.72■□□□□ 0.27
GCC1-201ENST00000321407 SULF1Q8IWU6 871 aa16.72■□□□□ 0.27
GCC1-201ENST00000321407 KCNG4Q8TDN1 519 aa16.72■□□□□ 0.27
GCC1-201ENST00000321407 COL5A2P05997 1499 aaPredicted RBP16.72■□□□□ 0.27
GCC1-201ENST00000321407 DEXIO95424 95 aa16.72■□□□□ 0.27
GCC1-201ENST00000321407 STAT6P42226 847 aa16.72■□□□□ 0.27
GCC1-201ENST00000321407 SMARCE1Q969G3 411 aa16.72■□□□□ 0.27
GCC1-201ENST00000321407 PAGR1Q9BTK6 254 aa16.72■□□□□ 0.27
GCC1-201ENST00000321407 ICA1Q05084 483 aa16.71■□□□□ 0.27
GCC1-201ENST00000321407 MKRN3Q13064 507 aaKnown RBP16.71■□□□□ 0.27
GCC1-201ENST00000321407 FAM84BQ96KN1 310 aaPredicted RBP16.71■□□□□ 0.27
GCC1-201ENST00000321407 ZSCAN10Q96SZ4 725 aaPredicted RBP16.71■□□□□ 0.27
GCC1-201ENST00000321407 MXD3Q9BW11 206 aa16.71■□□□□ 0.27
GCC1-201ENST00000321407 RIPOR2Q9Y4F9 1068 aa16.71■□□□□ 0.27
GCC1-201ENST00000321407 CDHR2Q9BYE9 1310 aa16.71■□□□□ 0.27
GCC1-201ENST00000321407 ZSCAN23Q3MJ62 389 aa16.71■□□□□ 0.27
GCC1-201ENST00000321407 ERCC4Q92889 916 aaPredicted RBP16.71■□□□□ 0.27
GCC1-201ENST00000321407 DEF6Q9H4E7 631 aa16.71■□□□□ 0.27
GCC1-201ENST00000321407 MAP7D2Q96T17 732 aa16.71■□□□□ 0.26
GCC1-201ENST00000321407 BRIP1Q9BX63 1249 aa16.71■□□□□ 0.26
GCC1-201ENST00000321407 MMRN2Q9H8L6 949 aa16.71■□□□□ 0.26
GCC1-201ENST00000321407 USP17L3A6NCW0 530 aa16.7■□□□□ 0.26
GCC1-201ENST00000321407 USP17L4A6NCW7 530 aa16.7■□□□□ 0.26
GCC1-201ENST00000321407 NTSR2O95665 410 aa16.7■□□□□ 0.26
GCC1-201ENST00000321407 NOM1Q5C9Z4 860 aaKnown RBP16.7■□□□□ 0.26
GCC1-201ENST00000321407 USP17L1Q7RTZ2 530 aa16.7■□□□□ 0.26
GCC1-201ENST00000321407 STAMQ92783 540 aa16.7■□□□□ 0.26
GCC1-201ENST00000321407 KIF13AQ9H1H9 1805 aa16.7■□□□□ 0.26
GCC1-201ENST00000321407 UBR1Q8IWV7 1749 aa16.7■□□□□ 0.26
GCC1-201ENST00000321407 DDX39AO00148 427 aaKnown RBP16.7■□□□□ 0.26
GCC1-201ENST00000321407 MYCLP12524 364 aaPredicted RBP16.7■□□□□ 0.26
GCC1-201ENST00000321407 ARID4AP29374 1257 aaPredicted RBP16.7■□□□□ 0.26
GCC1-201ENST00000321407 PPP4R3BQ5MIZ7 849 aa16.7■□□□□ 0.26
GCC1-201ENST00000321407 TMOD4Q9NZQ9 345 aa16.7■□□□□ 0.26
GCC1-201ENST00000321407 STX17P56962 302 aa16.7■□□□□ 0.26
GCC1-201ENST00000321407 WWC2Q6AWC2 1192 aa16.7■□□□□ 0.26
GCC1-201ENST00000321407 CIAPIN1Q6FI81 312 aa16.7■□□□□ 0.26
GCC1-201ENST00000321407 COL23A1Q86Y22 540 aaPredicted RBP16.7■□□□□ 0.26
GCC1-201ENST00000321407 TNFAIP1Q13829 316 aa16.69■□□□□ 0.26
GCC1-201ENST00000321407 FANCBQ8NB91 859 aa16.69■□□□□ 0.26
GCC1-201ENST00000321407 ZSWIM6Q9HCJ5 1215 aa16.69■□□□□ 0.26
GCC1-201ENST00000321407 RBM28Q9NW13 759 aaKnown RBP16.69■□□□□ 0.26
GCC1-201ENST00000321407 KLRF2D3W0D1 207 aa16.69■□□□□ 0.26
GCC1-201ENST00000321407 ASIC1P78348 528 aa16.69■□□□□ 0.26
GCC1-201ENST00000321407 SH3RF3Q8TEJ3 882 aaPredicted RBP16.69■□□□□ 0.26
GCC1-201ENST00000321407 SLC4A9Q96Q91 983 aa16.69■□□□□ 0.26
GCC1-201ENST00000321407 ZMYND15Q9H091 742 aa16.69■□□□□ 0.26
GCC1-201ENST00000321407 SERPINB13Q9UIV8 391 aa16.69■□□□□ 0.26
GCC1-201ENST00000321407 ZBTB12Q9Y330 459 aaPredicted RBP16.69■□□□□ 0.26
GCC1-201ENST00000321407 SLC16A2P36021 539 aa16.69■□□□□ 0.26
GCC1-201ENST00000321407 TXKP42681 527 aa16.69■□□□□ 0.26
GCC1-201ENST00000321407 MRPL12P52815 198 aaKnown RBP16.69■□□□□ 0.26
GCC1-201ENST00000321407 VTI1AQ96AJ9 217 aa16.69■□□□□ 0.26
GCC1-201ENST00000321407 SH2D4AQ9H788 454 aa16.69■□□□□ 0.26
GCC1-201ENST00000321407 ATP8A2Q9NTI2 1148 aa16.69■□□□□ 0.26
GCC1-201ENST00000321407 RABL6Q3YEC7 729 aaPredicted RBP16.68■□□□□ 0.26
GCC1-201ENST00000321407 RC3H1Q5TC82 1133 aaKnown RBP16.68■□□□□ 0.26
GCC1-201ENST00000321407 CC2D2BQ6DHV5 1058 aa16.68■□□□□ 0.26
GCC1-201ENST00000321407 GTF3C6Q969F1 213 aa16.68■□□□□ 0.26
GCC1-201ENST00000321407 TM6SF1Q9BZW5 370 aa16.68■□□□□ 0.26
GCC1-201ENST00000321407 DNAJC25Q9H1X3 360 aa16.68■□□□□ 0.26
GCC1-201ENST00000321407 SORBS3O60504 671 aa16.68■□□□□ 0.26
GCC1-201ENST00000321407 SLC15A2Q16348 729 aa16.68■□□□□ 0.26
GCC1-201ENST00000321407 STRBPQ96SI9 672 aaKnown RBP16.68■□□□□ 0.26
GCC1-201ENST00000321407 COA1Q9GZY4 146 aa16.68■□□□□ 0.26
GCC1-201ENST00000321407 CPVLQ9H3G5 476 aa16.68■□□□□ 0.26
GCC1-201ENST00000321407 ZSWIM5Q9P217 1185 aa16.68■□□□□ 0.26
GCC1-201ENST00000321407 BACH1O14867 736 aa16.68■□□□□ 0.26
GCC1-201ENST00000321407 ECE2O60344 883 aa16.68■□□□□ 0.26
GCC1-201ENST00000321407 KAZALD1Q96I82 304 aa16.68■□□□□ 0.26
GCC1-201ENST00000321407 USP42Q9H9J4 1324 aaKnown RBP16.68■□□□□ 0.26
GCC1-201ENST00000321407 SEMA3EO15041 775 aa16.68■□□□□ 0.26
GCC1-201ENST00000321407 SYCP1Q15431 976 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms